Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A22
(1121 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g61080.1 68414.m06877 proline-rich family protein 34 0.15
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 34 0.20
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 33 0.34
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 33 0.34
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 33 0.45
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 32 0.60
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 32 0.60
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 32 0.79
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.8
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 30 2.4
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 30 2.4
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 30 3.2
At5g62640.1 68418.m07862 proline-rich family protein contains pr... 29 4.2
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 29 4.2
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 29 5.6
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 7.4
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 7.4
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 29 7.4
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 7.4
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 7.4
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 9.8
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 9.8
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 28 9.8
At3g05920.1 68416.m00668 heavy-metal-associated domain-containin... 28 9.8
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 34.3 bits (75), Expect = 0.15
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
P RA PPPP P PPPP P P PP P
Sbjct: 528 PPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMP 581
Score = 33.9 bits (74), Expect = 0.20
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 394 AXPPPPXPXXXXXXXXXXXXXXAFRXXXP-PPPRPPXRXXPGGPPRPXP 537
A PPPP P + P PPP P GGPP P P
Sbjct: 547 AAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPP 595
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP PP P P
Sbjct: 510 PPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPPPPPP 555
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP G P P P
Sbjct: 564 PPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPP 609
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P A PPPP PP PP P P
Sbjct: 512 PPPPLPTTIAAPPPPPPPPRA-AVAPPPPPPPPGTAAAPPPPPPPP 556
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPR--PPXRXXPGGPPRPXP 537
PPPP P PPPP+ PP + P PP+P P
Sbjct: 63 PPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQP 110
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 33.1 bits (72), Expect = 0.34
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPP--PRPPXRXXPGGPPRPXP 537
PPPP P F PPP P PP P PP P P
Sbjct: 1079 PPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPPPP 1126
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 33.1 bits (72), Expect = 0.34
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
P R R PPPP P R PPPP PP R PP P P
Sbjct: 15 PPMRGRVPLPPPPPPPPPPMRR----------RAPLPPPPPPPMRRRAPLPPPPPP 60
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPP----XRXXPGGPPRPXP 537
PPPP P R P PP PP R P PP P P
Sbjct: 27 PPPPPPPMRRRAPLPPPPPPPMRRRAPLPPPPPPAMRRRVLPRPPPPPPP 76
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 32.7 bits (71), Expect = 0.45
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPP 525
PPPP P + PPPP PP P PP
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPP 430
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 379 PPPPPPPPPPPPPPPPPPPP 398
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 380 PPPPPPPPPPPPPPPPPPPP 399
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 381 PPPPPPPPPPPPPPPPPPPP 400
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 382 PPPPPPPPPPPPPPPPPPPP 401
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 383 PPPPPPPPPPPPPPPPPPPP 402
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 384 PPPPPPPPPPPPPPPPPPPP 403
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 385 PPPPPPPPPPPPPPPPPPPP 404
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 386 PPPPPPPPPPPPPPPPPPPP 405
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 387 PPPPPPPPPPPPPPPPPPPP 406
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 388 PPPPPPPPPPPPPPPPPPPP 407
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXP-GGPPR 528
P R PPPP P R PPPP PP P PP+
Sbjct: 20 PPLMRRRAPLPPPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPPPLPRPCSRPPK 73
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP R PPPP PP PP P P
Sbjct: 17 PPPPPLMRRRAPLPPPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPP 62
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP R PPPP P R PP P P
Sbjct: 18 PPPPLMRRRAPLPPPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPPP 63
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXR--XXPGGPPRPXP 537
PPPP P R PPPP P R P PP P P
Sbjct: 576 PPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPP 623
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 379 RARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
R + PPPP P A PPP PP G PP P P
Sbjct: 673 RVGPPSTPPPPPPPPPKANISNAPKPPA------PPPLPPSSTRLGAPPPPPP 719
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPP 525
P + R A PPPP P + PPPP R GPP
Sbjct: 705 PPSSTRLGAPPPPPPPPLSKTPAPPPPPLS--KTPVPPPPPGLGRGTSSGPP 754
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRP 531
PPPP PP P PP P
Sbjct: 715 PPPPPPPLSKTPAPPPPP 732
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 31.9 bits (69), Expect = 0.79
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
P A + PPPP P PPPP PP + G PP P
Sbjct: 375 PPGPANQTSPPPPPPPSAAAPPPPPPPKKGP---AAPPPPPPPGKKGAGPPPPP 425
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 394 AXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPP 525
A PPPP P + PPPP P + P PP
Sbjct: 393 AAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKKGPPKPP 436
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 481 PPPRPPXRXXPGGPPRPXP 537
PPP PP + P PP P P
Sbjct: 395 PPPPPPPKKGPAAPPPPPP 413
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PP P P + PPPP PP PP P P
Sbjct: 428 PPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPP 473
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
P PP P PPPP PP P PP P P
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPP 474
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P + PPPP PP P PP P P
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPS-----PPPPPPPVYSPPPPPPPPPP 506
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 456 PPPPPPPVYSPPPPPPPPPP 475
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = +1
Query: 478 PPPPRPPXRXXPGG--PPRP 531
PPPPRP PGG PPRP
Sbjct: 229 PPPPRPGMPPAPGGFAPPRP 248
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = +1
Query: 478 PPPPRPPXRXXPGG--PPRP 531
PPPPRP PGG PPRP
Sbjct: 229 PPPPRPGMPPAPGGFAPPRP 248
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 463 FRXXXPPPPRPPXRXXPGGPPRPXP 537
F PPPP PP P PP P P
Sbjct: 38 FPQSPPPPPPPPPPPPPPPPPPPPP 62
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 44 PPPPPPPPPPPPPPPPPPPP 63
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 45 PPPPPPPPPPPPPPPPPPPP 64
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRP 531
PPPP+PP R P PP+P
Sbjct: 91 PPPPQPPPRSQP--PPKP 106
>At5g62640.1 68418.m07862 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 520
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAF-RXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P R PPP PP P PP P P
Sbjct: 356 PPPPPPLDMHPPHPGMFVGHLIPRPPYGPPPGPPPMMRPPLPPGPPP 402
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 400 PPPPX--PXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
PPPP P + R PPPP P P PP P
Sbjct: 298 PPPPLTSPQTPSPTVSTFNTKSSLRSQPPPPPPSPEHKAPAPPPPP 343
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P GP P P
Sbjct: 26 PPPPPPPPPQLPFGPKLPFP 45
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +1
Query: 478 PPPPRP-PXRXXPGGPPRPXP 537
PPPP P P GPPRP P
Sbjct: 370 PPPPVPAPQMPSSAGPPRPPP 390
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +1
Query: 478 PPPPRP-PXRXXPGGPPRPXP 537
PPPP P P GPPRP P
Sbjct: 370 PPPPVPAPQMPSSAGPPRPPP 390
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPR 528
P R R PPPP P PPPP PP P G R
Sbjct: 15 PPMRGRVPLPPPPPPPMRRSAPSPPPMSGRV-----PPPPPPPPMFDPKGAGR 62
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPP 525
PPPP P R PPPP PP PP
Sbjct: 126 PPPPPPTITPPVTTTTAGHHHHRRSPPPPPPPPPPPPTITPP 167
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
P + + PPPP P + PPPP PP P P P
Sbjct: 36 PPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPPPSAPPPLVPDPP 89
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
PPPP P A + P PP PP P P
Sbjct: 729 PPPPPPPPPAPPTPQSNGISAMKSSPPAPPAPPRLPTHSASPPP 772
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 466 RXXXPPPPR--PPXRXXPGGPPRPXP 537
R PPPP PP + P PP+P P
Sbjct: 262 RSAPPPPPAAAPPPQPPPPPPPKPQP 287
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 5/25 (20%)
Frame = +1
Query: 478 PPPPRPPXRXXP-----GGPPRPXP 537
PPPP PP P GGPP P P
Sbjct: 679 PPPPPPPPGGGPPPPPGGGPPPPPP 703
>At3g05920.1 68416.m00668 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 126
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
P PP+PP P PP P P
Sbjct: 77 PEPPKPPEPEKPKPPPAPEP 96
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.150 0.567
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,193,169
Number of Sequences: 28952
Number of extensions: 104200
Number of successful extensions: 1162
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2821680336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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