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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A10
         (390 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase, put...    52   1e-07
At1g56000.1 68414.m06425 amine oxidase-related contains Pfam pro...    31   0.21 
At1g55980.1 68414.m06421 expressed protein                             31   0.21 
At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase NAD-bi...    30   0.48 
At1g50080.1 68414.m05618 hypothetical protein                          28   1.9  
At3g52480.1 68416.m05771 expressed protein                             27   4.5  
At5g17700.1 68418.m02074 MATE efflux family protein similar to r...    27   5.9  
At3g46340.1 68416.m05018 leucine-rich repeat protein kinase, put...    27   5.9  
At2g27280.1 68415.m03278 hypothetical protein                          27   5.9  
At1g52990.1 68414.m05997 thioredoxin family protein similar to S...    27   5.9  
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea...    26   7.8  
At4g23490.1 68417.m03384 fringe-related protein  + weak similari...    26   7.8  
At4g11350.1 68417.m01831 fringe-related protein various hypothet...    26   7.8  
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen...    26   7.8  
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m...    26   7.8  
At1g12550.1 68414.m01455 oxidoreductase family protein similar t...    26   7.8  

>At3g15290.1 68416.m01931 3-hydroxybutyryl-CoA dehydrogenase,
           putative similar to S(+)-beta-hydroxybutyryl CoA
           dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase)
           [Paracoccus denitrificans] GI:12003356; contains Pfam
           profiles PF02737: 3-hydroxyacyl-CoA dehydrogenase NAD
           binding, PF00725: 3-hydroxyacyl-CoA dehydrogenase
           C-terminal
          Length = 294

 Score = 52.4 bits (120), Expect = 1e-07
 Identities = 33/114 (28%), Positives = 59/114 (51%)
 Frame = +2

Query: 47  EKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNL 226
           + VG+VG+G +G   A L A+ G  V L D     ++ A A I   +K     GL+   +
Sbjct: 5   KSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISKEV 64

Query: 227 NADEQFQCVKGTCDLAIAVXDAIFVQECVPENLELKKKVFQNLDNVVDDNTILS 388
             D+    ++ T +L   +  A  + E + E+ ++KKK+F++LD +   + IL+
Sbjct: 65  -GDDAMHRLRLTSNLE-DLCSADIIVEAIVESEDIKKKLFKDLDGIAKSSAILA 116


>At1g56000.1 68414.m06425 amine oxidase-related contains Pfam
           profile PF01593: amine oxidase, flavin-containing
          Length = 384

 Score = 31.5 bits (68), Expect = 0.21
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  LRVVMASKFKSEKVGIVGSGLIGRSWAMLFASVGYQVTLFD 136
           +R  M+S   + KV ++GSG+ G   A   A  G  VT+FD
Sbjct: 10  IRKQMSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 50


>At1g55980.1 68414.m06421 expressed protein
          Length = 464

 Score = 31.5 bits (68), Expect = 0.21
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  LRVVMASKFKSEKVGIVGSGLIGRSWAMLFASVGYQVTLFD 136
           +R  M+S   + KV ++GSG+ G   A   A  G  VT+FD
Sbjct: 148 IRKQMSSVAVAMKVAVIGSGISGAVCASTLARNGVSVTIFD 188


>At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase
           NAD-binding domain-containing protein similar to
           SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
           1.1.1.60) (Tartronate semialdehyde reductase)
           {Escherichia coli}; contains Pfam profile PF03446: NAD
           binding domain of 6-phosphogluconate dehydrogenase
          Length = 334

 Score = 30.3 bits (65), Expect = 0.48
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 50  KVGIVGSGLIGRSWAMLFASVGYQVTLFD 136
           K+G +G+G++GRS        GY VT+F+
Sbjct: 39  KIGWIGTGVMGRSMCGHLIKAGYTVTVFN 67


>At1g50080.1 68414.m05618 hypothetical protein
          Length = 91

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -1

Query: 189 FNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNLEAMTT 19
           FNC L+   AS I      + +     + NN+ H+    P PTI    D  +  + T
Sbjct: 18  FNCVLLCMFASFIRKLAAQSTIYNLWKQRNNVVHNQVSIPAPTIFKLIDREIRNIIT 74


>At3g52480.1 68416.m05771 expressed protein
          Length = 209

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 282 TAIAKSQVPFTHWNCSSAFRFPLRSPSF 199
           T I+  +V F+H+N ++ F  P  SP F
Sbjct: 159 TDISDDEVDFSHYNQTTPFSTPCASPPF 186


