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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A24
         (936 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67680.1 68414.m07723 expressed protein                             75   7e-14
At1g67650.1 68414.m07720 expressed protein                             64   1e-10
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi...    39   0.005
At5g03160.1 68418.m00264 DNAJ heat shock N-terminal domain-conta...    35   0.089
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP...    31   0.83 
At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine...    31   1.1  
At1g12270.1 68414.m01419 stress-inducible protein, putative simi...    31   1.5  
At5g41730.1 68418.m05074 protein kinase family protein contains ...    30   1.9  
At3g47660.1 68416.m05188 regulator of chromosome condensation (R...    30   1.9  
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera...    29   5.9  
At2g12940.1 68415.m01419 expressed protein                             29   5.9  
At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi...    28   7.7  
At2g03480.2 68415.m00308 dehydration-responsive protein-related ...    28   7.7  
At2g03480.1 68415.m00307 dehydration-responsive protein-related ...    28   7.7  

>At1g67680.1 68414.m07723 expressed protein
          Length = 664

 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
 Frame = +1

Query: 88  YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEAL---ATLTNA 258
           +  L++  + + YE A+K A ++L I P ++ A  CKVV  ++   F + L     +  A
Sbjct: 24  FTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGA 83

Query: 259 KN-----SALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQ 423
            +       L  DL F KAY  YR+N   EAL  +      T  L  L AQILYRL +  
Sbjct: 84  LSVINSFQKLPIDLGFHKAYCLYRVNKLDEALVCLKGLERDTDTL-VLEAQILYRLGKAD 142

Query: 424 DCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLA 603
            C ++Y+ L K+  +  E                      L     +++ELAYN+  +L 
Sbjct: 143 ACVDVYQKLTKSQIETLEVNLVAGLISAGKASQVQKTLESLKIKPTSSFELAYNTACSLI 202

Query: 604 MRGKYNEALSVL 639
               Y +A  +L
Sbjct: 203 ENNNYADAEQLL 214


>At1g67650.1 68414.m07720 expressed protein
          Length = 651

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
 Frame = +1

Query: 88  YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAK-N 264
           +  L+K  + + YE A+K A ++L I P ++ A  CKVV  ++   F + L  + + K N
Sbjct: 20  FTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYL--IKDVKIN 77

Query: 265 SALAA------DLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQD 426
            AL+       DL F KAY  YR N   EAL  +      +  L  L AQIL  L +   
Sbjct: 78  GALSVINSFPIDLGFHKAYCLYRENKLDEALVCLKGLERESKTLL-LEAQILNCLGKVDA 136

Query: 427 CYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLAM 606
           C ++Y+ L K+     E                       P     TY+LAYN+  +L  
Sbjct: 137 CVDVYQKLNKSGIKLIEVNLVAALIRAGKASQVLESLKIRP---TTTYQLAYNTACSLIE 193

Query: 607 RGKYNEALSVL 639
              Y +A  +L
Sbjct: 194 NSNYVDAEQLL 204


>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515: TPR Domain
          Length = 883

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +1

Query: 55  SANKENNLVQAYLELNKFCQS-SDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 231
           S   ++N ++A+L L +F Q  +D+ +AL+   ++LQ+     KA+H + + F  L   +
Sbjct: 459 SIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHR 518

Query: 232 EALATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 411
           +A+  L+   +     + L+ +    + +   ++A++  D+  ++   L  +   +L  L
Sbjct: 519 KAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDV--ELDAVEKFVLQCL 576

Query: 412 EQYQDCYNLY 441
             YQ    LY
Sbjct: 577 AFYQKELALY 586


>At5g03160.1 68418.m00264 DNAJ heat shock N-terminal
           domain-containing protein similar to P58 protein, Bos
           primigenius taurus, PIR:A56534; similar to p58
           (GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ
           domain; contains Pfam PF00515: TPR Domain
          Length = 482

 Score = 34.7 bits (76), Expect = 0.089
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 286 LFEKAYTQYRLNSPKEALQTVDSAPELTPALKEL---RAQILYRLEQYQDCYNLYRDLLK 456
           LFE+A    ++    +AL  +++A E  PAL E    RA +L    +Y+D  N Y+  L+
Sbjct: 53  LFERASQSIKVKRYSDALDDLNAAIEADPALSEAYFKRASVLRHFCRYEDSENSYQKYLE 112

Query: 457 NTTDEYEDERK 489
             + +   E++
Sbjct: 113 FKSGDSNAEKE 123


>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
           (VPS41) 99.8% identical to Vacuolar assembly protein
           VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
           similar to vacuolar assembly protein vps41 GI:1835787
           from [Lycopersicon esculentum]
          Length = 980

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 334 ALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLK 456
           A++   +   +T ALKE  A++     QYQ  ++LY DLLK
Sbjct: 538 AIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLK 578


