Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40492
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 2e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 1e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 127 2e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 120 4e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 108 1e-22
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 103 4e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 9e-21
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 100 3e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 92 1e-17
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 91 2e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 89 9e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 89 9e-17
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 75 1e-12
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 71 2e-11
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 70 5e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 70 6e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 70 6e-11
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 52 1e-05
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 50 4e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 6e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 44 0.003
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.008
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.032
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 40 0.042
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.074
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.13
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 38 0.30
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.52
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.69
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 2.1
UniRef50_A4S2V3 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 2.8
UniRef50_UPI00006CB684 Cluster: hypothetical protein TTHERM_0044... 33 4.9
UniRef50_Q09743 Cluster: Protein ste16; n=1; Schizosaccharomyces... 33 4.9
UniRef50_A3IB66 Cluster: Dipeptide ABC transporter, dipeptide-bi... 33 6.4
UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gamb... 33 6.4
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.4
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.5
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 8.5
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (349), Expect = 2e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +1
Query: 244 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 423
F + +L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 424 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 507
GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 122 bits (294), Expect = 8e-27
Identities = 56/66 (84%), Positives = 61/66 (92%)
Frame = +2
Query: 56 IVDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 235
+VDPFTRKDWYDV+AP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 236 ERSFRK 253
ERSFRK
Sbjct: 81 ERSFRK 86
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/56 (67%), Positives = 49/56 (87%)
Frame = +3
Query: 513 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEIS 680
II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLS 229
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (318), Expect = 1e-29
Identities = 60/90 (66%), Positives = 73/90 (81%)
Frame = +1
Query: 244 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 423
F + +LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 424 GFTNKDSLSQRKTCYAQHTQVRAIRKKMLK 513
GFT K + RKT YAQH QVR IRKKM++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 103 bits (248), Expect = 3e-21
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = +2
Query: 56 IVDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 235
+VDPF++KDWYDV+AP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 236 ERSFR 250
R F+
Sbjct: 81 FRKFK 85
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/61 (65%), Positives = 53/61 (86%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
+K+ +EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 675 I 677
+
Sbjct: 225 L 225
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 127 bits (307), Expect = 2e-28
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = +1
Query: 238 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 417
+ + +IRL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 418 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 507
CI FT K +KTCYAQ +Q+R IR+KM
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKM 563
Score = 99.5 bits (237), Expect = 7e-20
Identities = 46/64 (71%), Positives = 55/64 (85%)
Frame = +2
Query: 62 DPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 241
DPF +KDWYD++APS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 242 SFRK 253
++RK
Sbjct: 475 AYRK 478
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Frame = +3
Query: 474 AHSGQSNQ--KENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 647
A S Q Q ++ EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKV
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKV 610
Query: 648 KVLKRPRFEI 677
K+LK P+F++
Sbjct: 611 KILKAPKFDL 620
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 120 bits (288), Expect = 4e-26
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = +1
Query: 238 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 417
+VF +I+L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 418 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMLKSLHAT 528
I FT K ++KT YA+ ++V+AIRKKM+ L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
Frame = +2
Query: 59 VDPFTRKDWYDVRAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 226
VDPFTRK+WY VRAP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 227 TDAERSFRK 253
D + FRK
Sbjct: 74 DDESQVFRK 82
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 108 bits (259), Expect = 1e-22
Identities = 50/98 (51%), Positives = 70/98 (71%)
Frame = +1
Query: 244 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 423
F +I+L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 424 GFTNKDSLSQRKTCYAQHTQVRAIRKKMLKSLHATSLT 537
T + +KT YA +Q+RAIR+KM + + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.8 bits (203), Expect = 9e-16
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +2
