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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B06
         (574 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17890.1 68417.m02666 human Rev interacting-like family prote...    70   1e-12
At5g46750.1 68418.m05759 human Rev interacting-like family prote...    61   6e-10
At2g35210.1 68415.m04319 human Rev interacting-like family prote...    56   2e-08
At2g35210.2 68415.m04318 human Rev interacting-like family prote...    36   0.015
At4g07493.1 68417.m01156 hypothetical protein                          30   1.3  
At3g28790.1 68416.m03593 expressed protein                             29   1.7  
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta...    29   2.2  
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc...    29   2.9  
At1g63590.1 68414.m07188 receptor-like protein kinase-related co...    29   2.9  
At4g08013.1 68417.m01283 hypothetical protein low similarity to ...    28   3.8  
At2g44700.1 68415.m05563 kelch repeat-containing F-box family pr...    28   3.8  
At5g22090.1 68418.m02572 expressed protein                             28   5.1  
At1g70130.1 68414.m08070 lectin protein kinase, putative similar...    28   5.1  
At1g63530.1 68414.m07182 hypothetical protein                          28   5.1  
At3g44200.1 68416.m04739 protein kinase family protein contains ...    27   6.7  
At3g14980.1 68416.m01894 PHD finger transcription factor, putati...    27   6.7  
At2g31370.3 68415.m03832 bZIP transcription factor (POSF21) iden...    27   8.9  
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden...    27   8.9  
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden...    27   8.9  
At2g16770.1 68415.m01923 expressed protein                             27   8.9  
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    27   8.9  
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    27   8.9  

>At4g17890.1 68417.m02666 human Rev interacting-like family protein
           / hRIP family protein contains InterPro accession
           IPR001164: Human Rev interacting-like protein (hRIP)
          Length = 413

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
 Frame = +3

Query: 21  SYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSA 200
           S   +  + ++ P  S +  + F  +   P   + ++ K     ++  + D A KKF +A
Sbjct: 262 SVGGTQVLNHVAPPKSSSFFSDFGMDSSFPKKSSSNSSK-----SQVEESDEARKKFTNA 316

Query: 201 KAISSAQFFGEQDSRWEKES--NLSRFQGSTSISSADYFGSDGQRPAQRNSAFNVSAPDL 374
           K+ISSAQ+FG+Q+   + ES   L +F GS SISSAD++G D     Q +S  +++A DL
Sbjct: 317 KSISSAQYFGDQNKNADLESKATLQKFAGSASISSADFYGHD-----QDDSNIDITASDL 371

Query: 375 DEVRESVRA-----GVTRVAG----RLSSLANGVVSSIQER 470
              R S +A      +  +AG    +L +LA+G+ S IQ+R
Sbjct: 372 IN-RLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQDR 411


>At5g46750.1 68418.m05759 human Rev interacting-like family protein
           / hRIP family protein contains Pfam profile PF01412:
           Putative GTP-ase activating protein for Arf
          Length = 402

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
 Frame = +3

Query: 27  SASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKA 206
           S +  + ++ P  S      F  +   P   + S+ K +   T     D A KKF +AK+
Sbjct: 253 SGTRVLSHVAPPKSSNFFNEFGMDSAFPKKSSSSSSKAQVEET-----DEARKKFSNAKS 307

Query: 207 ISSAQFFGEQ--DSRWEKESNLSRFQGSTSISSADYFG---SDGQRPAQRNSAFNVSAPD 371
           ISSAQFFG Q  D+  + ++ L +F GS +ISS+D FG    D       +   N  +  
Sbjct: 308 ISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLFGHGPDDSNIDITASDLINRISFQ 367

Query: 372 LDEVRESVRAGVTRVAGRLSSLANGVVSSIQER 470
             +   S+         +L + A+ + S +Q+R
Sbjct: 368 AQQDMSSIANLAEETKNKLGTFASSIFSDLQDR 400


>At2g35210.1 68415.m04319 human Rev interacting-like family protein
           / hRIP family protein similar to ARFGAP1 protein
           GI:7211442 from [Homo sapiens]; contains InterPro
           accession IPR001164: Human Rev interacting-like protein
           (hRIP)
          Length = 395

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
 Frame = +3

Query: 24  YSASDTVQNIEPEVSRAVHTMFTP-------EERAPAAPAQSAGKP--RGRRTEPVDDDS 176
           +  +D VQN E  +S  V +   P       EE       +   KP     + +  + D 
Sbjct: 238 FDYADNVQNREDYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDE 297

Query: 177 AVKKFGSAKAISSAQFFGEQDSR--WEKESNLSRFQGSTSISSADYFG-SDGQRP 332
           A KKF +AK+ISSAQ+FG  ++    E +S+L +F GS++ISSAD FG  DG  P
Sbjct: 298 ARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFP 352


