Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A13
(884 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 166 2e-41
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 162 3e-40
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 156 2e-38
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 156 2e-38
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 31 1.0
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 2.3
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 5.4
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 5.4
At4g00640.1 68417.m00088 hypothetical protein 28 9.5
At3g59230.1 68416.m06603 F-box family protein contains F-box dom... 28 9.5
At1g17030.1 68414.m02069 expressed protein 28 9.5
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 166 bits (403), Expect = 2e-41
Identities = 79/155 (50%), Positives = 103/155 (66%)
Frame = +3
Query: 330 RIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVR 509
RIPERVVHA+GA A G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+R
Sbjct: 58 RIPERVVHARGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLR 117
Query: 510 DPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPXTHLKDPDMFWDLLT 689
DPRGFAVKFYT +G +DLVGNN P+FF+RD FP +H K NP +H+++ D +
Sbjct: 118 DPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFS 177
Query: 690 LRPETIHHLLYLFGXRGYS*WLRXMNGYGSHTFXL 794
PE++H +LF G R M G G +T+ L
Sbjct: 178 HHPESLHMFSFLFDDLGIPQDYRHMEGAGVNTYML 212
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 191 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DSP F TT SGAPV + TVG GP LL+D + L+++++FDR
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDR 56
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 162 bits (393), Expect = 3e-40
Identities = 78/155 (50%), Positives = 103/155 (66%)
Frame = +3
Query: 330 RIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVR 509
RIPERVVHA+GA A G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+R
Sbjct: 58 RIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117
Query: 510 DPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPXTHLKDPDMFWDLLT 689
DPRGFAVKFYT +G +DLVGNN P+FFIRD FP +H K NP +H+++ D +
Sbjct: 118 DPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFS 177
Query: 690 LRPETIHHLLYLFGXRGYS*WLRXMNGYGSHTFXL 794
PE+++ +LF G R M+G G +T+ L
Sbjct: 178 HHPESLNMFTFLFDDIGIPQDYRHMDGSGVNTYML 212
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +2
Query: 191 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
+SP F TT SGAPV + TVG GP LL+D + ++++++FDR
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDR 56
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 156 bits (378), Expect = 2e-38
Identities = 77/158 (48%), Positives = 102/158 (64%)
Frame = +3
Query: 321 TGXRIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 500
T RIPERVVHA+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +
Sbjct: 55 TRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPE 114
Query: 501 TVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPXTHLKDPDMFWD 680
T+RD RGFAVKFYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D
Sbjct: 115 TMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILD 174
Query: 681 LLTLRPETIHHLLYLFGXRGYS*WLRXMNGYGSHTFXL 794
++ PE++ ++F G R M G+G HT+ L
Sbjct: 175 YMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTL 212
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 173 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F R
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTR 56
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 156 bits (378), Expect = 2e-38
Identities = 77/158 (48%), Positives = 102/158 (64%)
Frame = +3
Query: 321 TGXRIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSAD 500
T RIPERVVHA+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +
Sbjct: 55 TRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPE 114
Query: 501 TVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPXTHLKDPDMFWD 680
T+RD RGFAVKFYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D
Sbjct: 115 TMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILD 174
Query: 681 LLTLRPETIHHLLYLFGXRGYS*WLRXMNGYGSHTFXL 794
++ PE++ ++F G R M G+G HT+ L
Sbjct: 175 YMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTL 212
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 173 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F R
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTR 56
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 552 LHHQYRTLQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 421
+H R L N+EGH Y+ + ++ L R + +V C+WT L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 182 TLKDSPGFITTKSGAPVGIKTAIQTVG 262
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 182 TLKDSPGFITTKSGAPVGIKTAIQTVG 262
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 220 WSSCWNQNGDTNGGQEWS 273
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
>At4g00640.1 68417.m00088 hypothetical protein
Length = 425
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +3
Query: 333 IPERVVHAK----GAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVG---GESG 491
+P R++ AK G G +++ D SA + ++ R+ + + G G
Sbjct: 24 LPNRMISAKLCPKGLGGTRFWDPMIDSKVRSAIRSKRNVSYRSSLTLNADFNGRFYGHLL 83
Query: 492 SADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFF 590
A P GF + + D V DLVGN+ + F
Sbjct: 84 PAKPQNVPLGFRLLCQSSDSVGDLVGNDRNLEF 116
>At3g59230.1 68416.m06603 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 597 LL*RKWEYYFQLNPTLHHQYRTLQQNLEGHEQYQQIHS 484
LL RKW Y+F P L Q G+++ +IH+
Sbjct: 39 LLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETEIHT 76
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 558 PTLHHQYRTLQQNLEGH 508
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,973,761
Number of Sequences: 28952
Number of extensions: 377951
Number of successful extensions: 921
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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