Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40605
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 57 2e-08
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 54 8e-08
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 40 0.002
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 39 0.004
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 37 0.013
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 37 0.017
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 36 0.023
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 36 0.040
02_05_1202 + 34932291-34933027,34933297-34933774 35 0.053
03_01_0249 - 1935355-1935827,1936129-1936330 33 0.22
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 33 0.28
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 32 0.38
11_06_0584 - 25220371-25222917 31 1.1
06_01_0611 + 4420873-4422207 30 2.0
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 2.6
07_01_0785 + 6095041-6095135,6095455-6095760,6098458-6098554,609... 29 3.5
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 4.6
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 29 4.6
04_01_0041 - 464695-464850,467485-469029 29 4.6
01_01_0796 + 6190931-6192745 29 4.6
01_01_0735 + 5730783-5733320 29 4.6
02_04_0470 - 23183925-23184743,23184929-23185153 28 6.1
05_07_0064 + 27440520-27440942,27442387-27442998,27443109-274431... 28 8.1
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 8.1
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 28 8.1
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 56.8 bits (131), Expect = 2e-08
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Frame = +3
Query: 6 VLYTYPENFRAYKALIAAQYSGN*CESSTEFRIWRDQQVRRLLEEVSCRKSACIRK---- 173
VL+T+ N A+KALIAA+YSG E + F++ + L+ K +
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 174 -------CRWKGASN*KQCHRLLRCQ*KSPRRRSAT--QARVWQWASWSDSELLPASCAW 326
R+ +S+ + R + +P S+ A + QW +S +E+ + W
Sbjct: 625 VFESNAIARYVLSSS--HFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 327 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQ 506
+FP LG + + E A + L +L L+ HL + T+LV +TLAD+++ L F
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFA 742
Query: 507 QC*TR 521
+ T+
Sbjct: 743 RIMTK 747
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 70 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANES 237
G V++A NF G +NK+ ++LK P GKVP E+ DG V ESNAIA YV + S
Sbjct: 586 GVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVF--ESNAIARYVLSSS 639
Score = 53.6 bits (123), Expect = 1e-07
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Frame = +3
Query: 6 VLYTYPENFRAYKALIAAQYSGN*CESSTEFRIWRDQQVRRLLEEVSCRKSACIRKCRWK 185
VL+ N A+KALIAA+YSG E F++ + L+ K +
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 186 G-ASN*------KQCH--RLLRCQ*KSPRRRSAT--QARVWQWASWSDSELLPASCAWVF 332
SN CH + R + +P S+ A + QW +S +E+ W++
Sbjct: 64 VFESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLY 123
Query: 333 PYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQQC 512
P LGI + + E A + L +L L+ HL + T+LV +TLAD+++ L F +
Sbjct: 124 PRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARI 183
Query: 513 *TRA 524
T++
Sbjct: 184 MTKS 187
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 70 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 225
G V++ NF G +NK+ +FLK P GK+P E+ DG V ESNAIA YV
Sbjct: 25 GVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESNAIARYV 74
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +2
Query: 404 KSTGRTSSHTHLPCYRENHTCRCHCLQYTAAC---FPAVLDPSVRSSLINVQRWFLTVAH 574
+S G ++H Y H+ + T F ++ S S +V+R+F T+ +
Sbjct: 145 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVN 204
Query: 575 QPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNQKEGKK 691
QP V+G + + P +K Q KE KK
Sbjct: 205 QPNFKKVLGDVKQAESVPPV--QKKAPPPKEQKPKEAKK 241
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +2
Query: 404 KSTGRTSSHTHLPCYRENHTCRCHCLQYTAAC---FPAVLDPSVRSSLINVQRWFLTVAH 574
+S G ++H Y H+ + T F ++ + S +V+R+F T+ +
Sbjct: 706 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVN 765
Query: 575 QPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNQKEGKK 691
QP V+G + + P +K Q KE KK
Sbjct: 766 QPNFKKVMGDVKQADSVP--QVQKKAAAPKEQKPKEAKK 802
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +1
Query: 70 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA----NES 237
G V++ NF G +NK+ +FLK P GK+P E+ +G V ESNAIA YVA N S
Sbjct: 49 GVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESNAIARYVARLKDNSS 106
Query: 238 LRGGDLL 258
L G L+
Sbjct: 107 LCGSSLI 113
Score = 52.0 bits (119), Expect = 4e-07
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Frame = +3
Query: 6 VLYTYPENFRAYKALIAAQYSGN*CESSTEFRIWRDQQVRRLLEEVSCRKSACIRKCRWK 185
VL+ N A+KALIAA+Y+G E + F + + L+ K +
Sbjct: 28 VLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGA 87
Query: 186 GASN*KQCHRLLRCQ*KSPRRRSAT--QARVWQWASWSDSELLPASCAWVFPYLGIMQFN 359
+ + R + S S+ + + QW +S +E+ W++P LG +
Sbjct: 88 VFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYV 147
Query: 360 KQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAF 503
E A + L +L L+ HL + T+LV +TLAD+++ L + F
Sbjct: 148 PVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGF 195
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = +2
Query: 392 TGRLKSTGRTSSHTHLPCYRENHTCRCHCLQYTAAC---FPAVLDPSVRSSLINVQRWFL 562
T +S G ++H Y H+ + T F +L S S +V+R+F
Sbjct: 156 TSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFW 215
Query: 563 TVAHQPQVSAVVGSLTLCAAPPTYDPKKY--QELAGAQNQKEGKK 691
T+ +QP V+G + P K +E + +KE K
Sbjct: 216 TMVNQPNFKKVIGDFKQAESVPPVQKKAAPPKESKAKEAKKEAPK 260
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/47 (51%), Positives = 29/47 (61%)