>At2g35210.2 68415.m04318 human Rev interacting-like family protein
           / hRIP family protein similar to ARFGAP1 protein
           GI:7211442 from [Homo sapiens]; contains InterPro
           accession IPR001164: Human Rev interacting-like protein
           (hRIP)
          Length = 371

 Score = 36.3 bits (80), Expect = 0.015
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
 Frame = +3

Query: 24  YSASDTVQNIEPEVSRAVHTMFTP-------EERAPAAPAQSAGKP--RGRRTEPVDDDS 176
           +  +D VQN E  +S  V +   P       EE       +   KP     + +  + D 
Sbjct: 238 FDYADNVQNREDYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDE 297

Query: 177 AVKKFGSAKAISSAQFFGEQDSR--WEKESNLSRFQGS 284
           A KKF +AK+ISSAQ+FG  ++    E +S+L +F  S
Sbjct: 298 ARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSQS 335


>At4g07493.1 68417.m01156 hypothetical protein
          Length = 158

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 135 KPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFG 314
           KP GRR E VD+DS  ++  S K     +  G+ D   E E + +R +    +   D+ G
Sbjct: 100 KPVGRRLELVDEDSK-EEMASPKEADQTERGGDDD--LESEKSATRNESYKLLKHNDFLG 156

Query: 315 S 317
           +
Sbjct: 157 T 157


>At3g28790.1 68416.m03593 expressed protein 
          Length = 608

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
 Frame = +3

Query: 90  TPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWE--KESN 263
           TP   AP+ PA       G+ +E   + +++KK  ++K+ S +   G      E  K S+
Sbjct: 307 TPSTPAPSTPA------AGKTSEKGSESASMKKESNSKSESESAASGSVSKTKETNKGSS 360

Query: 264 LSRFQGSTSISSADYFGSDGQRPAQRNSAFNVSAPDLDEVRESVRAGVTRVAGRLSSLAN 443
              ++ +T  SS    GS    P    S  +  A        S  A  +  AG  +S   
Sbjct: 361 GDTYKDTTGTSSGSPSGSPSGSPTPSTST-DGKASSKGSASASAGASASASAGASASAEE 419

Query: 444 GVVSSIQE 467
              S  +E
Sbjct: 420 SAASQKKE 427


>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
           domain-containing protein / cell division
           protein-related similar to GlsA [Volvox carteri f.
           nagariensis] GI:4633129; contains Pfam profiles PF00226
           DnaJ domain, PF00249 Myb-like DNA-binding domain
          Length = 663

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
 Frame = +3

Query: 102 RAPAAPA--QSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSR- 272
           R PA  A   +A K  G   EP DD+   KK G  K       F    ++ +K+S   + 
Sbjct: 64  REPAGHAFHSAALKLHGCAEEPTDDEGGDKKVGDDKEKEYVPSFNSYANKGKKKSGTQQQ 123

Query: 273 -FQGSTSISSADYFGSDGQ-RPAQRNSAFNVSAPDLDEVRES 392
                  +S+  Y  ++ Q R + R +A       L + +E+
Sbjct: 124 DHYALLGLSNLRYLATEDQIRKSYREAALKHHPDKLAKAKEA 165


>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein weak similarity to
           CARS-Cyp [Homo sapiens]  GI:1117968; contains Pfam
           profile PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 837

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 PLKRSARRSSSVNRIRDGRRNRIYLDSKAARASRQRTTSGPT 321
           PL+RS+RRS S + +R  RR+   L     + SR+  +  PT
Sbjct: 514 PLRRSSRRSPSRSPVRSSRRS---LSRSPIQLSRRSLSRSPT 552


>At1g63590.1 68414.m07188 receptor-like protein kinase-related
           contains Pfam PF01657: Domain of unknown function;
           similar to receptor-like protein kinase 4 (GI:13506745)
           {Arabidopsis thaliana}
          Length = 268

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
 Frame = +3

Query: 162 VDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQR 341
           V+D  +  +F +  ++ S QFF +  +  EK   L      +S     YF  D Q   Q 
Sbjct: 133 VEDVPSTARFSTGNSLDSPQFFSQ--TLLEKLDALILRASLSSSLPVPYFVDDQQHVTQL 190

Query: 342 NSAFNVSA-----PDLDEVRESV--RAGVTRVAG 422
             ++++ A     PDLD    +V  R  V R++G
Sbjct: 191 EGSYDLHAMVQCSPDLDPRNCTVCLRLAVQRLSG 224


>At4g08013.1 68417.m01283 hypothetical protein low similarity to
           SCARECROW [Zea mays] GI:10178637
          Length = 113

