Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40705
(753 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 29 0.047
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 29 0.047
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.3
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 5.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 7.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 9.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 29.1 bits (62), Expect = 0.047
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 394 HGGINGFNKANWNSTVDGTKVIFSYLSKDGEEG 492
HG I GFN ++ FS +S DGEEG
Sbjct: 1036 HGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEG 1068
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 29.1 bits (62), Expect = 0.047
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 394 HGGINGFNKANWNSTVDGTKVIFSYLSKDGEEG 492
HG I GFN ++ FS +S DGEEG
Sbjct: 1032 HGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEG 1064
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 222 ESPVTLFWALTTRRVREQKHTVLRDHGRSLC 314
E PV TT + K T++R+H S C
Sbjct: 319 EKPVLSSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 308 RPTVVPKYGVFLFTYPSSRQSPEQRHW 228
RPT+V K + S R S +R+W
Sbjct: 8 RPTIVKKRTKKFIRHQSDRYSKLKRNW 34
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = -1
Query: 753 IVGRSFYAYKTTSRNRSRIRLRDLVSVYNQRYGCRSLGHQFRGQ 622
I+G+ + SRI + + VY Q R G +G+
Sbjct: 478 IIGKDYSLPMVNHSKSSRINIERMKQVYQQLNKYRGNGVSLKGE 521
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 363 TR*QHWERSFTW 398
T+ QHW R TW
Sbjct: 18 TQAQHWSRGNTW 29
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 363 TR*QHWERSFTW 398
T+ QHW R TW
Sbjct: 18 TQAQHWSRGNTW 29
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 54 REYREYRETSRERSRDR 70
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 302 REYREYRETSRERSRDR 318
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 744 RSFYAYKTTSRNRSRIR 694
R + Y+ TSR RSR R
Sbjct: 303 REYREYRETSRERSRDR 319
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,036
Number of Sequences: 438
Number of extensions: 4828
Number of successful extensions: 31
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -