Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0018
(702 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 6e-13
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 69 3e-12
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 68 7e-12
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 68 7e-12
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 66 2e-11
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 9e-11
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 64 1e-10
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 64 1e-10
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 62 3e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 62 5e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 61 6e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 61 8e-10
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 61 8e-10
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 58 6e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 6e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 7e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 2e-07
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 51 6e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 1e-06
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 48 5e-06
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 48 8e-06
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 47 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 46 3e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 46 3e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 45 6e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 6e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 44 1e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 44 1e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 43 2e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 3e-04
At5g61340.1 68418.m07697 expressed protein 42 5e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 42 5e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 41 0.001
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 41 0.001
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.002
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.002
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 40 0.002
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 39 0.004
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 38 0.006
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.009
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.009
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 38 0.009
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.009
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 37 0.011
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 37 0.015
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 37 0.015
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 36 0.026
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.034
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.034
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.079
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.14
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.14
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 32 0.32
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 32 0.32
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 32 0.32
At3g03860.1 68416.m00398 expressed protein 32 0.42
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 32 0.42
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 3.0
At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 28 5.2
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 28 5.2
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 28 5.2
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 28 5.2
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 28 5.2
At4g31240.2 68417.m04435 expressed protein 28 6.9
At4g31240.1 68417.m04434 expressed protein 28 6.9
At1g78740.1 68414.m09177 hypothetical protein 27 9.1
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 27 9.1
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +3
Query: 54 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 233
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 234 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 68.9 bits (161), Expect = 3e-12
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +3
Query: 51 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 224
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDVD 99
Query: 225 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 332
E+N++++P VF+K G+++D G VD
Sbjct: 100 VLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 67.7 bits (158), Expect = 7e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +3
Query: 45 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 224
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 225 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +3
Query: 87 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 266
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 267 MPTFVFVKNGKKLDEFSGA 323
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 281
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 282 FVKNGKKLDEFSGANVD 332
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 64.1 bits (149), Expect = 9e-11
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +3
Query: 51 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 230
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 231 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +3
Query: 45 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 224
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 225 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 332
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 281
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 282 FVKNGKKLDEFSGA 323
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +3
Query: 63 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 242
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 243 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 332
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 93 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 272
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 273 TFVFVKNGKKLDEFSGANVD 332
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 78 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 257
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 258 INSMPTFVFVKNGKKLDEFSGANVD 332
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 54 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 233
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 234 XXXASEYNINSMPTFVFVKNGKKLDEFSGA 323
A+ Y I S+PT + K G+K D GA
Sbjct: 148 PNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +3
Query: 63 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 242
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 243 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 332
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +3
Query: 78 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 257
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 258 INSMPTFVFVKNGKKLDEFSGA 323
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +3
Query: 66 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 245
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 246 SEYNINSMPTFVFVKNGKKLDEFSGA 323
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 291 NGKKLDEFSGA 323
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 291 NGKKLDEFSG 320
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 51.2 bits (117), Expect = 6e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 291 NGKKL 305
+GK++
Sbjct: 150 DGKEV 154
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 39 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 188
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 48.4 bits (110), Expect = 5e-06
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 36 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 215
KP M + DL L AGDKLVV+DF + CG CK + PK+ +I AE
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQ 149
Query: 216 XXXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFSGAN 326
NI+ +P F F + ++ FS N
Sbjct: 150 VNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 90 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 269
A + K++V++F A+WC P K I P E+A+ + E+N+++
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSMIFVTIDVEELAEFSHEWNVDAT 116
Query: 270 PTFVFVKNGKKLDEFSGAN 326
PT VF+K+G+++D+ G +
Sbjct: 117 PTVVFLKDGRQMDKLVGGD 135
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 57 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 230
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 231 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 329
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 39 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 218
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 219 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 317
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 39 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 218
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 219 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 317
