Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40513
(657 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 141 1e-32
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 136 4e-31
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 113 3e-24
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 106 4e-22
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 99 8e-20
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 98 2e-19
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 97 3e-19
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 88 2e-16
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 86 8e-16
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 83 6e-15
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 81 2e-14
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 81 2e-14
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 79 7e-14
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 74 3e-12
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 69 8e-11
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 68 2e-10
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 65 2e-09
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 63 7e-09
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 61 2e-08
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 58 1e-07
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 53 7e-06
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 52 2e-05
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 49 9e-05
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 49 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 3e-04
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 46 8e-04
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 42 0.010
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 42 0.010
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 42 0.013
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 42 0.013
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 41 0.023
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 38 0.16
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 38 0.16
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 38 0.21
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 38 0.21
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 35 1.5
UniRef50_Q4QG46 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 35 2.0
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q3JKV4 Cluster: Putative uncharacterized protein; n=3; ... 33 8.0
UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG205... 33 8.0
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 141 bits (342), Expect = 1e-32
Identities = 59/81 (72%), Positives = 75/81 (92%)
Frame = +1
Query: 7 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 186
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+RNK+K +++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 187 RKRCNVNPARGPFHFRAPSKI 249
RKRCNVNPARGPFHFRAPS+I
Sbjct: 61 RKRCNVNPARGPFHFRAPSRI 81
Score = 102 bits (244), Expect = 9e-21
Identities = 47/94 (50%), Positives = 57/94 (60%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
K VRGMIPHKT+RG+ AL RLR +DG P P+D L+ R YC VGRL
Sbjct: 84 KAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRL 143
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLR 536
SHE+GW Y+DV++ LE KRK K L R L+
Sbjct: 144 SHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELK 177
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 518 YEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 613
+ ++LK++T A E ++KA PF II+SYGY
Sbjct: 172 HNRELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 136 bits (329), Expect = 4e-31
Identities = 60/82 (73%), Positives = 72/82 (87%)
Frame = +1
Query: 7 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFL 186
M G S K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FFRNK+K +++L
Sbjct: 1 MPGLSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYL 60
Query: 187 RKRCNVNPARGPFHFRAPSKIL 252
RKRCNVNPARGPFHFRAPS++L
Sbjct: 61 RKRCNVNPARGPFHFRAPSRML 82
Score = 108 bits (260), Expect = 1e-22
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
K VRGM+PHKT+RG NAL+RL+ Y+G P PFD CL+P R +C VGR+
Sbjct: 84 KAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVPTAMRQLCLRPDRKFCDVGRV 143
Query: 435 SHEIGWKYRDVVRKLEDKRKGKA 503
+HE+GWKYRDVV LE KRK K+
Sbjct: 144 AHEVGWKYRDVVNNLEAKRKIKS 166
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 113 bits (273), Expect = 3e-24
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = +1
Query: 25 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 204