Query: 62 DPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 241
DPF RKDWY ++AP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 242 SFRK 253
+FRK
Sbjct: 80 AFRK 83
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/61 (49%), Positives = 48/61 (78%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
+++ EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F+
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFD 224
Query: 675 I 677
+
Sbjct: 225 L 225
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 103 bits (247), Expect = 4e-21
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = +1
Query: 238 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 417
K + +++L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 418 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKM 507
+ FT K S S TCYA+ +QVRAIR+K+
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +2
Query: 59 VDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 238
+DP +RK+WYD RAP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 239 RSFRK 253
+++RK
Sbjct: 82 KAWRK 86
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 516 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
IT + + E LI + K IEK I+PL+++ IRKVKVLKRP+ +
Sbjct: 178 ITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLD 230
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 9e-21
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 268 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 447
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 448 SQRKTCYAQHTQVRAIRKKM 507
+KT YA+ Q++ IRK M
Sbjct: 151 QIKKTSYAKSAQIKKIRKIM 170
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = +2
Query: 56 IVDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 217
I +PF++K+WY+V+ P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 100 bits (240), Expect = 3e-20
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = +1
Query: 241 VFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 420
+F + +L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 421 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMLK 513
I FT K Q+ YAQ T+++ +R ++++
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 501 ENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 677
E VE++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDL 150
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +2
Query: 59 VDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 238
VD ++KDWYD++AP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 239 RSFR 250
R F+
Sbjct: 82 RKFK 85
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2
Query: 56 IVDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 235
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 236 ERSFR 250
R F+
Sbjct: 78 FRKFK 82
Score = 91.1 bits (216), Expect = 2e-17
Identities = 39/61 (63%), Positives = 53/61 (86%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
+K+ +EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFE 171
Query: 675 I 677
+
Sbjct: 172 L 172
Score = 47.2 bits (107), Expect = 4e-04
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 FPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD-GYVLRVFC 420
F + +LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D V+
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTNDLKEVVNKLI 136
Query: 421 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMLK 513
KD ++ Y H V + KMLK
Sbjct: 137 PDSIGKDVEKACQSIYPLH-DVFVRKVKMLK 166
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 89.0 bits (211), Expect = 9e-17
Identities = 35/94 (37%), Positives = 61/94 (64%)
Frame = +1
Query: 238 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 417
+ + ++R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 418 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMLKSL 519
+ FT + Q + CYA+ V+ +R ++ K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 62 DPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 241
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 242 SFRK 253
++RK
Sbjct: 83 AYRK 86
Score = 41.5 bits (93), Expect = 0.018
Identities = 17/55 (30%), Positives = 38/55 (69%)
Frame = +3
Query: 510 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+
Sbjct: 173 KMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFD 227
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 89.0 bits (211), Expect = 9e-17
Identities = 39/88 (44%), Positives = 61/88 (69%)
Frame = +1
Query: 250 QIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 429
+++LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I F
Sbjct: 82 KVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAF 141
Query: 430 TNKDSLSQRKTCYAQHTQVRAIRKKMLK 513
T QRKT YAQ +Q++ IRKK+++
Sbjct: 142 TKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +2
Query: 59 VDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 238
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 239 RSFRK 253
++RK
Sbjct: 78 MAWRK 82
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/60 (35%), Positives = 43/60 (71%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
+K+ VEI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ +
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +1
Query: 280 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 459
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 460 TCYAQHTQVRAIRKKMLKSL 519
YA + R +R M+K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 453
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 454 RKTCYAQHTQVRAIRKKM 507
+KTCY +H+ + IRK M
Sbjct: 103 KKTCYVKHSDEKKIRKIM 120
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/62 (29%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 477 HSGQSN-QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 653
HS + +K ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK
Sbjct: 110 HSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKT 169
Query: 654 LK 659
+K
Sbjct: 170 IK 171
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 71.3 bits (167), Expect = 2e-11
Identities = 28/57 (49%), Positives = 44/57 (77%)
Frame = +3
Query: 507 VEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 677
+ I D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++
Sbjct: 152 ITIQIMDQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDL 208
