Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A16
(934 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 40 0.002
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 39 0.004
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.20
At4g01985.1 68417.m00265 expressed protein 32 0.47
At2g33790.1 68415.m04144 pollen Ole e 1 allergen and extensin fa... 32 0.47
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 32 0.47
At5g46730.1 68418.m05757 glycine-rich protein 32 0.63
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 0.83
At1g23540.1 68414.m02960 protein kinase family protein contains ... 31 1.1
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 30 1.9
At5g56890.1 68418.m07099 protein kinase family protein contains ... 30 2.5
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 3.3
At2g15780.1 68415.m01809 glycine-rich protein similar to Blue co... 29 3.3
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 3.3
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 4.4
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 4.4
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 29 4.4
At1g74240.1 68414.m08598 mitochondrial substrate carrier family ... 29 4.4
At3g55480.2 68416.m06162 adaptin family protein similar to AP-3 ... 29 5.8
At3g55480.1 68416.m06161 adaptin family protein similar to AP-3 ... 29 5.8
At5g61660.1 68418.m07736 glycine-rich protein 28 7.7
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 28 7.7
At4g30450.1 68417.m04324 glycine-rich protein 28 7.7
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 7.7
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 28 7.7
At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 7.7
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 7.7
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQG-EVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
G G G GA+ G G + G + G GH + GG G AG + G GG +AG G
Sbjct: 271 GKGAGGGAKGGPGNQNQGGGKNGGGGHPQDGKNGGGGGGPNAGKK-GNGGGGPMAGGVSG 329
Query: 623 IFIVRXGFATSDLSVDFCDARSGGRXPMEKAPATR 519
F G ++S+ + G PM PA +
Sbjct: 330 GFRPMGGGGPQNMSMPM-GGQMGMGGPMGNMPAVQ 363
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/77 (32%), Positives = 31/77 (40%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
PP +A K K V P V P PP + P S PA+ P P + +A
Sbjct: 146 PPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVK 205
Query: 733 PXTSPCTXLXPTPXLAP 783
P SP T TP + P
Sbjct: 206 PPVSPPTKPPVTPPVYP 222
Score = 35.9 bits (79), Expect = 0.038
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
PP +A K K V P P V P PP ++P P + P P + +A
Sbjct: 94 PPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVK 153
Query: 733 PXTSP 747
P T P
Sbjct: 154 PPTKP 158
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = +1
Query: 499 ARNP*KGRVAGAFSIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDP 678
A+ P K V ++PP + K + P + P V P PP ++P P
Sbjct: 116 AKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPP 175
Query: 679 ARLPDTCPPFSLREAXPL-PXTSPCTXLXPTPXLAP 783
+ P PP S P+ P P T P ++P
Sbjct: 176 TK-PPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSP 210
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +1
Query: 547 LRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAX 726
++PP +A K V P V P PP + P S PA+ P P + +A
Sbjct: 72 VKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAP 131
Query: 727 PLPXTSP 747
P T P
Sbjct: 132 VKPPTKP 138
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/77 (24%), Positives = 28/77 (36%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
PP + K + P + P V P PP ++P P + P P + +A
Sbjct: 114 PPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVK 173
Query: 733 PXTSPCTXLXPTPXLAP 783
P T P +P P
Sbjct: 174 PPTKPPVKPPVSPPAKP 190
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +1
Query: 499 ARNP*KGRVAGAFSIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDP 678
A++P K V S +PP + K+ V P + P V P PP + P P
Sbjct: 68 AKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPP 127
Query: 679 ARLPDTCPPFSLREAXPLPXTSPCTXLXPT-PXLAP 783
+ P PP P+ + PT P + P
Sbjct: 128 TKAP-VKPPTKPPVKPPVYPPTKAPVKPPTKPPVKP 162
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = +1
Query: 619 KIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
KI G PP SP S P+ T PP A P P P T PTP +P
Sbjct: 33 KIIGGSETTQPPATSPPSPPSPDTQTSPP-PATAAQPPPNQPPNTTPPPTPPSSP 86
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGH--ASRREKGGQVSGKRAGSEXGERQGGSLAGXTP 627
G G G G G G R G G G A R GG G G G GGS+ G
Sbjct: 194 GIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVGVGGGAGGSGGGSVGGGGR 253
Query: 626 G 624
G
Sbjct: 254 G 254
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAG 636
G G G GA G+G G G G + GG V G G+ G GG+ G
Sbjct: 50 GAGAGGGASGGIGVGGGGGGGGGIGGSGGVGAGGGVGGGAGGAIGGGASGGAGGG 104
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRX---VQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXT 630
G G G G GVG V G V G G S GG+ SG +G G GG+ G +
Sbjct: 347 GGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGG-GGRGSGGASGGASGGASGGASGGAS 405
Query: 629 PG 624
G
Sbjct: 406 GG 407
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXG-HASRREKGGQVSGKRAGSEXGERQGG 648
G G G G G G R G G G + R GG G AG G GG
Sbjct: 499 GVGGGVGGGVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGG 550
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
G G G GA G G G G G GG+ SG +G GG +G G
Sbjct: 174 GVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASG 232
>At2g33790.1 68415.m04144 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245, SP|Q03211 Pistil-specific
extensin-like protein precursor (PELP) {Nicotiana
tabacum}; contains Pfam profile PF01190: Pollen proteins
Ole e I family
Length = 239
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 526 AGAFSIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLP---PCRSPXSDPARLPDT 696
+ F++G+ P + +L + P IK+P + PAK P P P P +LP T
Sbjct: 20 SSVFTLGVNQPGSSDPFHSLPQHLPLPP--IKLPTLPPAKAPIKLPAYPPAKAPIKLP-T 76
Query: 697 CPPFSLREAXP-LPXTSP 747
PP P LP P
Sbjct: 77 LPPAKAPIKLPTLPPIKP 94
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 625 PGVXPAKLP-PCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
P PA P PC SP PA P PP P P +P P+P AP
Sbjct: 87 PAPPPAPKPVPCPSPPKPPAPTPKPVPPHG-----PPPKPAPAPTPAPSPKPAP 135
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
G G G G G G G G G+ S +GG G AG G GG G + G
Sbjct: 208 GYGGGGGGGSGGGGAYGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYG 266
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = -3
Query: 800 GXGWGXGARXGV--GXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTP 627
G G+G G+ G G +G G G GG S S GE GG G
Sbjct: 58 GGGYGGGSGEGAGGGYGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAG 117
Query: 626 G 624
G
Sbjct: 118 G 118
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 613 TIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXT-SPCTXLXPTPXLAP 783
T + P+ P SP S P+ P + PP SL + P P + SP + P P +P
Sbjct: 21 TTSSSSLSPSSSSPSLSP-SPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSP 77
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXP-AKLPPCRSPXSDPARLPDTCPPFSLREAXP 729
PP S S ++ P P + L P SP S P+ P + PP SL + P
Sbjct: 49 PPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSP-SPPSSSPSSAPPSSLSPSSP 107
Query: 730 LPXT-SPCTXLXPTPXLAP 783
P + SP + P P +P
Sbjct: 108 PPLSLSPSSPPPPPPSSSP 126
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 553 PPERASQKSTLKSE-VAKPXRTIKIPGVXPA--KLPPCRSPXSDPARLPDTCPPFSLREA 723
PP ++ + S+ + P + P V P + PP +SP + PA P PP A
Sbjct: 115 PPNESNDNNPPPSQDLQSPPPSSPSPNVGPTNPESPPLQSPPAPPASDPTNSPP-----A 169
Query: 724 XPLPXTSPCTXLXPTPXLAP 783
PL T+P P +P
Sbjct: 170 SPLDPTNPPPIQPSGPATSP 189
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 532 AFSIGLRPPERASQKSTLKSEVA-KPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCP-P 705
A + L PE A + ++ + VA P + + P ++PP R+P + P +P CP P
Sbjct: 56 ASKVKLLSPEEAMKLTSGGNGVAVSPVKPARATSQVPKRVPPSRTPEA-PRSVP-ACPIP 113
Query: 706 FSLR--EAXPLPXTSPCTXLXPTPXL 777
R A P P T PTP +
Sbjct: 114 EIPRPVPARPTPETPRPVTARPTPEI 139
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 622 IPGVXPAKLPPCRSPXSDPARLPDTCP---PFSLREAXPLPXTSPCTXLXPTPXLA 780
+P P L P S P +P P PFS R P P +SP + + P P +A
Sbjct: 114 LPVASPPVLQPITPIASPPRFIPGDAPKEPPFSGR-VTPAPVSSPVSDIPPIPSVA 168
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 550 RPPERASQKSTLKSEVAKPXR-TIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAX 726
+PP + +++ KP T+K P P K PP P P P T P
Sbjct: 108 KPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVK-PPTTPPVQSPPVQPPTYKP-PTSPVK 165
Query: 727 PLPXTSPCTXLXPTPXLAP 783
P T P TP + P
Sbjct: 166 PPTTTPPVKPPTTTPPVQP 184
>At2g15780.1 68415.m01809 glycine-rich protein similar to Blue
copper protein precursor (SP:Q41001) {Pisum sativum};
contains a Pfam PF02298: Plastocyanin-like domain
related to blue copper-binding protein; contains a
domain related to blue copper-binding protein
Length = 257
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -3
Query: 806 SPGXGWGXG-ARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAG 636
+PG GWG G +R G G G V H+S GG G + GGS +G
Sbjct: 69 TPGSGWGFGSSRNGSGWGWGWGGVPNNTHSS--GSGGSGWGMGPNNNYSSGSGGSGSG 124
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +1
