Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A11
         (1018 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26080.1 68418.m03103 proline-rich family protein contains pr...    31   0.93 
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex...    31   1.2  
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t...    29   4.9  
At5g38560.1 68418.m04662 protein kinase family protein contains ...    28   8.6  
At1g26150.1 68414.m03192 protein kinase family protein similar t...    28   8.6  

>At5g26080.1 68418.m03103 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 141

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/46 (30%), Positives = 16/46 (34%)
 Frame = +3

Query: 672 PXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGP 809
           P    PPPP+    PPP          P     P    PP +P  P
Sbjct: 63  PVAFPPPPPIYSPPPPPIYPPPIYSPPPPPIYPPPIYSPPPTPISP 108


>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 760

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
 Frame = +3

Query: 672 PXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPP-XSPXGPAXGXFXXLLXTXF 848
           P    PPPP+    PPP          P     P    PP  SP  P+       + +  
Sbjct: 439 PPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPP 498

Query: 849 XNPXPXPP 872
             P P PP
Sbjct: 499 PPPPPPPP 506


>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to auxin
           down regulated GB:X69640 GI:296442 from [Glycine max];
           contains Pfam profile PF00234: Protease inhibitor/seed
           storage/LTP family
          Length = 297

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
 Frame = +3

Query: 642 GGGNXXXGXXPXKXXPPPPLIXXXP---PPXXDXXXXXLQPRXXXGPXXXXPPXSP 800
           GGG    G  P    PPP ++   P   PP        ++P     P    PP  P
Sbjct: 79  GGGGGGGGKSPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPITRPPIIIPPIQP 134


>At5g38560.1 68418.m04662 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 681

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 687 PPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGP 809
           PPPP++   PPP          P+    P       SP  P
Sbjct: 88  PPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDASPSPPAP 128


>At1g26150.1 68414.m03192 protein kinase family protein similar to
           Pto kinase interactor 1 GI:3668069 from [Lycopersicon
           esculentum]
          Length = 760

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = +3

Query: 672 PXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSP 800
           P +  PPPPL    PPP         +      P    PP +P
Sbjct: 95  PPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTP 137


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,180,521
Number of Sequences: 28952
Number of extensions: 156638
Number of successful extensions: 1043
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2499440136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)