>At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine
           aminohydrolase, putative identical to cytidine deaminase
           2 (CDA2) [Arabidopsis thaliana] GI:5080713, cytidine
           deaminase homolog DesE [Arabidopsis thaliana]
           GI:4836447; similar to cytidine deaminase (CDD)
           [Arabidopsis thaliana] GI:3046700; contains Pfam profile
           PF00383: Cytidine and deoxycytidylate deaminase
           zinc-binding
          Length = 337

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 10  LGILDPLLXYWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPN-EQKA 186
           LG +   L  +  +      N +VQA L + K   S   ER  K    +  IAPN + K 
Sbjct: 250 LGPVQAALVDFVARSRGKMFNKIVQAVL-VEKNNASVSQERTAKII--LDTIAPNCDFKV 306

Query: 187 FHCKVVCFLQLHNFKEAL 240
           FHC V C  +L   +E L
Sbjct: 307 FHCSVDCAKRLKYLRETL 324


>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
           to sti (stress inducible protein) [Glycine max]
           GI:872116; contains Pfam profile PF00515 TPR Domain
          Length = 572

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
 Frame = +1

Query: 100 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 279
           N F +   Y  A+K   + ++  PN+ KA+  +   + +L    E L          +  
Sbjct: 391 NDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGL----KDAEKCIEL 446

Query: 280 DLLFEKAYT-----QYRLNSPKEALQTVDSAPELTPALKEL 387
           D  F K Y+     Q+ L     A++T  +  E  P+ +EL
Sbjct: 447 DPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQEL 487


>At5g41730.1 68418.m05074 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 711

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = +1

Query: 37  YWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQK 183
           +W K ++ ++  + V+ ++  N FC  S    A++AAG+I  + P+E +
Sbjct: 92  WWGKVINLHQNKDCVEFHIH-NLFCYFSAVVEAIEAAGEISGLDPSEME 139


>At3g47660.1 68416.m05188 regulator of chromosome condensation
           (RCC1) family protein contains Pfam domain PF00415:
           Regulator of chromosome condensation (RCC1)
          Length = 951

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +1

Query: 106 FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADL 285
           FC S   +++L AA     +AP   + +     C+++L   +E+LAT     NSA  ++ 
Sbjct: 665 FCNSCTSKKSLAAA-----MAPKTNRPYRVCDDCYIKLEGIRESLAT---PANSARFSNA 716

Query: 286 LFEKAYTQYRLN-SPKEALQTVDS 354
               +Y    +  +P+  L  VDS
Sbjct: 717 SLPSSYEMDEIGITPQRQLLRVDS 740


>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
           UDP-glucose:sinapate glucosyltransferase GI:9794913 from
           [Brassica napus]
          Length = 479

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 130 RALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLT 252
           R L+  GKI++  P E+   H  + CFL    +   +  LT
Sbjct: 332 RELEEKGKIVEWCPQERVLAHPAIACFLSHCGWNSTMEALT 372


>At2g12940.1 68415.m01419 expressed protein
          Length = 294

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 23/104 (22%), Positives = 44/104 (42%)
 Frame = +1

Query: 94  ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 273
           ELNK  +S+  +       ++ +I  N + A H K      + N +  +  + N   S  
Sbjct: 132 ELNKIAKSNKLKEVALDPKEVRRILKNRESAAHLKQKKLQYMINLEHRINFVENENASIF 191

Query: 274 AADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILY 405
               L E   T   +N  KE +  ++S  E+   L+++  + L+
Sbjct: 192 EKIKLLENDKTM-MMNEKKEIMIRIESM-EIQAQLRDVLTEHLH 233


>At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 504

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 22  DPLLXYWTKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQI 165
           D ++  W +       +NL    + LN FC+ S    AL   GK++++
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL 145


>At2g03480.2 68415.m00308 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase;
           non-consensus GA donor site at exon 4
          Length = 595

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +1

Query: 238 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 414
           LA LT+    + ++  L    Y+ YR    + A+  +D  +  L  +LKE       R E
Sbjct: 36  LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94

Query: 415 QYQDCYNLYRDLLKNTTDEYEDER 486
            Y  CYN+  +LL    +  E +R
Sbjct: 95  SYVPCYNITGNLLAGLQEGEELDR 118


>At2g03480.1 68415.m00307 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase;
           non-consensus GA donor site at exon 4
          Length = 606

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +1

Query: 238 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 414
           LA LT+    + ++  L    Y+ YR    + A+  +D  +  L  +LKE       R E
Sbjct: 36  LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94

Query: 415 QYQDCYNLYRDLLKNTTDEYEDER 486
            Y  CYN+  +LL    +  E +R
Sbjct: 95  SYVPCYNITGNLLAGLQEGEELDR 118


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,422,914
Number of Sequences: 28952
Number of extensions: 328894
Number of successful extensions: 881
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2236853040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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