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 57 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 230
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 231 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 329
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 57 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 236
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 237 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 326
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 51 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 230
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 231 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 317
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 129 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 308
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 309 EFSGA 323
+ GA
Sbjct: 76 KLVGA 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 99 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 272
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 273 TFVFV 287
T F+
Sbjct: 151 TLFFI 155
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 291 NGKKLDEFSGANVD 332
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = -2
Query: 497 KLISSN-SLQTLKTFFIHLLKTYTC-FFFLIPS*FPSAAAYNFSLYLLVFKDSCFEFVDV 324
KL+S+N S + F++ LLKTY C FFFL+ SA A F+L+ L + + E
Sbjct: 108 KLLSNNHSADSSSVFYLRLLKTYVCNFFFLL-----SANASAFALFFLAY--NTLEAFGF 160
Query: 323 SAREFVQFLAI 291
S+R F FL++
Sbjct: 161 SSRNFYTFLSL 171
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 275
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 276 FVFVKN-GKKLDEFSG 320
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +3
Query: 36 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 182
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 108 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 287
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 288 KNGKKLDEFSGA 323
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 36 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 209
+P S+ + S DDL ++L +++F A WCG CK + P+ A +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Query: 210 XXXXXXXXXXXASEYNINSMPTFV 281
S + + PT +
Sbjct: 216 GHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 291 NGKKLDEFSGAN 326
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 275
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 276 F-VFVKNGKKLDEFSG 320
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 66 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 182
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 275
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 276 F-VFVKNGKKLDEFSG 320
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 66 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 182
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +3
Query: 108 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 287
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 288 KNGKKLDEFSGA 323
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +3
Query: 36 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 209
+P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Query: 210 XXXXXXXXXXXASEYNINSMPTFVFVKNGK 299
S + + PT + + K
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 281
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 282 FVKNGKKLDEFSGANVD 332
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 287
VVI +MA WC C + PKL+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 288 KNGKKLDEFSGAN 326
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 278
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 279 VFVKNGK 299
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 284
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 285 VKNGKKLDE 311
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 278
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 279 VFVKNGK 299
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 284
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 285 VKNGKKLDE 311
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 287
++I++MA+WC C + PKL+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 288 KNGKKLDEFSGAN 326
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 111 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 290
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 291 NGKKLDEFSGAN 326
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 99 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 269
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 270 PTFVFVKNGKKLDEFSGA 323
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 281
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 282 FVKNGKKLDEFSG 320
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 69 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXAS 248
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 249 EYNINSMPTFVFVKNGKKLDEFSGA 323
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.9 bits (79), Expect = 0.026
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 45 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 218
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 219 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 326
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 275
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 276 F-VFVKNGKKLDEFSG 320
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.060
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAA 185
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 275
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 276 F-VFVKNGKKLDEFSG 320
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.060
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 102 DKLVVIDFMATWCGPCKMIGPKLDEIAA 185
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.079
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 54 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 179
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 191
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 60 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 212
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 213 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 317
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 60 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 212
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 213 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 317
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 117 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 290
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 291 NGKKLDEFSG 320
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 117 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 290
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 291 NGKKLDEFSG 320
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 117 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 290
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 291 NGKKLDEFSG 320
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 63 DSDDLKTRLA-EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXX 239
D D L +A + G+ + + F A+WC + + PK D +++
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPS 119
Query: 240 XASEYNINSMPTFVFV 287
S Y I+S+P+ + V
Sbjct: 120 VFSRYGIHSLPSILMV 135
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +3
Query: 84 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 263
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 264 SMPTFVFVKNGKKLDEFSGANV 329
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 60 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 158
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 277
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 542 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 450
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 60 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 90
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 542 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 450
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 542 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 450
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 415 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 525
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 415 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 525
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKL 170
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 105 KLVVIDFMATWCGPCKMIGPKL 170
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 370 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 269
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 99 GDKLVVIDFMATWCGPCKMIGPKLDEIAA---EMXXXXXXXXXXXXXXXXXASEYNINSM 269
G++ V++ A WC + P+ E A E+ ASE I
Sbjct: 93 GNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELEIKGF 152
Query: 270 PTFVFVKNGKKLDEFSGANVD 332
PT + NG L G++ +
Sbjct: 153 PTLLLFVNGTSLTYNGGSSAE 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,519,948
Number of Sequences: 28952
Number of extensions: 251214
Number of successful extensions: 782
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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