Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40561
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.2  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           24   5.6  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           24   5.6  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   7.4  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.4  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = +2

Query: 86   SNTYFSIEKQKSPSYVGMYTKDNKEIVMVYEKSKQMLIDETEEKITNKQSENLDLTGHRS 265
            +NT  S E Q +  Y          + + +  SKQ++    EE++    ++   +T H++
Sbjct: 1130 TNTTKSEELQLTVPYYAQSQPQGSPLRLYFFASKQIVTFPDEERLNRASNQIAIVTTHQA 1189

Query: 266  N 268
            N
Sbjct: 1190 N 1190


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -2

Query: 347 DPSSLAHNCGSSDEKVSSSTVCKLKS----SLSGDQLNQDFQIV 228
           DPSSLA   GSS+     + V  L++       G+ ++ DF ++
Sbjct: 97  DPSSLAVRLGSSEHATGGTLVGVLRTVEHPQYDGNTIDFDFSLM 140


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -2

Query: 347 DPSSLAHNCGSSDEKVSSSTVCKLKS----SLSGDQLNQDFQIV 228
           DPSSLA   GSS+     + V  L++       G+ ++ DF ++
Sbjct: 97  DPSSLAVRLGSSEHATGGTLVGVLRTVEHPQYDGNTIDFDFSLM 140


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 149 LSCTFQRNLGFFVF 108
           LS   QRN+G+FVF
Sbjct: 214 LSFKLQRNIGYFVF 227


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 347 DPSSLAHNCGSSDEKVSSST 288
           D SSL  +CG++D + +S T
Sbjct: 308 DRSSLCLHCGAADHRAASCT 327


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 191  SAYFFHTPSLFPYYLSCTFQRNL 123
            S YFF TP L P  L C  + N+
Sbjct: 994  SQYFFVTPKLLP-RLKCNAKMNV 1015


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 406  RLESTEETLPMWILTTPTDQIKALLLYVQPDK 501
            +L+ T++TLP W L     Q+K L L+  P++
Sbjct: 1020 KLQETKDTLPHWQL-----QLKPLKLHEIPEE 1046


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,294
Number of Sequences: 2352
Number of extensions: 13221
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)