Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40534
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   115   1e-27
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   4.8  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   4.8  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   4.8  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  115 bits (277), Expect = 1e-27
 Identities = 52/84 (61%), Positives = 70/84 (83%)
 Frame = +3

Query: 255 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 434
           L+RTKTLVKNAI+V+DA+PFRQWYESHY LPLG+K+  +L   EE +++KKR++   RKY
Sbjct: 19  LIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGEEDVLSKKRTKSNLRKY 76

Query: 435 LARQRLAKVEGALEEQFHTGRLLA 506
           + RQ+ AK++ A+EEQF+ GRLLA
Sbjct: 77  VKRQKNAKIDPAVEEQFNAGRLLA 100



 Score = 65.3 bits (152), Expect = 2e-12
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +2

Query: 491 GAFAGLVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 610
           G     ++SRPGQ GRADGYILEGKELEFYL+KIK+K++K
Sbjct: 96  GRLLACISSRPGQVGRADGYILEGKELEFYLKKIKNKKSK 135



 Score = 33.1 bits (72), Expect = 0.008
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 208 RKTRIIDVVYNASNND 255
           RK RIIDVVYNASNN+
Sbjct: 3   RKARIIDVVYNASNNE 18


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 296 YNNCILDKGLCTHQ 255
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 296 YNNCILDKGLCTHQ 255
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 296 YNNCILDKGLCTHQ 255
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,494
Number of Sequences: 2352
Number of extensions: 13294
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)