Query: 625 PGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTP 771
P + PA PP + P S PA P PP P P + P T P P
Sbjct: 89 PVISPATPPP-QPPQSPPASAPTVSPP--PVSPPPAPTSPPPTPASPPP 134
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +1
Query: 625 PGVXPAKLPPCRSPXSDPARLPDT--CPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
P P PP SP P P T PP + P P + P + P P AP
Sbjct: 105 PASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQAP 159
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Frame = +1
Query: 583 LKSEVAKPXRTIKIPGVXPAK--LPPCRSPXSDPARL---PDTCPPFSLREAXPLPXTSP 747
LK P + P + P +P +P P L P + PP L P T P
Sbjct: 255 LKPNFFFPPNPLNPPSIIPPNPLIPSIPTPTLPPNPLIPSPPSLPPIPLIPTPPTLPTIP 314
Query: 748 CTXLXPTPXLAP 783
PTP L P
Sbjct: 315 LLPTPPTPTLPP 326
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Frame = +1
Query: 538 SIGLRP-PERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSD--------PARLP 690
S G P P S + + P + P P+ PP S S P LP
Sbjct: 6 SPGTTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLP 65
Query: 691 DTCPPFSLREAXPLPXTSPCTXLXPTP 771
PP SL PLP SP + P+P
Sbjct: 66 PPSPPGSL--TPPLPQPSPSAPITPSP 90
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +1
Query: 547 LRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAX 726
++PP+ + K K KP T K P V P PP P P + P +++
Sbjct: 44 VKPPKPPAVKPP-KPPAVKPP-TPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPH 101
Query: 727 PLPXTSP 747
P P T P
Sbjct: 102 PKPPTKP 108
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -3
Query: 794 GWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAG 636
G G G R G G G G RRE GG SG G GGS G
Sbjct: 98 GGGGGYRSGGGGGYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGG 150
>At1g74240.1 68414.m08598 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 364
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Frame = -1
Query: 565 LVQGGGXLWKKRQQRGLFTGSW-------PFAGLLL 479
+ Q G +WK++ +GL+ G W PFAGL++
Sbjct: 191 MFQAGCSIWKEQGPKGLYAGYWSTLARDVPFAGLMV 226
>At3g55480.2 68416.m06162 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203; contains
Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 501 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 403
GL L F S +LS IPL++ ITV +E++ L
Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956
>At3g55480.1 68416.m06161 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203; contains
Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 501 GLLLAFCSHVLSCVIPLILWITVLPPLSELIPL 403
GL L F S +LS IPL++ ITV +E++ L
Sbjct: 924 GLRLRFSSKILSSEIPLLITITVEGKCTEVLNL 956
>At5g61660.1 68418.m07736 glycine-rich protein
Length = 134
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = -3
Query: 794 GWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
GWG G+ G G G G G +GG G GS G GG G G
Sbjct: 68 GWGRGSGYGYGSGSGSGTGYGYGSGGGGARGG---GYGYGSGNGRSGGGGGGGGFNG 121
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = -3
Query: 794 GWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
G G G G + G++ G G KGG G G++ GG G G
Sbjct: 340 GGGKNGGKGGGGHPLDGKMGGGGGGPNGNKGGGGVQMNGGPNGGKKGGGGGGGGGGG 396
>At4g30450.1 68417.m04324 glycine-rich protein
Length = 107
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPGI 621
G G G G G+G G G G S S + S GGS AG + G
Sbjct: 37 GIGIGLGVGLGIGLGGGSGSGAGAGSGSGSGSRSSSSSSSSSSSSSSGSGGS-AGSSAGS 95
Query: 620 F 618
F
Sbjct: 96 F 96
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPP---CRSPXSDPARLPD-TCPPFSLRE 720
PP+ S + A P + + P P PP +P PA P + PP ++
Sbjct: 72 PPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITP 131
Query: 721 AXPLPXTSPCTXLXPTP 771
PL T P P P
Sbjct: 132 PPPLATTPPALPPKPLP 148
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +1
Query: 604 PXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLP-XTSPCTXLXPTPXLA 780
P T+K P PP +P + P PP + P P +PC PTP
Sbjct: 115 PPPTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPP 174
Query: 781 P 783
P
Sbjct: 175 P 175
>At3g20830.1 68416.m02634 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 408
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 346 PIRKPPLPARWPIH*CRKNLPHL 278
P PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
PPE + P T P P PP SP P LP PP + + P
Sbjct: 63 PPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSP---PPPLPTEAPPPANPVSSPP 119
Query: 733 PXTSPCTXLXPTPXLAP 783
P +SP P P AP
Sbjct: 120 PESSP---PPPPPTEAP 133
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,793,755
Number of Sequences: 28952
Number of extensions: 258857
Number of successful extensions: 873
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2227127592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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