Frame = +1
Query: 85 VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 225
VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 31 VAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +3
Query: 384 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 491
S+ AA LDG+L +RTFLV+ +++AD++V+S L
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNL 128
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 70 GTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 225
G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA Y+
Sbjct: 26 GADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAKYI 75
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 70 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGG 249
G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y+ + G
Sbjct: 26 GAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKYILRK--HGS 81
Query: 250 DLL 258
DLL
Sbjct: 82 DLL 84
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 384 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTL 491
S+ A +DG+L++RTFLV +T+AD+ V+S L
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVWSNL 126
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 70 GTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 225
G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI Y+
Sbjct: 26 GADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICRYI 75
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 357 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 494
+++ + A +L AAL L+ HL +L + +TLADV +F+TL+
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLFTTLV 297
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 115 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGD 252
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGN 85
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +1
Query: 427 SHAPSLLPRESHLPMSLSSVHCCMLSSSARPERPFVADKRSALVPDRRPPAASVGRRRLA 606
+ AP LP ES LPM+ ++ +LSSS P RP + D + + P+ R LA
Sbjct: 31 TRAPGDLPPES-LPMTAAAYAFSLLSSSTLPGRPALVDAATGIAISY--PSFLAAVRSLA 87
Query: 607 HALCGSSYIRP 639
L S +RP
Sbjct: 88 GGLWCSLGLRP 98
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +3
Query: 372 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV--FSTLLHAFQQ------C*TRAS 527
E AK++LL L+ L+G L R+F + D+++ FS++ H ++Q C R S
Sbjct: 110 EMAKAELLDQLRRLEGVLGDRSFFSGDEFGFLDIVLIPFSSMFHGYKQHMWVKRCKERES 169
Query: 528 VRR 536
VR+
Sbjct: 170 VRQ 172
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 454 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 290
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 529 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 618
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 427 SHAPSLLPRESHLPMSLSSVHCCMLSSSA 513
+H PSL+P ESHL S+SS +L +A
Sbjct: 498 NHQPSLVPNESHLNNSVSSTADGLLMEAA 526
>07_01_0785 +
6095041-6095135,6095455-6095760,6098458-6098554,
6098943-6098999,6099202-6099751,6099922-6100234,
6100245-6100335,6101002-6101469
Length = 658
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 620 PHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGLALLESMQQCTEDND 471
P A A RRR AA + T AE +S++NGR+G E +Q ++D
Sbjct: 541 PSAAAAGRRRKRSAAAA--TATAAEGMSSSNGRNGGEAAEVVQVSIIESD 588
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 130 FLKKFPAGKVPAFESADGK 186
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -2
Query: 490 SVLKTMTSASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEA 311
S + M +A V + +K RVR PSST ++A+RS C + + + A+
Sbjct: 410 SAVDRMVNA-VKVEPKKKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVT 468
Query: 310 GSSSLS 293
SS LS
Sbjct: 469 ESSKLS 474
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/44 (20%), Positives = 22/44 (50%)
Frame = -2
Query: 274 QTRAWVADLLRGDFHWQRSKRWHCFQLEAPFHRHFRMQALFRQE 143
Q R+W ++ + +W + ++AP ++ F Q + +Q+
Sbjct: 232 QVRSWCRFKFSANYFLSKPYQWRKYMVDAPTYQGFHFQGMIKQQ 275
>01_01_0796 + 6190931-6192745
Length = 604
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 421 IFS-HAPSLLPRESHLPMSLSSVHCCMLSSSARPERPFV-ADKRSALVPDRRP 573
+FS HAP+L P S L M ++ H + + + PF+ +D+ L P P
Sbjct: 352 LFSDHAPTLAPLPSPLQMPVAETHLPLQVQAPFMQEPFLFSDQAPVLAPPPTP 404
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 90 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 191
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>02_04_0470 - 23183925-23184743,23184929-23185153
Length = 347
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 442 LLPRESHLPMSLSSVHCCMLSSSARPERPFVADKRSALVPDRRPPAASVGRRR 600
L+P + P+S HCC + + E VPD RPP RR
Sbjct: 220 LVPPPAASPLSNRQRHCCRAAIAGALESATGRPDPGTAVPDPRPPPPPPKARR 272
>05_07_0064 +
27440520-27440942,27442387-27442998,27443109-27443175,
27443271-27443362,27443493-27443708,27443869-27444006,
27444325-27444474
Length = 565
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +3
Query: 252 SATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLT 431
++ + V +W + +LP A L ++ K+ V+R KS L A G+L+
Sbjct: 405 NSNKNNVARWGNLIGYIVLPFRIAMFHDPLEYIRQGKRTVDRKKSSLEAIFTYWSGNLIV 464
Query: 432 RTFLVTERITLADVIVFSTLL 494
+ F + L ++ +T L
Sbjct: 465 KLFGIKTAAALCHGMLANTTL 485
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 376 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 257
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 490 CCMLSSSARPERPFVADKRSALVPDRRPPAASVGRR-RLAHAL 615
CC +SSA P R F A +A R A VGR LAH L
Sbjct: 4 CCCSTSSAVPGRRFAAAGAAAAAVAARWGAVGVGRAVVLAHPL 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,058,255
Number of Sequences: 37544
Number of extensions: 488615
Number of successful extensions: 1602
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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