>At5g17700.1 68418.m02074 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 497

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 44  SEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQL 187
           S KV +V S +IG   + L  + G Q++      + ++DA+AD+ + L
Sbjct: 336 SIKVVLVVSAVIGVICSALCLAFGGQISYLFSDSQAVSDAVADLSIVL 383


>At3g46340.1 68416.m05018 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 889

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 197 EKDGLLRGNLNADEQFQCVKGTC 265
           EKDGL    L+ DEQ +C  G+C
Sbjct: 485 EKDGL---KLSVDEQIRCFPGSC 504


>At2g27280.1 68415.m03278 hypothetical protein 
          Length = 427

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 134 DVVEKQITDAIADIKVQLKTLEK 202
           D  EK+ITDA+   K +L+  EK
Sbjct: 41  DTAEKEITDAVTTAKERLRETEK 63


>At1g52990.1 68414.m05997 thioredoxin family protein similar to
           SP|P48384 Thioredoxin M-type, chloroplast precursor
           (TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
           Thioredoxin
          Length = 313

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = -1

Query: 354 KFWNTFFLSSKFSGTHSCTKIASXTAIAKSQVPFTHW---NCSSAFRFPL 214
           K W   F S++F  TH      + T + K+    T W   NC   F +P+
Sbjct: 143 KSWIPSFTSTEFIFTHREQNQCADTLVKKAIKSSTQWSLFNCCPHFLYPI 192


>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
           family protein contains similarity to regulatory protein
           Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
           (6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
          Length = 781

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 68  SGLIGRSWAMLFASVGYQVTLFDV 139
           S L+  SW +L AS G  V LFDV
Sbjct: 3   SNLVEPSWRLLAASGGDTVKLFDV 26


>At4g23490.1 68417.m03384 fringe-related protein  + weak similarity
           to Fringe [Schistocerca gregaria](GI:6573138);Fringe
           encodes an extracellular protein that regulates Notch
           signalling.
          Length = 526

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 309 ASRKIWNSKRKYSKIW 356
           AS K+W  +++Y KIW
Sbjct: 120 ASSKLWKQRKEYIKIW 135


>At4g11350.1 68417.m01831 fringe-related protein various
           hypothetical proteins from Arabidopsis thaliana strong
           similarity to unknown protein (pir||T13026) similarity
           to predicted proteins + similar to hypothetical protein
           GB:AAC23643 [Arabidopsis thaliana] + weak similarity to
           Fringe [Schistocerca gregaria](GI:6573138);Fringe
           encodes an extracellular protein that regulates Notch
           signalling.
          Length = 489

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 309 ASRKIWNSKRKYSKIW 356
           AS K+W  +++Y KIW
Sbjct: 98  ASSKLWKQRKEYIKIW 113


>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
           hydroxypyruvate reductase identical to hydroxypyruvate
           reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
           Cell Physiol 1997 Apr;38(4):449-55)
          Length = 386

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 41  KSEKVGIVGSGLIGRSWAMLFASVGYQVTL--FDVVE 145
           K + VG++G+G IG ++A +    G+++ L  FD+ +
Sbjct: 164 KGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYFDLYQ 199


>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
           myosin heavy chain (GI:4249703) [Rana catesbeiana];
           similar to smooth muscle myosin heavy chain SM2
           (GI:2352945) [Homo sapiens]
          Length = 476

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = +2

Query: 122 VTLFDVVEKQITDAIADIKVQLKTLEKD-GLLR-------GNLNAD--EQFQCVKGTCD 268
           V  F   E  +T  I D+K QLK LE++ G LR       GNL     E+ + VKG  D
Sbjct: 38  VNKFGNSELGLTSRIEDLKCQLKNLEQEIGFLRARNAGLAGNLEVTKVEEKERVKGLMD 96


>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
           glyoxylate reductase from Homo sapiens (gi:6002730);
           contains Pfam D-isomer specific 2-hydroxyacid
           dehydrogenase, NAD binding domain PF02826
          Length = 323

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 26  MASKFKSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQ 151
           + SK   ++VGIVG G IG   A    S G  ++     +KQ
Sbjct: 146 LGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVISYNSRSQKQ 187


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,775,692
Number of Sequences: 28952
Number of extensions: 171458
Number of successful extensions: 610
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 557595584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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