Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A06
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64370.1 68418.m08086 beta-ureidopropionase, putative / beta-... 125 3e-29
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 32 0.33
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 32 0.33
At1g77640.1 68414.m09039 AP2 domain-containing transcription fac... 30 1.0
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 29 2.4
At4g35380.1 68417.m05026 guanine nucleotide exchange family prot... 28 4.1
At1g11470.1 68414.m01317 hypothetical protein 28 5.4
At5g09640.1 68418.m01115 sinapoylglucose:choline sinapoyltransfe... 27 7.2
At1g21790.1 68414.m02727 expressed protein 27 7.2
At5g46400.1 68418.m05711 expressed protein 27 9.5
At2g28620.1 68415.m03479 kinesin motor protein-related 27 9.5
At2g20060.1 68415.m02344 ribosomal protein L4 family protein con... 27 9.5
>At5g64370.1 68418.m08086 beta-ureidopropionase, putative /
beta-alanine synthase, putative similar to beta-alanine
synthase [Dictyostelium discoideum] GI:14334061;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 408
Score = 125 bits (301), Expect = 3e-29
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = +1
Query: 64 LKWQRPRGVNRIYYGR---KDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTRPPRIV 234
LK + + VNR+ GR + +I L +++ F A KEQ R PR+V
Sbjct: 31 LKPELYQEVNRLLLGRNCGRSLEQIVLPESAKALSSKHDFDLQAASFSADKEQMRNPRVV 90
Query: 235 KVGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREK 414
+VG+IQ+SIA+PT P ++Q + IFDK+K IID AG GVNI+C QE W MPFAFCTRE+
Sbjct: 91 RVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTMPFAFCTRER 150
Query: 415 QPWCEFAESAE 447
+ WCEFAE +
Sbjct: 151 R-WCEFAEPVD 160
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +2
Query: 443 PRKDPTTRFLRELAVKYAMVIVSSILERDEKHADILWNTTVIISDTG 583
P +T+FL+ELA KY MVIVS ILERD H ++LWNT VII + G
Sbjct: 158 PVDGESTKFLQELAKKYNMVIVSPILERDIDHGEVLWNTAVIIGNNG 204
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 283 INEQKKAIFDKVKKIIDVAGQEGVNIICFQELWNMPFA 396
+ KK KK I+ A +G ++ E+WN P++
Sbjct: 97 VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYS 134
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 283 INEQKKAIFDKVKKIIDVAGQEGVNIICFQELWNMPFA 396
+ KK KK I+ A +G ++ E+WN P++
Sbjct: 97 VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYS 134
>At1g77640.1 68414.m09039 AP2 domain-containing transcription
factor, putative Similar to DREB1A (GP:3660548)
[Arabidopsis thaliana]
Length = 244
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 458 SGPSSADSANSHQGCFSRVQKAKGMFHSSW 369
S SS+ SA HQ C ++++K KG+ SW
Sbjct: 22 SSSSSSTSALRHQSCKNKIKKYKGVRMRSW 51
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 250 QHSIAIPTDRPINEQ--KKAIFDKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPW 423
++ I IP DR I E+ KKA+ +K++++ + + ++ QEL+N T E
Sbjct: 426 KNGIYIPKDRYIQEEAEKKAMAEKIERLELQSESKDKRVVDLQELYNSQ-QILTAELSEK 484
Query: 424 CEFAESAEEGPDYTL 468
E E E +++L
Sbjct: 485 LEKTEKKLEETEHSL 499
>At4g35380.1 68417.m05026 guanine nucleotide exchange family protein
similar to guanine nucleotide exchange factor [Homo
sapiens] GI:5456754; contains Pfam profile PF01369: Sec7
domain
Length = 1706
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 503 IVSSILERDEKHADILWNTTVIISDTGKRN 592
I+S ++ R +KH D+L ++SD +RN
Sbjct: 1487 IMSYVVSRTKKHIDVLSQIVEVVSDLYRRN 1516
>At1g11470.1 68414.m01317 hypothetical protein
Length = 150
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 458 SGPSSADSANSHQGCFSRVQKAKGMF--HSSWKQIILTPS*PATSIIFFTLSKIAFFCSL 285
S SS D+ N+ G ++ KA M H QI + S F+ S++A F +
Sbjct: 36 SSASSCDAENAKSGGSRQLGKAAYMEGKHVDALQIFMWMHRKEMS---FSTSEVALFVDI 92
Query: 284 IGRSVGIA 261
IG ++GIA
Sbjct: 93 IGNTIGIA 100
>At5g09640.1 68418.m01115 sinapoylglucose:choline
sinapoyltransferase (SNG2) GC donor splice site at exon
11 and 13; TA donor splice site at exon 10; similar to
serine carboxypeptidase I precursor (SP:P37890) [Oryza
sativa]; wound-inducible carboxypeptidase, Lycopersicon
esculentum, EMBL:AF242849; contains Pfam profile
PF00450: Serine carboxypeptidase; identical to cDNA
sinapoylglucose:choline sinapoyltransferase (SNG2)
GI:15418806
Length = 465
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 393 EGHVP*FLETNYINSLLTGDIDYLFYLIEN 304
EG +P LET Y++ +GD++ +Y +++
Sbjct: 34 EGPLPFELETGYVSIGESGDVELFYYFVKS 63
>At1g21790.1 68414.m02727 expressed protein
Length = 288
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 330 DYLFYLIENCFFLLVNWTV-GWY-RDRVLNNTN 238
+ L+ + CFF L+NW V W RD + NT+
Sbjct: 42 ELLWVICGGCFFQLMNWVVRSWISRDPIFVNTS 74
>At5g46400.1 68418.m05711 expressed protein
Length = 1036
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 339 GDIDYLFYLIENCFFLLVNWTVGWYR 262
GD D+ L E C N+T W+R
Sbjct: 312 GDFDWAINLYERCLIPCANYTEFWFR 337
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +1
Query: 250 QHSIAIPTDRPINEQ--KKAIFDKVKKIIDVAGQ-EGVNIICFQELWN 384
++ I IP +R E+ KKA+ DK+++ ++V G+ + II QEL+N
Sbjct: 428 KNGIYIPKERYTQEEAEKKAMADKIEQ-MEVEGEAKDKQIIDLQELYN 474
>At2g20060.1 68415.m02344 ribosomal protein L4 family protein
contains Pfam profile PF00573: ribosomal protein L4/L1
family
Length = 300
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 351 SLLTGDIDYLFYLIENCFFLLVNWTVGWYRDRVLNNTNFNDPRRAGLLL 205
S+LT D + L+ L + T+G Y+D V+ TNF + + ++L
Sbjct: 58 SILTPDDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,791,677
Number of Sequences: 28952
Number of extensions: 289064
Number of successful extensions: 793
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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