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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A07
         (561 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera...    29   1.6  
At5g66120.2 68418.m08330 3-dehydroquinate synthase, putative sim...    29   2.8  
At3g61030.1 68416.m06828 C2 domain-containing protein similar to...    29   2.8  
At3g60950.1 68416.m06819 C2 domain-containing protein similar to...    29   2.8  
At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low sim...    28   3.7  
At3g09000.1 68416.m01053 proline-rich family protein                   28   4.9  
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen...    27   8.6  
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen...    27   8.6  
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1...    27   8.6  

>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 480

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 267 LPASNARCFARLAGPVEVVGQRRLNPGDDQRQIPFLPVGFA*REKTCG 410
           L  S  R    +  P E+V     NP  +     FLP+GF  R K  G
Sbjct: 293 LAESGKRFIWVIRSPSEIVSSSYFNPHSETDPFSFLPIGFLDRTKEKG 340


>At5g66120.2 68418.m08330 3-dehydroquinate synthase, putative
           similar to aroB [Neisseria gonorrhoeae][GI:2661441];
           contains 3-dehydroquinate synthase domain PF01761
          Length = 442

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = +1

Query: 130 VVVVVEGDASSEIPVRAGLLISRAQLVLFADVAYFTLSLNKNYAPVYLRPTLDAL 294
           VV V  GD S  I + AGLL     L          +  N   AP+YL  T+DAL
Sbjct: 80  VVEVDLGDRSYPIYIGAGLLDHSELLQRHVHGKRVLVVTNDRVAPLYLDKTIDAL 134


>At3g61030.1 68416.m06828 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 23  KRPSTASGMKVLSTSSPSRGPLED-FSEKWLRSMIIVLW*WLRE--TLPLRF 169
           KR S A  MKVL   S SR   E+ F  KWL  ++  +W ++ E  T+ +R+
Sbjct: 14  KRVSKAVDMKVLG--SLSRDDFEENFVVKWLNKLLSKMWPYIAEAATMVVRY 63


>At3g60950.1 68416.m06819 C2 domain-containing protein similar to
           CLB1 [Lycopersicon esculentum] GI:2789434; contains Pfam
           profile PF00168: C2 domain
          Length = 592

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 23  KRPSTASGMKVLSTSSPSRGPLED-FSEKWLRSMIIVLW*WLRE--TLPLRF 169
           KR S A  MKVL   S SR   E+ F  KWL  ++  +W ++ E  T+ +R+
Sbjct: 14  KRVSKAVDMKVLG--SLSRDDFEENFVVKWLNKLLSKMWPYIAEAATMVVRY 63


>At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low
           similarity to breast cancer susceptibility protein
           [Gallus gallus] GI:19568157; contains Pfam profile
           PF00634: BRCA2 repeat
          Length = 1155

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 233 KYATSANNTSCARLISKPARTGIS 162
           K+ T+ + T+CA  ISKPA  G+S
Sbjct: 371 KFDTAVDETNCALNISKPATHGLS 394


>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 23  KRPSTASGMKVLSTSSPSRG 82
           +RPST +G  ++S+ +PSRG
Sbjct: 246 RRPSTPTGPSIVSSKAPSRG 265


>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
           family protein contains PFAM zinc-binding dehydrogenase
           domain PF00107
          Length = 427

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 145 QPLPQHDDHGTKPLFGEIF*RPSTG*ACR*DLHTRRGRRPF--PC 17
           +PL   + H  +P   EI  +      C  DLH  +G  PF  PC
Sbjct: 66  KPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIPFASPC 110


>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
           family protein contains PFAM zinc-binding dehydrogenase
           domain PF00107
          Length = 427

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 145 QPLPQHDDHGTKPLFGEIF*RPSTG*ACR*DLHTRRGRRPF--PC 17
           +PL   + H  +P   EI  +      C  DLH  +G  PF  PC
Sbjct: 66  KPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIPFASPC 110


>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
           (KTN1) [Arabidopsis thaliana] GI:14133602
          Length = 523

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -3

Query: 415 QPP--QVFSLQAKPTGRKGICR*SSPGFKRRWPTTSTGPASR 296
           +PP   V S +    G+ G  +    G   R PTT TGPASR
Sbjct: 125 RPPTRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASR 166


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,436
Number of Sequences: 28952
Number of extensions: 246744
Number of successful extensions: 675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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