Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40517
(540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p pro... 62 5e-10
AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta pr... 62 5e-10
AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-P... 62 5e-10
AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p pro... 29 5.4
AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-P... 29 5.4
AY094906-1|AAM11259.1| 383|Drosophila melanogaster RH12404p pro... 28 9.4
AY075409-1|AAL68234.1| 336|Drosophila melanogaster LD33329p pro... 28 9.4
AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p pro... 28 9.4
AE014298-1745|AAF48135.2| 383|Drosophila melanogaster CG1488-PA... 28 9.4
AE014298-1744|AAN09641.1| 483|Drosophila melanogaster CG1488-PB... 28 9.4
AE014297-3829|AAN14061.1| 336|Drosophila melanogaster CG17383-P... 28 9.4
AE014297-3828|AAN14060.1| 336|Drosophila melanogaster CG17383-P... 28 9.4
AE014297-3827|AAF56485.1| 336|Drosophila melanogaster CG17383-P... 28 9.4
AE014297-3826|AAF56484.1| 336|Drosophila melanogaster CG17383-P... 28 9.4
AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA ... 28 9.4
>AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p
protein.
Length = 100
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/42 (66%), Positives = 29/42 (69%)
Frame = +2
Query: 254 MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 379
MWRFYTDDS MSLLFIASVFMLHIWGKY R+
Sbjct: 59 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 90 MPQSPSATSVGSGSRSPTKASAGPRTA 170
MP S+TSVGSGSRSP+K SA PR+A
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSA 26
>AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta
protein protein.
Length = 100
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/42 (66%), Positives = 29/42 (69%)
Frame = +2
Query: 254 MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 379
MWRFYTDDS MSLLFIASVFMLHIWGKY R+
Sbjct: 59 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 90 MPQSPSATSVGSGSRSPTKASAGPRTA 170
MP S+TSVGSGSRSP+K SA PR+A
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSA 26
>AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-PA
protein.
Length = 100
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/42 (66%), Positives = 29/42 (69%)
Frame = +2
Query: 254 MWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 379
MWRFYTDDS MSLLFIASVFMLHIWGKY R+
Sbjct: 59 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 90 MPQSPSATSVGSGSRSPTKASAGPRTA 170
MP S+TSVGSGSRSP+K SA PR+A
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSA 26
>AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p
protein.
Length = 570
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 93 PQSPSATSVGSGSRSPTKASAGPRTASG 176
PQ+P V SG+R PT S+ TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136
>AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-PA
protein.
Length = 573
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 93 PQSPSATSVGSGSRSPTKASAGPRTASG 176
PQ+P V SG+R PT S+ TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136
>AY094906-1|AAM11259.1| 383|Drosophila melanogaster RH12404p
protein.
Length = 383
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 171 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 61
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 118 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 152
>AY075409-1|AAL68234.1| 336|Drosophila melanogaster LD33329p
protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 32 LNVLSEYRT*SKVLQRLNKNASISECYLCRIWE*ITHK 145
L ++ EYR+ + R NK + Y+ IWE I HK
Sbjct: 31 LGLIREYRSHPVLYDRSNKRFK-DKLYVAHIWEQIAHK 67
>AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p
protein.
Length = 538
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 96 QSPSATSVGSGSRSPTKASAGPRTASG 176
+S S + GSGSRSP+++ +G + SG
Sbjct: 503 RSRSGSRSGSGSRSPSRSRSGSPSGSG 529
>AE014298-1745|AAF48135.2| 383|Drosophila melanogaster CG1488-PA,
isoform A protein.
Length = 383
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 171 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 61
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 118 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 152
>AE014298-1744|AAN09641.1| 483|Drosophila melanogaster CG1488-PB,
isoform B protein.
Length = 483
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 171 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 61
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 218 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 252
>AE014297-3829|AAN14061.1| 336|Drosophila melanogaster CG17383-PD,
isoform D protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 32 LNVLSEYRT*SKVLQRLNKNASISECYLCRIWE*ITHK 145
L ++ EYR+ + R NK + Y+ IWE I HK
Sbjct: 31 LGLIREYRSHPVLYDRSNKRFK-DKLYVAHIWEQIAHK 67
>AE014297-3828|AAN14060.1| 336|Drosophila melanogaster CG17383-PC,
isoform C protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 32 LNVLSEYRT*SKVLQRLNKNASISECYLCRIWE*ITHK 145
L ++ EYR+ + R NK + Y+ IWE I HK
Sbjct: 31 LGLIREYRSHPVLYDRSNKRFK-DKLYVAHIWEQIAHK 67
>AE014297-3827|AAF56485.1| 336|Drosophila melanogaster CG17383-PB,
isoform B protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 32 LNVLSEYRT*SKVLQRLNKNASISECYLCRIWE*ITHK 145
L ++ EYR+ + R NK + Y+ IWE I HK
Sbjct: 31 LGLIREYRSHPVLYDRSNKRFK-DKLYVAHIWEQIAHK 67
>AE014297-3826|AAF56484.1| 336|Drosophila melanogaster CG17383-PA,
isoform A protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 32 LNVLSEYRT*SKVLQRLNKNASISECYLCRIWE*ITHK 145
L ++ EYR+ + R NK + Y+ IWE I HK
Sbjct: 31 LGLIREYRSHPVLYDRSNKRFK-DKLYVAHIWEQIAHK 67
>AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA
protein.
Length = 538
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 96 QSPSATSVGSGSRSPTKASAGPRTASG 176
+S S + GSGSRSP+++ +G + SG
Sbjct: 503 RSRSGSRSGSGSRSPSRSRSGSPSGSG 529
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,109,204
Number of Sequences: 53049
Number of extensions: 325194
Number of successful extensions: 770
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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