Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40498
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q538A5 Cluster: Chorion b-ZIP transcription factor; n=1...   138   1e-31
UniRef50_Q87N58 Cluster: Paraquat-inducible protein A; n=32; Gam...    33   4.2  
UniRef50_Q20731 Cluster: Putative uncharacterized protein rdy-2;...    33   7.3  
UniRef50_Q30UG2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.6  
UniRef50_Q8MRK6 Cluster: GH27233p; n=1; Drosophila melanogaster|...    32   9.6  
UniRef50_A1ZAP8 Cluster: CG30460-PC, isoform C; n=5; Drosophila ...    32   9.6  

>UniRef50_Q538A5 Cluster: Chorion b-ZIP transcription factor; n=1;
           Bombyx mori|Rep: Chorion b-ZIP transcription factor -
           Bombyx mori (Silk moth)
          Length = 512

 Score =  138 bits (334), Expect = 1e-31
 Identities = 65/85 (76%), Positives = 66/85 (77%)
 Frame = +2

Query: 2   ALDDSWAYPEPVXXXXXXXXXXXXXXXXXXXLPLTEDDSCDAKIISFLPSEVENCDVFLP 181
           ALDDSWAYPEPV                   LPLTEDDSCDAKIISFLPSEVENCDVFLP
Sbjct: 193 ALDDSWAYPEPVNWTNTFNTDNTINTDTQKTLPLTEDDSCDAKIISFLPSEVENCDVFLP 252

Query: 182 KLIDQCDDAVLQKEGMHKCERGLSM 256
           KLIDQCDDAVLQKEGMHKCERGLS+
Sbjct: 253 KLIDQCDDAVLQKEGMHKCERGLSI 277



 Score = 79.8 bits (188), Expect = 5e-14
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +1

Query: 256 DVGIRTPSWPADAISTPEVLSYVEQLEKEKCSRAFK 363
           DVGIRTPSWPADAISTPEVLSYVEQLEKEKCSRAFK
Sbjct: 278 DVGIRTPSWPADAISTPEVLSYVEQLEKEKCSRAFK 313


>UniRef50_Q87N58 Cluster: Paraquat-inducible protein A; n=32;
           Gammaproteobacteria|Rep: Paraquat-inducible protein A -
           Vibrio parahaemolyticus
          Length = 443

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -2

Query: 106 GQGQCFLCVCVYSVICVECVGPVD--WFW 26
           G G  F   CVY+++ V+C+  VD  W W
Sbjct: 178 GMGSSFWAFCVYTILVVKCISMVDKSWLW 206


>UniRef50_Q20731 Cluster: Putative uncharacterized protein rdy-2;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein rdy-2 - Caenorhabditis elegans
          Length = 365

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -3

Query: 249 SPLSHLCIPSFCKTASSH*SMSLGKNTSQ-FSTSLGRKEIIFASQESSSVKGNVFCVSVF 73
           +PL H  +  +   +SSH   ++ ++  Q +  +  R+  +F+ +   +  G VFC+ +F
Sbjct: 109 TPLHHFPVNQYSSASSSHHPPTINQSQQQIYQRNTTRRRKMFSQR---AFNGIVFCIRIF 165

Query: 72  IVLSVL 55
           I++S L
Sbjct: 166 ILVSFL 171


>UniRef50_Q30UG2 Cluster: Putative uncharacterized protein; n=1;
           Thiomicrospira denitrificans ATCC 33889|Rep: Putative
           uncharacterized protein - Thiomicrospira denitrificans
           (strain ATCC 33889 / DSM 1351)
          Length = 781

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = -1

Query: 503 IEATILFLKASG*IKSCSKH*F*NISIFVEPLWSVLLCILSTKYRTTLNAREHFSFSNC 327
           +E   L     G +K C  +      I  EPL S  L IL +  +  LN  EH +FS C
Sbjct: 706 LEFYYLLASTLGQVKECGYYDLKESKIVTEPLLSEKLSILGSHVKDLLNI-EHLNFSKC 763


>UniRef50_Q8MRK6 Cluster: GH27233p; n=1; Drosophila
           melanogaster|Rep: GH27233p - Drosophila melanogaster
           (Fruit fly)
          Length = 1006

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +3

Query: 51  HSTQITL*TQTHKKHCP*PKTTLVMQKLFLSCQVKSKIVMYFYLNSSISVMMQFYKKKEC 230
           H +  TL  Q  ++        L ++ L  SC   SK V Y  LNSS+ V MQ  + K  
Sbjct: 315 HQSSATLVRQARRRIRTKENPDLELRALQSSCSAISKDVQYASLNSSL-VPMQRNQSKVY 373

Query: 231 TSAKEDFP 254
           + ++ED P
Sbjct: 374 SGSEEDSP 381


>UniRef50_A1ZAP8 Cluster: CG30460-PC, isoform C; n=5; Drosophila
           melanogaster|Rep: CG30460-PC, isoform C - Drosophila
           melanogaster (Fruit fly)
          Length = 1868

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +3

Query: 51  HSTQITL*TQTHKKHCP*PKTTLVMQKLFLSCQVKSKIVMYFYLNSSISVMMQFYKKKEC 230
           H +  TL  Q  ++        L ++ L  SC   SK V Y  LNSS+ V MQ  + K  
Sbjct: 663 HQSSATLVRQARRRIRTKENPDLELRALQSSCSAISKDVQYASLNSSL-VPMQRNQSKVY 721

Query: 231 TSAKEDFP 254
           + ++ED P
Sbjct: 722 SGSEEDSP 729


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,229,213
Number of Sequences: 1657284
Number of extensions: 10562650
Number of successful extensions: 23608
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23593
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)