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 15  PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQS 128
           PA+   S T Q ++P   R+    F P   AP    QS
Sbjct: 42  PAAAPQSSTTQRVDPPPPRSEEAQFNPPPEAPLNQEQS 79


>At2g44700.1 68415.m05563 kelch repeat-containing F-box family
           protein contains Pfam PF00646: F-box domain; contains
           Pfam PF01344 : Kelch motif;
          Length = 368

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 119 WCRRCSFLRCEHGVHGA 69
           WCR    LR E G+HGA
Sbjct: 328 WCRMIGLLRSEVGIHGA 344


>At5g22090.1 68418.m02572 expressed protein
          Length = 463

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 282 STSISSADYFGSDGQRPAQRNSAFNVSAPDLDEVRESVRAGV 407
           S  +SS  +   +G  P +R S+     PD +E  E  R+GV
Sbjct: 44  SADLSSKTWVSQNGFSPMKRISSSEKLRPDEEEAEEESRSGV 85


>At1g70130.1 68414.m08070 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733
          Length = 656

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 346 EFLCAGRCPSDPK*SADEMLVLPWNLDRFDSFSHLESCSPK 224
           E  C GR P  P+ S  EM++  W LD +DS   L+    K
Sbjct: 527 EITC-GRRPIGPRGSPSEMVLTDWVLDCWDSGDILQVVDEK 566


>At1g63530.1 68414.m07182 hypothetical protein
          Length = 499

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
 Frame = +3

Query: 15  PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAP-AQSAGKPRGRRTEPVDDDSAVKKF 191
           PAS S+S T   +      +V ++F P +  P    A  +  P   R E      A   F
Sbjct: 146 PASSSSSSTSTVVFGTTPVSVSSLFGPSQDFPKTTFACCSSTPAPTRCEC---SFAKPFF 202

Query: 192 GSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRNS 347
           GS+ A SS+  FG   S     +  S F G+++ S +  FG   Q P   +S
Sbjct: 203 GSSPASSSSNLFGPNPS----TTTASVF-GTSATSGSSLFG-PAQHPLSYDS 248


>At3g44200.1 68416.m04739 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains
           serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 941

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 54  EPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQ 221
           E EV +      +P  R+  +   S  +PR +  +P+ + S  K F S    S A+
Sbjct: 787 EMEVRKGATPSESPTTRSIISEPDSRTEPRPKEPDPITNYSETKSFNSCSDSSPAE 842


>At3g14980.1 68416.m01894 PHD finger transcription factor, putative
           contains Pfam profile: PF00628 PHD-finger
          Length = 1189

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 22/91 (24%), Positives = 34/91 (37%)
 Frame = -1

Query: 475 PYRSCIEDTTPLAREDNRPATRVTPARTDSRTSSRSGAETLKAEFLCAGRCPSDPK*SAD 296
           P+ SC  +      +  R   R+  A  D       G      E +C   CPS    +  
Sbjct: 694 PFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACL 753

Query: 295 EMLVLPWNLDRFDSFSHLESCSPKNCAELIA 203
            M VLP      +   +  SC+   C+EL++
Sbjct: 754 SMQVLP------EGSWYCSSCTCWICSELVS 778


>At2g31370.3 68415.m03832 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 279

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
           KF S+ A SSAQ      + W+ E+ +    GSTS +  +   S G+RP  R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157


>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 398

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
           KF S+ A SSAQ      + W+ E+ +    GSTS +  +   S G+RP  R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157


>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 398

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
           KF S+ A SSAQ      + W+ E+ +    GSTS +  +   S G+RP  R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157


>At2g16770.1 68415.m01923 expressed protein
          Length = 249

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +3

Query: 45  QNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQF 224
           +N        VHT   P++ +    ++S+GK R     P+ +  AV+K+   K   +A  
Sbjct: 48  ENTHTHTCLHVHTKILPDKVSTDDTSESSGKKR-----PLGNREAVRKYREKKKAKAAS- 101

Query: 225 FGEQDSRWEKESN--LSRFQGSTSISS 299
             ++  R +  +N  L R QG  ++ +
Sbjct: 102 LEDEVMRLKAVNNQLLKRLQGQAALEA 128


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 458 RGHDSIGQGGQPTSYPGDPSPDRLP 384
           +G    G+ G+ +SY   PSP R+P
Sbjct: 346 KGRGPAGRRGRSSSYSSSPSPRRIP 370


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 458 RGHDSIGQGGQPTSYPGDPSPDRLP 384
           +G    G+ G+ +SY   PSP R+P
Sbjct: 353 KGRGPAGRRGRSSSYSSSPSPRRIP 377


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,384,303
Number of Sequences: 28952
Number of extensions: 165402
Number of successful extensions: 687
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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