Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40512
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p pro...   100   4e-21
AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC...   100   4e-21
AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB...   100   4e-21
AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA...    29   6.4  
AE014297-3683|AAN14030.1|  217|Drosophila melanogaster CG31238-P...    29   8.5  
AE014296-425|AAN12217.1| 1102|Drosophila melanogaster CG32305-PA...    29   8.5  

>AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p
           protein.
          Length = 228

 Score = 99.5 bits (237), Expect = 4e-21
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +1

Query: 1   FKSKFLAYISGQASIYFXXXXXXXXXXXXDAIREMQKYSNIEPSDHQHLDAEMQGNMRLF 180
           FKSKFL+ +  QA IYF            +AIREM+KYS ++ S+  HL+ EMQ +M+LF
Sbjct: 36  FKSKFLSMLGQQAHIYFLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLF 95

Query: 181 RAQRNFYISGFALFLLVVIRRLVQI 255
           RAQRNFYISGFA+FL +VIRRLV +
Sbjct: 96  RAQRNFYISGFAIFLALVIRRLVNL 120



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = +3

Query: 267 ATLLAQSEANFXXXXXXXXXXXXLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXX 428
           A L+AQSEA+F            LLE + T      GE+ +  E+  LR ++        
Sbjct: 125 ANLMAQSEASFKQAQSATAAARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLN 184

Query: 429 XXXXXXXAVKSQAEGLNKEYDRLAEEQASYRK 524
                  AVKSQAE +N+EYDRL EE +  +K
Sbjct: 185 REKKDKEAVKSQAESINREYDRLTEEYSKLQK 216


>AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC,
           isoform C protein.
          Length = 228

 Score = 99.5 bits (237), Expect = 4e-21
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +1

Query: 1   FKSKFLAYISGQASIYFXXXXXXXXXXXXDAIREMQKYSNIEPSDHQHLDAEMQGNMRLF 180
           FKSKFL+ +  QA IYF            +AIREM+KYS ++ S+  HL+ EMQ +M+LF
Sbjct: 36  FKSKFLSMLGQQAHIYFLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLF 95

Query: 181 RAQRNFYISGFALFLLVVIRRLVQI 255
           RAQRNFYISGFA+FL +VIRRLV +
Sbjct: 96  RAQRNFYISGFAIFLALVIRRLVNL 120



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = +3

Query: 267 ATLLAQSEANFXXXXXXXXXXXXLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXX 428
           A L+AQSEA+F            LLE + T      GE+ +  E+  LR ++        
Sbjct: 125 ANLMAQSEASFKQAQSATAAARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLN 184

Query: 429 XXXXXXXAVKSQAEGLNKEYDRLAEEQASYRK 524
                  AVKSQAE +N+EYDRL EE +  +K
Sbjct: 185 REKKDKEAVKSQAESINREYDRLTEEYSKLQK 216


>AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB,
           isoform B protein.
          Length = 228

 Score = 99.5 bits (237), Expect = 4e-21
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = +1

Query: 1   FKSKFLAYISGQASIYFXXXXXXXXXXXXDAIREMQKYSNIEPSDHQHLDAEMQGNMRLF 180
           FKSKFL+ +  QA IYF            +AIREM+KYS ++ S+  HL+ EMQ +M+LF
Sbjct: 36  FKSKFLSMLGQQAHIYFLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLF 95

Query: 181 RAQRNFYISGFALFLLVVIRRLVQI 255
           RAQRNFYISGFA+FL +VIRRLV +
Sbjct: 96  RAQRNFYISGFAIFLALVIRRLVNL 120



 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = +3

Query: 267 ATLLAQSEANFXXXXXXXXXXXXLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXX 428
           A L+AQSEA+F            LLE + T      GE+ +  E+  LR ++        
Sbjct: 125 ANLMAQSEASFKQAQSATAAARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLN 184

Query: 429 XXXXXXXAVKSQAEGLNKEYDRLAEEQASYRK 524
                  AVKSQAE +N+EYDRL EE +  +K
Sbjct: 185 REKKDKEAVKSQAESINREYDRLTEEYSKLQK 216


>AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = -1

Query: 367 CSSPVPCFSNKXXXXXXXXXAWRKFASD*ANNVASCEIFEPNDE*RQGG-KVQSQICRSF 191
           CS P  C +N             K ASD +  +  C I EPN   R  G + Q Q C SF
Sbjct: 114 CSKPTDCATNDEPSCRG-----NKSASDKSLKITRCSIPEPNKSPRSDGHENQRQSCVSF 168


>AE014297-3683|AAN14030.1|  217|Drosophila melanogaster CG31238-PA
           protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 204 IWLCTFPPCRHSSFGSNISQLATLLAQSEANF 299
           +WL  F PC H+  G    Q    L  S ANF
Sbjct: 169 VWLLAFRPCYHAGQGYQAGQTWPNLRSSLANF 200


>AE014296-425|AAN12217.1| 1102|Drosophila melanogaster CG32305-PA
           protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 587 CMSLILMKLNVVYAASSITVLIYSKSILILVCHCYLNVFRKL 712
           C  L +M +N++  A+   +L+    +LIL+  C L  ++KL
Sbjct: 554 CAGLAIMSINLIEEATYPDILVLLGILLILLILCILAGYKKL 595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,441,921
Number of Sequences: 53049
Number of extensions: 470746
Number of successful extensions: 1436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)