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ FRNKLK +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 205 NPARGPFHFRAPSKIL*R 258
NP RGPFHFR+P++IL R
Sbjct: 64 NPRRGPFHFRSPARILWR 81
Score = 97.1 bits (231), Expect = 3e-19
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T+RGMIPHKT RG AL RL+ ++G PPP+D LKPGR +C +GRL
Sbjct: 81 RTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRL 140
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNL 533
+ E+GW++ D+V +LE+KRK K+ K+ L
Sbjct: 141 ATEVGWRHSDLVTRLEEKRKTKSAAFYARKKTL 173
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 106 bits (255), Expect = 4e-22
Identities = 49/86 (56%), Positives = 63/86 (73%)
Frame = +1
Query: 1 VKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMS 180
V +G S + IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG R K+K +
Sbjct: 2 VSGSGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLR 61
Query: 181 FLRKRCNVNPARGPFHFRAPSKIL*R 258
FLRKR N P+ GP HFRAPSKIL R
Sbjct: 62 FLRKRMNTKPSHGPIHFRAPSKILWR 87
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/107 (41%), Positives = 62/107 (57%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T+RGMIPHKT+RG AL RL+ Y+G PPP+D L+ G YC +G+L
Sbjct: 87 RTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGKL 146
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLRGSPRMLVRRCRRR 575
S E+GW + D +++LEDKRK +A ++ L R+ R RR
Sbjct: 147 SSEVGWNHYDTIKELEDKRKERAQVTYERRKQL-AKLRVKAERLPRR 192
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 99.1 bits (236), Expect = 8e-20
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +1
Query: 22 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 201
+K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ FRN++K FL K N
Sbjct: 75 DKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMN 134
Query: 202 VNPARGPFHFRAPSKIL*R 258
NP RG HFRAPS+I R
Sbjct: 135 HNPRRGVQHFRAPSRIFWR 153
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+ VRGM+PHKT +G AL RL+ ++G P P+D L+ R C +G L
Sbjct: 153 RAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQVVVDALKVQRLRNSRPVCKLGDL 212
Query: 435 SHEIGWKYRDVVRKLEDKRKGKA 503
S +GW + ++ KLE+KR+ +A
Sbjct: 213 SASVGWGKQTLIEKLEEKRRARA 235
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = +1
Query: 25 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 204
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+RNKLK ++FL K+ N
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNT 63
Query: 205 NPARGPFHFRAPSKI 249
NP+RGP+ F+APS+I
Sbjct: 64 NPSRGPYRFQAPSRI 78
Score = 48.8 bits (111), Expect(2) = 8e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 396 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 503
LKP R + ++GRL+H++GWKY+ V LE+ RK KA
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKA 133
Score = 23.4 bits (48), Expect(2) = 8e-06
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 258 TVRGMIPHKT 287
T RGM+PHKT
Sbjct: 82 TARGMLPHKT 91
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G RNK+K + +LRKR NP
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 211 ARGPFHFRAPSKIL*R 258
+GPFH RAPS + R
Sbjct: 85 TKGPFHHRAPSDVFVR 100
Score = 59.3 bits (137), Expect = 8e-08
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 252 MKTVRGMIPHKTERGKNALRRLRTYDGCPPPF-DNXXXXXXXXXXXXFCLKPGRNYCHVG 428
++TVR M+P T+RG AL L Y+G PP C + R Y +G
Sbjct: 99 VRTVRSMLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQRHVCYRSERPYTVLG 158
Query: 429 RLSHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLR 536
+ +GWKY DVV LE R KA + + LR
Sbjct: 159 NMCKHVGWKYSDVVANLEKARVEKASRHHEKQAKLR 194
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 88.2 bits (209), Expect = 2e-16
Identities = 37/76 (48%), Positives = 55/76 (72%)
Frame = +1
Query: 25 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 204
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G RN K S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 205 NPARGPFHFRAPSKIL 252
NP RGPFHF++PSKIL
Sbjct: 62 NPRRGPFHFKSPSKIL 77
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T++ MIPHKT RG AL+ L+ ++G P F +K R ++G++
Sbjct: 79 QTIKRMIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAFRYKVIKNYRKTVNLGKV 138
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLR 536
+GWK R + + D+ L K+ ++
Sbjct: 139 CEVLGWKNRKFIEQKSDQLAALGKVVLKKKKEIK 172
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K + + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 211 ARGPFHFRAPSKIL*R 258
RGPFHFRAP++I+ R
Sbjct: 64 LRGPFHFRAPAEIVRR 79
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/79 (44%), Positives = 47/79 (59%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T+RGMIP+KT RG +A+ RLR YDG PP CL+P R C VGR+
