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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B01_e2_03.seq
         (1560 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g44635.1 68418.m05469 minichromosome maintenance family prote...    47   4e-05
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ...    35   0.17 
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro...    34   0.29 
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    33   0.39 
At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin; g...    33   0.51 
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro...    32   1.2  
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family...    31   2.1  
At5g18180.1 68418.m02134 Gar1 RNA-binding region family protein ...    31   2.7  
At2g28670.1 68415.m03485 disease resistance-responsive family pr...    31   2.7  
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1...    31   2.7  
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain...    30   3.6  
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t...    30   4.8  
At1g57780.1 68414.m06556 heavy-metal-associated domain-containin...    30   4.8  
At1g51310.1 68414.m05770 tRNA methyl transferase family protein ...    30   4.8  
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro...    29   6.3  
At4g01985.1 68417.m00265 expressed protein                             29   6.3  
At3g24550.1 68416.m03083 protein kinase family protein contains ...    29   6.3  
At2g30560.1 68415.m03722 glycine-rich protein                          29   6.3  
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F...    29   6.3  
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F...    29   6.3  
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa...    29   8.3  
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ...    29   8.3  

>At5g44635.1 68418.m05469 minichromosome maintenance family protein
           / MCM family protein similar to SP|P97311 DNA
           replication licensing factor MCM6 {Mus musculus};
           contains Pfam profile PF00493: MCM2/3/5 family
          Length = 831

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +1

Query: 442 VKDEVGVRCQKLFQDFLEEFKEDN---ELKYEKHAKELLKPELSTLEVSFDDVEKYNQNL 612
           V DE  ++ + +F +FL+ F+ D    EL YE   + +   E + + + F  V  +N  L
Sbjct: 8   VMDEQAIQVENVFLEFLKSFRLDANKPELYYEAEIEAIRGGESTMMYIDFSHVMGFNDAL 67

Query: 613 ATTIIEEYYRIYPFLNQAIXNYVL 684
              I +EY R  P+L  A   +V+
Sbjct: 68  QKAIADEYLRFEPYLRNACKRFVI 91



 Score = 33.1 bits (72), Expect = 0.51
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 722 NKECYISXGDVPTRHKXREXTTAKIGTLIRXXGQMXRT 835
           NK+  +S  ++P   + RE TTA+IG L+   G + RT
Sbjct: 104 NKDINVSFYNLPFTKRLRELTTAEIGKLVSVTGVVTRT 141


>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
            protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
            contains InterPro entry IPR000504: RNA-binding region
            RNP-1 (RNA recognition motif) (RRM)
          Length = 423

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 1205 GXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSG 1101
            G G GG    G G P GP +  G   G R+GG  G
Sbjct: 233  GDGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYGG 267



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSG 1101
            GG G GG  A G G   G   G G   G   GG SG
Sbjct: 381  GGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGGGSG 416


>At1g59910.1 68414.m06749 formin homology 2 domain-containing protein
            / FH2 domain-containing protein contains formin homology
            2 domain, Pfam:PF02128
          Length = 929

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
 Frame = +1

Query: 994  PGQXXLGXFQXTXSRXPXRNXPXGGXPGXXKXXXTEPEXP----PARXPXXXPGPL--XG 1155
            PGQ        + S  P    P    PG      + P  P     A  P   PGP     
Sbjct: 324  PGQYTAVNAPFSTSTQPVSLPPGQYMPGNAALSASTPLTPGQFTTANAPPAPPGPANQTS 383

Query: 1156 PXGGPXPRAXXPPXPXPP 1209
            P   P P A  PP P PP
Sbjct: 384  PPPPPPPSAAAPPPPPPP 401


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
            contains Pfam profile PF00657: GDSL-like
            Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +1

Query: 1057 PXGGXPGXXKXXXTEPEXPPARXPXXXPGPLXGPXGGPXPRAXXPPXPXPP 1209
            P G  P        +P+ PPA  P   P P   P   P P    PP P  P
Sbjct: 25   PPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKP 75



 Score = 30.7 bits (66), Expect = 2.7
 Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1102 PEXPPARXPXXXP--GPLXGPXGGPXPRAXXPPXPXPP 1209
            P  PPA  P   P  GP   P   P P     P P PP
Sbjct: 101  PPKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPP 138



