Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A17
(445 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly... 29 1.4
At5g40200.1 68418.m04878 DegP protease, putative contains simila... 29 1.9
At4g22320.1 68417.m03227 expressed protein 28 3.3
At4g01440.1 68417.m00185 nodulin MtN21 family protein similar to... 28 3.3
At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase fa... 28 3.3
At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative (CH... 27 4.3
At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative (CH... 27 4.3
At5g27230.1 68418.m03248 expressed protein ; expression support... 27 5.7
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 27 7.5
At5g07940.1 68418.m00920 expressed protein 27 7.5
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 27 7.5
At5g24450.1 68418.m02882 transcription factor-related low simila... 26 10.0
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 26 10.0
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 26 10.0
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 26 10.0
At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase fa... 26 10.0
>At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly
identical to GI:9957293; contains Pfam profile: PF01397
terpene synthase family
Length = 591
Score = 29.1 bits (62), Expect = 1.4
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +1
Query: 124 ERQKKVLSLFQD--VDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLKLYRIGYLPK 297
E+ +K+L+ Q +DQ+ D+ K+G Y EA IDN ++ +
Sbjct: 82 EKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRTNIQESDLHAT 141
Query: 298 YYEFSIFYQKLREEAIALFHLFYYAKDFETFYKSAAFARVHLNEGQFL 441
EF +F Q + +F +F ++ F + + + L E +L
Sbjct: 142 ALEFRLFRQHGFNVSEDVFDVF--MENCGKFDRDDIYGLISLYEASYL 187
>At5g40200.1 68418.m04878 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 592
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 172 NVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLKLYRI 282
N +DEY K DYD +D T K+A + L + I
Sbjct: 542 NCEDEYMKFNLDYDQIVVLDTKTAKEATLDILTTHCI 578
>At4g22320.1 68417.m03227 expressed protein
Length = 238
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 100 KDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEE 261
K V +E QKK ++ ++ D++ DD KI +D VE D K VEE
Sbjct: 115 KYVPIAVLEEQKKEITEIEEDDKIEEDD---KIDEDNKVEQE-DKVDEDKTVEE 164
>At4g01440.1 68417.m00185 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 49 ALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIG 201
++V S VV Y F V + E +KK+ F + DQ DDE YK G
Sbjct: 306 SVVGSGVVIFGLYIFLLGKVRLMKEECEKKLPCRFNEDDQEEDDDEQYKKG 356
>At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520]; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1228
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 411 SESGTLVEG-FKVFSIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQFQ 265
S SG ++E +KV +++E K + + E+G++++L K DS+ F+
Sbjct: 595 SGSGQIIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFE 644
>At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 742
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 306 LIVLGKITDSVQFQEFFNSFLIGVVI 229
++V G ITD++ F +F++GV+I
Sbjct: 204 VLVCGFITDAIGIHSMFGAFVVGVLI 229
>At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 810
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 306 LIVLGKITDSVQFQEFFNSFLIGVVI 229
++V G ITD++ F +F++GV+I
Sbjct: 272 VLVCGFITDAIGIHSMFGAFVVGVLI 297
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 106 VDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLK 270
V A+ +E+++K L L + + E+ K KD+D+E + K+ VE+ K
Sbjct: 69 VKALELEKKEKELCLIDESMKAK-QSEFEKKEKDFDLEQKAEVEKRKREVEQLEK 122
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 136 KVLSLFQDVDQVNVDDEYYKIGKDYDVEANI-DNYTNKKAVEEFLKLYRIGYLPKYYEFS 312
K+++L DV ++ V+ IG D ++ + D +TN ++ L+L ++GY K E++
Sbjct: 287 KIVNLVNDVYEIEVNTI---IGNPEDFKSLVPDFHTNDTEFQQVLELVKMGYRLKKTEWN 343
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 81 NVSLQDKRCRRSVCGAPEKGFIPFP 155
N+S QDK C+ G EK F+ P
Sbjct: 393 NISAQDKFCQMEDSGPAEKSFMKVP 417
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 372 SIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQFQEFFNSFLIGVVID 226
+I Q+ S F L E GE+ V GK+ D V SF + V ++
Sbjct: 480 TITVQLSNVESKFASSLSESGEVKVEGKVKDGVPHLTKVGSFEVDVTLE 528
>At5g24450.1 68418.m02882 transcription factor-related low
similarity to transcription factor IIIC63 [Homo sapiens]
GI:5281316
Length = 545
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 73 SPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNY 237
S + + TKD+ ++K + D D ++DDEY + D D+ + Y
Sbjct: 434 SQRNHQETTKDMKKCKNTNKEKDDDVNADEDSEDLDDEYEEAANDDDISISSHGY 488
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 145 SLFQDVDQVNVDDEYYKIGKDYDVEANIDNYT 240
SL + DDE Y D+++EA DNY+
Sbjct: 94 SLLDPESLIYEDDENYSEQYDFEMEAEPDNYS 125
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 34 LAGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEY 189
+AG +A + S+ +P YH K + + E+ + +S F +NVD +
Sbjct: 490 IAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTH 540
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 34 LAGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEY 189
+AG +A + S+ +P YH K + + E+ + +S F +NVD +
Sbjct: 527 IAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTH 577
>At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|O43520], Mus musculus [SP|P70704]; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1218
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -2
Query: 411 SESGTLVEG-FKVFSIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQFQ 265
S SG +E +KV ++++ K + + E+G++++L K DS+ F+
Sbjct: 584 SHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFE 633
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,921,106
Number of Sequences: 28952
Number of extensions: 168681
Number of successful extensions: 462
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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