Sbjct: 79 RTIRGMIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAYLCLRPERRRCEVGRV 138
Query: 435 SHEIGWKYRDVVRKLEDKR 491
+HEIGW++ V + E +R
Sbjct: 139 AHEIGWQHAADVERYEKRR 157
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 83.0 bits (196), Expect = 6e-15
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +1
Query: 22 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCN 201
+K IVID +GHL GRLA++++K LL+G VVVVR E I +SG R ++ + KR N
Sbjct: 2 DKVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMN 61
Query: 202 VNPARGPFHFRAPSKI 249
NP +GP+H+ +PS++
Sbjct: 62 TNPKKGPYHYTSPSRL 77
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/91 (37%), Positives = 48/91 (52%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
KTVRGM+PHKT RG A R + Y+G P P+D L G +C +G
Sbjct: 80 KTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEALKVLRLGEGHRFCVLGDF 139
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKR 527
+IGWK+ +V++LE KR+ A + K+
Sbjct: 140 CEQIGWKHGAIVKELEAKRQTAASEYWAQKK 170
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 19 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRC 198
+NK VID GH+LGR+A+V+AK LL G K+V+VRCE + + G ++ + RKR
Sbjct: 8 NNKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRV 67
Query: 199 NVNPARGPFHFRAPSKIL 252
N NP RG FH R+P++++
Sbjct: 68 NTNPTRGAFHHRSPAEMV 85
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 211 ARGPFHFRAPSKIL*R 258
GPFH RAP +I R
Sbjct: 65 RDGPFHQRAPHEIFAR 80
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+ VRGMIP+KT RG +A L+ Y+G P + + + R +GRL
Sbjct: 80 RAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHALRCVSIHTDRPTTKLGRL 139
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKR 527
S +GWKY +VV +LE++RK ++ K K+
Sbjct: 140 STTMGWKYGNVVAQLEEQRKAESAKYFEAKK 170
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 79.4 bits (187), Expect = 7e-14
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D L+PG YC +G+L
Sbjct: 61 RTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQL 120
Query: 435 SHEIGWKYRDVVR 473
S E+GW Y D +R
Sbjct: 121 SKEVGWNYYDTIR 133
Score = 44.0 bits (99), Expect = 0.003
Identities = 31/86 (36%), Positives = 41/86 (47%)
Frame = +1
Query: 1 VKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMS 180
V +G +V+D R H+L RLA++IAK LL G +VV
Sbjct: 2 VSGSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV---------------------- 39
Query: 181 FLRKRCNVNPARGPFHFRAPSKIL*R 258
R N P+ GP HFR+P+KIL R
Sbjct: 40 ----RMNTKPSHGPIHFRSPAKILWR 61
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
++ID G + G+LAA +AK+LLEG +V VV E+ G+ R K +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 211 ARGPFHFRAP 240
RGPFHFR P
Sbjct: 67 RRGPFHFREP 76
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/93 (30%), Positives = 43/93 (46%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
K +R MI +K RGK A+ RL TY+G P + + P R Y +G+L
Sbjct: 82 KIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVKYTGNPNR-YVTLGKL 140
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNL 533
GWK+ + + L D+ K + K++L
Sbjct: 141 LSMFGWKHAEAAKSLTDELKERESLASLQKKDL 173
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 69.3 bits (162), Expect = 8e-11
Identities = 39/91 (42%), Positives = 53/91 (58%)
Frame = +1
Query: 55 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFR 234
+LGRLA+++AK L + +VRCE+I ISG R K+K M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITFV 60
Query: 235 APSKIL*RL*EV*SHTKQSVARMLLGGYVHM 327
+ L HT+ SVAR+ L G +M
Sbjct: 61 LHPRSFGALFVEWFHTRPSVARLHLLGCKYM 91
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 393 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLR 536
CLKPGR YCHVGRLSHE+GWKY+ V+ LE KR+ K + R ++
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMK 51
Score = 44.4 bits (100), Expect = 0.002
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 524 KKLKRITKDAGEKVSKATTPFTTIIQSYGYN 616
+K+KR+TK A +K+ K P+T +I+SYGYN
Sbjct: 48 RKMKRLTKKASKKIEKQVAPYTAVIKSYGYN 78
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +1
Query: 34 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPA 213
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 214 RGPFHFRAPSKIL*RL 261
GP+H R P I+ R+
Sbjct: 61 HGPYHPRRPDTIMTRM 76
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+ +RGM+P K GK A RLR Y G P + +P NY + L
Sbjct: 75 RMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAE---ITRPTANYTTMADL 131
Query: 435 SHEIGW 452
+GW
Sbjct: 132 GETVGW 137
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 19 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRC 198
+++ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG + FL
Sbjct: 10 TDRPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINS 69
Query: 199 NVNPARGPFHFRAPSKIL 252
+NP GP H+R P I+
Sbjct: 70 IINPKHGPVHYRRPDTII 87
Score = 32.7 bits (71), Expect = 8.0
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 KTVRGMIPH-KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGR 431
K +R M+P+ + GK +++RLR Y G P + K NY +G
Sbjct: 89 KMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKAKIK---KSPSNYTTMGE 145
Query: 432 LSHEIGW 452
L IGW
Sbjct: 146 LCRVIGW 152
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +1
Query: 7 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLK-LMSF 183
M+G +AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G R K L +
Sbjct: 1 MSG-KEEAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRW 59
Query: 184 LRKRCNVNP-ARGPFHFRAPSKIL*RL 261
+ + NP RGP + + P ++ R+
Sbjct: 60 VEWKTYYNPELRGPKYPKTPDRLFKRM 86
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +1
Query: 25 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 204
K IVIDGR L+GRLA+ I +L +G + V+RC+ + SG + +++ +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 205 NPARGPFHFRAPSKIL 252
NP +GP+ F PS +L
Sbjct: 63 NPNKGPYFFSNPSSLL 78
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 52.8 bits (121), Expect = 7e-06
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 34 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN--FFRNKLKLMSFLRKRCNVN 207
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN +K K + LR N
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTL--TN 60
Query: 208 PARGPFHFRAPSKIL*R 258
P RGPF+ + +I+ R
Sbjct: 61 PRRGPFYPKRSDEIVRR 77
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T+RGM+P KT+RG+ A RRL+ Y G P F + +P Y VG +
Sbjct: 77 RTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSRLSRP--KYVTVGEV 134
Query: 435 SHEIGWKY 458
+ +G K+
Sbjct: 135 AKFLGGKF 142
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +1
Query: 34 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPA 213
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G +N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 214 RGPFHFRAPSKIL*RL 261
+GPF+ R P I R+
Sbjct: 74 KGPFYPRRPDLIFRRV 89
Score = 41.1 bits (92), Expect = 0.023
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+ VRGM+P KT+RG+ A +RLR Y G P + Y +G L
Sbjct: 88 RVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGEL 147
Query: 435 SHEIGWK 455
S E+G++
Sbjct: 148 SEELGYQ 154
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +1
Query: 34 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPA 213
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + + K +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKE 74
Query: 214 RGPFHFRAPSKIL*R 258
+GP+ R P +I R
Sbjct: 75 KGPYFPRHPERIFKR 89
Score = 39.5 bits (88), Expect = 0.069
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCP 338
+TVRGM+P K+ RG++A RRLR + G P
Sbjct: 89 RTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1
Query: 7 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 150
+ G + IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+
Sbjct: 3 LAGGEAREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD 50
Score = 39.9 bits (89), Expect = 0.053
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 261 VRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSH 440
VRGM+P RG+ AL RLR Y G P D + +Y +G ++
Sbjct: 89 VRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRFPEADASRLSSHYIELGAVAR 145
Query: 441 EIGWK 455
++GWK
Sbjct: 146 QLGWK 150
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 291 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 443
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGNFFRNKLKLMSFLRK---- 192
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ + F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 193 RCNVNPAR-GPFHFRAPSKIL*RL 261
R + NP + GP R P ++ R+
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRI 99
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCP 338
+ VRGM+P K+E G++AL+RLR Y P
Sbjct: 98 RIVRGMLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
I ID H+ GRL++ +AK LL G + +V ++ I+G R + + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG---RKEFIIDKFNNLRNTGSI 58
Query: 211 ARGPFHFRAPSKIL*R 258
+GP++ + +IL R
Sbjct: 59 RKGPYYPKTADRILKR 74
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 34 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ L + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 211 ARGPFHFRAPSKIL*R 258
GP+ + P +IL R
Sbjct: 60 EFGPYFPKRPDRILKR 75
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 434
+T+RGM+P+K RG++A+ RL+ Y G P++ L Y +G +
Sbjct: 75 RTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADADMRLLSSNKYVELGEV 132
Query: 435 SHEIGWKY 458
S ++G K+
Sbjct: 133 SQKMGSKF 140
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
+V+D R +LGR+++ +A+ +L+G V VV E+ I+G N+ M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITG----NEEATMETYHTRAELGS 65
Query: 211 ARGPFHFRAPSKIL*R 258
GP++ + P +I R
Sbjct: 66 DSGPYYPKRPDRIFKR 81
Score = 36.3 bits (80), Expect = 0.65
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCP 338
+ +RGM+P+KTE G+ AL +R Y G P
Sbjct: 81 RAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 10 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLR 189
T + ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG R L
Sbjct: 3 TQVQEQVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLT 62
Query: 190 KRCNVNPAR-GPFHFRAPSKIL*R 258
+ NP R G R+P I+ R
Sbjct: 63 VKTLFNPYRNGIRRPRSPINIVKR 86
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 41.1 bits (92), Expect = 0.023
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K + ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 211 AR-GPFHFRAPSKIL*RL 261
+ GP + R P I+ R+
Sbjct: 62 KKMGPKYPRRPDDIVRRV 79
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 38.3 bits (85), Expect = 0.16
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVRCEQINISGNFFRNKLKLMSFLRK 192
+V D +LGRLA+ IAK LL EG+ +V+++ E ++G ++++ L + RK
Sbjct: 7 LVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP--KDRI-LADYDRK 63
Query: 193 RCNVNPARGPFHFRAPSKIL*R 258
+P +GPF R P IL R
Sbjct: 64 YKLNHPRKGPFFPRMPDMILKR 85
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 147
+++D +LGR++ IAK+L G KV VV E+ ISG
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISG 46
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 435 SHEIGWKYRDVVRKLEDKRKGKAVKELPMKRNLRGSPRMLVRRCRRR 575
+HE+GW+Y+ +V KLE+KRK K K+ R + + + +
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKAK 47
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 37.9 bits (84), Expect = 0.21
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNP 210
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + +++ KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITG----REEQIVEKYEKRVDIGN 65
Query: 211 ARGPFHFRAPSKIL*R 258
G F+ + P I R
Sbjct: 66 DNGYFYPKRPDGIFKR 81
Score = 37.9 bits (84), Expect = 0.21
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCP 338
+T+RGM+PHK +RG+ A +R Y G P
Sbjct: 81 RTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 31 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFRNK 165
++I+ + +LGRLA+ + K LL + + +V+ QI ++GN ++NK
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK 47
>UniRef50_Q4QG46 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1445
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 162 VPKEVARDVDLFAANHNN-----FVPFEKDLGDDCRQTAQQMTTAIDHYGLI 22
VP ++ R+ HNN FVPF ++ +D QT QQ+ +A+ H GL+
Sbjct: 271 VPADMNRNATSNMKGHNNGDPGDFVPFAREEKEDPIQTTQQLYSAVCHAGLV 322
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 255 KTVRGMIPHKTERGKNALRRLRTYDGCP 338
+ +RGM+P KT RG+ L+ ++ Y G P
Sbjct: 79 RVIRGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 233 LKWKGPRAGFTLHLLRRNDISLSLFLKKLPEMLICSQRTTTTLFPSRR 90
L+W+ R+G + + + +S S F+KK+P + SQ T+ P RR
Sbjct: 23 LEWRACRSGESPYKFQSLSVSRSKFIKKVPSGRVISQSTSAFWLPFRR 70
>UniRef50_Q3JKV4 Cluster: Putative uncharacterized protein; n=3;
Burkholderia pseudomallei|Rep: Putative uncharacterized
protein - Burkholderia pseudomallei (strain 1710b)
Length = 780
Score = 32.7 bits (71), Expect = 8.0
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 393 CLKPGRNYCHVGRLSHEIGWK-YRDVVRKLEDKRKGKAVKELPMKR-NLRGSPRMLVRRC 566
CL+ GR V H+ + RDVVR+ +R+ + + L + R R R +VRR
Sbjct: 211 CLRGGRGRALVVDAEHQRRARGRRDVVRRARRERRPRVRRGLELGRLRARALERHVVRRL 270
Query: 567 RRRQHH 584
RRR H
Sbjct: 271 RRRHLH 276
>UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG20539;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG20539 - Caenorhabditis
briggsae
Length = 668
Score = 32.7 bits (71), Expect = 8.0
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = -1
Query: 486 CLQAYEQHHGISIQFHGT-VCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHM--YV 316
CL Y HHG Q HGT HD + H E GTHH Y
Sbjct: 450 CLAYYGTHHGTHDQSHGTHGGYHDPAHHGTHHATHYESHGTHGGYHDPAHHGTHHATHYE 509
Query: 315 AS*EHSCHALFCVGSY 268
+ H H+L G++
Sbjct: 510 SHGTHGHHSLAYYGTH 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,426,126
Number of Sequences: 1657284
Number of extensions: 13923467
Number of successful extensions: 36008
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 34863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35987
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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