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 1114 PARXPXXXPGPLXGPXGGPXPRAXXPPXPXP 1206
            P+  P   PGP   P   P P+   PP P P
Sbjct: 18   PSSKPVAPPGPSPCPSPPPKPQPKPPPAPSP 48



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +1

Query: 1099 EPEXPPARXPXXXPGPLXGPXGGPXPRAXXPPXPXP 1206
            +P+  PA  P   P P   P   P P    PP P P
Sbjct: 74   KPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTP 109


>At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin;
            glycine-rich protein 16 (GRP16) PMID:11431566
          Length = 244

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSGSVXXN--FXXPGXPPXGXF 1050
            G  G     A G GP      GPG   G   GG SG    +     PG  P G +
Sbjct: 166  GASGGASGGASGGGPGGASGGGPGGASGGGPGGASGGASGDKPEGAPGDKPGGAW 220



 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -2

Query: 1211 PGGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSG 1101
            P G   GG    G  P      GPG   G  +GG SG
Sbjct: 129  PSGDKPGGASGGGDKPGGASGGGPGGASGGASGGASG 165



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -3

Query: 1546 GXAXGGGXAXXXAGGPGXXXGVAXXSRVXVAPVGXXXGA 1430
            G A GGG      GGPG   G A   +   AP     GA
Sbjct: 181  GGASGGGPGGASGGGPGGASGGASGDKPEGAPGDKPGGA 219


>At1g70140.1 68414.m08071 formin homology 2 domain-containing protein
            / FH2 domain-containing protein contains formin homology
            2 domain, Pfam:PF02181
          Length = 760

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +2

Query: 1091 PXPNXRXXXPGTPXPXPGPXXGRXGALXPGQXXPPXXPPRGQXGAK 1228
            P P        +P P P P   + GAL      PP  P RG  G +
Sbjct: 254  PSPPPPIKKGSSPSPPPPPPVKKVGALSSSASKPPPAPVRGASGGE 299


>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
            protein Common family members: At4g18570, At4g04980,
            At5g61090 [Arabidopsis thaliana];  identical to cDNA
            CHUP1 for actin binding protein GI:28071264
          Length = 1004

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 19/57 (33%), Positives = 21/57 (36%)
 Frame = +2

Query: 1085 SXPXPNXRXXXPGTPXPXPGPXXGRXGALXPGQXXPPXXPPRGQXGAKXKPGXQTXR 1255
            S   P+ R   PG   P P P  G      PG   PP  PP G  G     G +  R
Sbjct: 664  STNLPSARPPLPGGGPPPPPPPPGGGPPPPPGGGPPPPPPPPGALGRGAGGGNKVHR 720



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1036 RXPXRNXPXGGXPGXXKXXXTEPEXPPARXPXXXPGPLXGPXGG--PXPRAXXPPXPXPP 1209
            R P    P     G  K        PP   P   P P   P GG  P P    PP P PP
Sbjct: 647  RPPRVPRPPPRSAGGGKSTNLPSARPPL--PGGGPPPPPPPPGGGPPPPPGGGPPPPPPP 704

Query: 1210 GXXGGXG 1230
                G G
Sbjct: 705  PGALGRG 711


>At5g18180.1 68418.m02134 Gar1 RNA-binding region family protein
            contains Pfam profile PF04410: Gar1 protein RNA binding
            region
          Length = 189

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = -2

Query: 1229 PXPPXXPGGXGXGGXXARGXGPP--XGPXRGPGXXXGXRAG 1113
            P P    GG G G    RG GPP   G  RG G   G   G
Sbjct: 132  PQPKGQSGGRGEGRVPPRGRGPPRGRGNFRGRGAPRGASRG 172


>At2g28670.1 68415.m03485 disease resistance-responsive family protein
            / fibroin-related contains similarity to silk fibroin
            heavy chain [Bombyx mori] gi|765323|gb|AAB31861; contains
            disease resistance response protien domain Pfam:FP03018
          Length = 447

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 1205 GXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSGS 1098
            G G G   A G GP  G   G G   G   GG +G+
Sbjct: 124  GAGAGTGSALGGGPGAGSALGGGAGAGPALGGGAGA 159


