Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40994
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as...    31   4.8  
AK022797-1|BAB14248.1|  801|Homo sapiens protein ( Homo sapiens ...    31   4.8  
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei...    31   4.8  

>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
           associated gene 1 protein.
          Length = 1844

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -1

Query: 240 NNTINKVGS--NDEFENIQTAILKKDVIVLQSHSETESH--TEKTPKKDRKIGRLQRKKA 73
           N+ + KV S  N+   + +T+I  KD+ + QS +E+E+      TPK  R+ GR+     
Sbjct: 546 NDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASLLNVSTPKSTRRSGRISSTPT 605

Query: 72  LANVFGFSSGTV 37
              + G  S  V
Sbjct: 606 TETIRGIDSDDV 617


>AK022797-1|BAB14248.1|  801|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
           ACTIVATOR 1 140 KD SUBUNIT. ).
          Length = 801

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -1

Query: 240 NNTINKVGS--NDEFENIQTAILKKDVIVLQSHSETESH--TEKTPKKDRKIGRLQRKKA 73
           N+ + KV S  N+   + +T+I  KD+ + QS +E+E+      TPK  R+ GR+     
Sbjct: 143 NDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASLLNVSTPKSTRRSGRISSTPT 202

Query: 72  LANVFGFSSGTV 37
              + G  S  V
Sbjct: 203 TETIRGIDSDDV 214


>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
           protein.
          Length = 1844

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = -1

Query: 240 NNTINKVGS--NDEFENIQTAILKKDVIVLQSHSETESH--TEKTPKKDRKIGRLQRKKA 73
           N+ + KV S  N+   + +T+I  KD+ + QS +E+E+      TPK  R+ GR+     
Sbjct: 546 NDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASLLNVSTPKSTRRSGRISSTPT 605

Query: 72  LANVFGFSSGTV 37
              + G  S  V
Sbjct: 606 TETIRGIDSDDV 617


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,090,704
Number of Sequences: 237096
Number of extensions: 1328309
Number of successful extensions: 3603
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3603
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)