>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
            non-consensus splice site at the intron:exon boundary
            (AT:exon)
          Length = 247

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +1

Query: 1102 PEXPPARXPXXXPGPLX---GPXGGPXPRAXXPPXPXPP 1209
            P+ PPA  P   P P+     P   P   A  PP P  P
Sbjct: 101  PQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASP 139


>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
            protein / MATH domain-containing protein weak similarity
            to  NtN2 [Medicago truncatula] GI:3776084; contains Pfam
            profile PF00917: MATH domain
          Length = 420

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 28/77 (36%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGP---PXGPXRGPGXXXGXRAGGXSGSVXXNFXXPGXPPXGXFRXGX 1038
            GG G GG   RG GP   P GP  GPG       G   G     F   G  P G    G 
Sbjct: 13   GGRGFGG---RGGGPGFGPGGPGFGPGGPGFGPGGPGFGPGGPGFG--GRGPRGP-GFGP 66

Query: 1037 RDXVXWKXPNXXCPGRG 987
            R    W  P    PG G
Sbjct: 67   RGPGPWSGPRGPRPGGG 83



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 18/44 (40%), Positives = 18/44 (40%)
 Frame = -2

Query: 1229 PXPPXXPGGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSGS 1098
            P P   P G   GG    G GP  GP RGP    G   G   GS
Sbjct: 69   PGPWSGPRGPRPGGGGGPGPGPWSGP-RGPRPGGGGGPGSGCGS 111


>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
            RNA-binding protein from [Solanum tuberosum] GI:15822705,
            [Nicotiana tabacum] GI:15822703, [Nicotiana sylvestris]
            GI:624925; contains InterPro entry IPR000504: RNA-binding
            region RNP-1 (RNA recognition motif) (RRM)
          Length = 309

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 17/56 (30%), Positives = 19/56 (33%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSGSVXXNFXXPGXPPXGXFRXG 1041
            GG G  G  A G G   G   G G   G   GG  G+    +   G    G    G
Sbjct: 138  GGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAGGYGGSGAGGYGGDATG 193


>At1g57780.1 68414.m06556 heavy-metal-associated domain-containing
           protein low similarity to myosin-like antigen GI:159877
           Onchocerca volvulus; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 264

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 421 TFATKSQVKDEVGVRCQKLFQDFLEEFKEDNELKYEKHAKELLKPELSTLEVSFDD---V 591
           T   K+  K E+  + +K  +D +++  ++ + K E   +   KPE S +EV FD     
Sbjct: 85  TLKKKTGKKIEIVTKNEKSSEDKVDDTVQNEDSKDEIVPQNADKPETSIMEVEFDIPFLC 144

Query: 592 EKYNQNLATTI 624
           EKY ++    I
Sbjct: 145 EKYEKDFGKVI 155


>At1g51310.1 68414.m05770 tRNA methyl transferase family protein
           contains Pfam PF03054: tRNA methyl transferase profile;
           similar to tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61). (Swiss-Prot:Q8ZPZ4) [Salmonella
           typhimurium]
          Length = 421

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = +1

Query: 469 QKLFQDFLEEFKEDNELKYEKHAKELLKPELSTLEVSFDDVEKYNQNLATTIIEEY 636
           Q+ F++F  +   +++LKY KH  E +   L  + ++    ++Y + + + IIEEY
Sbjct: 42  QEGFENFWNQCPWEDDLKYAKHVCEQVDVPLEVVHLT----DEYWERVVSYIIEEY 93


>At4g27520.1 68417.m03952 plastocyanin-like domain-containing protein
            similar to PIR|JC7196 phytocyanin-related protein Pn14
            {Ipomoea nil}; contains Pfam profile PF02298:
            Plastocyanin-like domain
          Length = 349

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 29/136 (21%), Positives = 42/136 (30%), Gaps = 5/136 (3%)
 Frame = +1

Query: 1105 EXPPARXP-XXXPGPLXGPXGGPXPRAXXP--PXPXPPGXXGGXGXAXXXNXKTLXXXXP 1275
            + P A  P    PG +  P G   P++  P  P   PPG     G A   + K+     P
Sbjct: 138  QSPHAAAPGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGA--HSPKSSSAVSP 195

Query: 1276 XXXRTXXXXXRXGNXPXRXG*XRXPXXPXAPSGRTAXPXGG--AXGEPXAXAAXPXXXXX 1449
                      + G+          P    +P   ++ P     A   P + +  P     
Sbjct: 196  ATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAP 255

Query: 1450 QXXPXRGSEXPPRXPP 1497
               P  GS  P    P
Sbjct: 256  MTSP-PGSMAPKSSSP 270


>At4g01985.1 68417.m00265 expressed protein
          Length = 579

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSGSVXXNFXXPG 1071
            GG   G     G G   G  RG G   G  +GG SG    +    G
Sbjct: 295  GGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGAGGSVGAGG 340



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRG--PGXXXGXRAGGXSGSV 1095
            GG G  G   RG G   G   G   G   G  +GG SG V
Sbjct: 373  GGGGSVGGGGRGSGGASGGASGGASGGASGGASGGASGGV 412



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSG 1101
            GG   G     G G   G  RG G   G  +GG SG
Sbjct: 363  GGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASG 398


>At3g24550.1 68416.m03083 protein kinase family protein contains Pfam
            domain PF00069: Protein kinase domain
          Length = 652

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
 Frame = +1

Query: 1033 SRXPXRNXPXGGXPGXXKXXXTEPEX---PPARXPXXXPGPLXGPXGGPXPRAXXPPXPX 1203
            S  P    P    P       + P     PP+  P   PG L  P   P P A   P P 
Sbjct: 32   SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPP 91

Query: 1204 PP 1209
             P
Sbjct: 92   SP 93


>At2g30560.1 68415.m03722 glycine-rich protein 
          Length = 171

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXSG 1101
            GG G GG    G G   G  RG G   G + G   G
Sbjct: 5    GGSGSGGGGKGGGGGGSGGGRGGGGGGGAKGGCGGG 40


>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
            (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
            protein-like f-AtMBP [Arabidopsis thaliana]; similar to
            myrosinase binding protein GI:1711295 from [Brassica
            napus]; contains Pfam PF01419: Jacalin-like lectin
            domain; identical to cDNA myrosinase-binding protein-like
            protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 1102 PEXPPARXPXXXPGPLXGPXGGPXPRAXXPPXPXP 1206
            P   PA  P   P P   P   P P     P P P
Sbjct: 297  PAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331


>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
            (F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
            protein-like f-AtMBP [Arabidopsis thaliana]; similar to
            myrosinase binding protein GI:1711295 from [Brassica
            napus]; contains Pfam PF01419: Jacalin-like lectin
            domain; identical to cDNA myrosinase-binding protein-like
            protein (MBP1.2)  GI:6760446
          Length = 642

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 1102 PEXPPARXPXXXPGPLXGPXGGPXPRAXXPPXPXP 1206
            P   PA  P   P P   P   P P     P P P
Sbjct: 297  PAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAP 331


>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
            protein B, putative / snRNP-B, putative / Sm protein B,
            putative similar to SP|P27048 Small nuclear
            ribonucleoprotein associated protein B (snRNP-B) (Sm
            protein B) (Sm-B) (SmB) {Mus musculus}
          Length = 254

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +1

Query: 1063 GGXPGXXKXXXTEPEX---PPARXPXXXPGPLXGPXGGPXPRAXXPPXPXPP 1209
            G  PG  +   + P     PP + P   P    G  G P P    PP P PP
Sbjct: 138  GPAPGMMQPQISRPPQIIRPPGQMPPQPP--FAGQGGPPPPYGMRPPYPGPP 187


>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
            PF00069: Protein kinase domain
          Length = 710

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = +1

Query: 1099 EPEXPPARXP-XXXPGPLXGPXGGP-XPRAXXP-PXPXPP 1209
            E E PPA  P    P P   P GGP  P+   P P   PP
Sbjct: 133  EDESPPAPPPPEQLPPPASSPQGGPKKPKKHHPGPATSPP 172


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,601,083
Number of Sequences: 28952
Number of extensions: 448045
Number of successful extensions: 1892
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4192787520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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