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 241 VFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 420
V + +LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 421 IGF-TNKDSLSQRKTCYAQHTQVRAI 495
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +2
Query: 74 RKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 250
+KD YDV+A +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +3
Query: 558 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 677
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFEL 40
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +1
Query: 301 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 480
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 481 QVRAIRKKM 507
Q RA+R+++
Sbjct: 156 QKRALRRRI 164
Score = 36.3 bits (80), Expect = 0.69
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 510 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 659
+II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 166 DIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 259 LIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 438
L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++
Sbjct: 86 LQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDR 145
Query: 439 DSLSQRKTCYAQHTQVRAIRKKMLKSLH 522
+RK C+ + +R +R + ++LH
Sbjct: 146 FRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 62 DPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 217
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 453
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 454 RKTCYAQHTQVRAIRKKMLKSLHATSLTLNSGRW 555
+K+ A+RKKM+++L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = -1
Query: 232 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSPDIVPIFASEWVDNL 53
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR +++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 52 LLNTFFTALRQAFIFPD 2
LL++ F L +FPD
Sbjct: 136 LLSSLF-PLGNPLVFPD 151
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 307 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 456
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 453
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 454 RKT 462
KT
Sbjct: 137 IKT 139
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 674
+K+ E +T E V +I D +++ K IYP+R + IRK +VL P +
Sbjct: 142 RKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEK 201
Query: 675 I 677
I
Sbjct: 202 I 202
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 44.4 bits (100), Expect = 0.003
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 453
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 454 RKTCYAQHTQVRAIRKKMLK 513
T A+ +Q RAIRK+M K
Sbjct: 119 --TRRAKTSQQRAIRKEMFK 136
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 495 QKENVEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRKVKVLKR 662
+KE ++I + + E + + + +SI + I++A IYP+R IRK +VL+
Sbjct: 131 RKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEE 190
Query: 663 P 665
P
Sbjct: 191 P 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 42.7 bits (96), Expect = 0.008
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +1
Query: 313 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 492
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 493 IRKKMLKSLHATS 531
IR+ M+ +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.032
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 268 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 438
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 59 VDPFTRKDWYDVRAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 226
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 40.3 bits (90), Expect = 0.042
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 56 IVDPFTRKDWYDVRAPSMFSKRQVGTT 136
++D F++KDWYDV+A +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.074
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 151 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIRLIAEYVQGRNVLCNFHGMDLTT 324
P N+ N GRI S R T+ H K ++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 325 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 462
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.13
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 450
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 451 QRKTCYAQHTQV 486
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 37.5 bits (83), Expect = 0.30
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +1
Query: 157 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLR 336
+E+ GRI + + F G T H V + R ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 337 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 438
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.52
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 277 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 432
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.69
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 274 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 453
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 454 RKT 462
+K+
Sbjct: 130 QKS 132
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 566 QLVHHLPEFRVSDVACNDFNIFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 411
+L+H + S AC D FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.7 bits (76), Expect = 2.1
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +1
Query: 313 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 492
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 493 IRKKMLKSLHATS 531
IR+ M+ + T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_A4S2V3 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 475
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 444 LEPTQDVLRPAHSGQSNQKENVEIITRDVTNSELREVVNKLIPDSIAKDIEK 599
+E +D L AH+ ENVE + + T +E R+ + I D+ K++E+
Sbjct: 361 IEQLRDELEHAHALSDTLAENVETLRAEATRAEKRKTIELAIKDARIKELEE 412
>UniRef50_UPI00006CB684 Cluster: hypothetical protein
TTHERM_00446420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446420 - Tetrahymena
thermophila SB210
Length = 1054
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 444 LEPTQDVLRPAHSGQSNQKENVEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 614
L+P Q V + GQ+NQ +N E +++ N+ RE V +L PDS+ + +K H I
Sbjct: 471 LQPNQAVNKTFSEGQTNQNQNQENY-QNINNT--REDVGQL-PDSLGQPFQKQFHSI 523
>UniRef50_Q09743 Cluster: Protein ste16; n=1; Schizosaccharomyces
pombe|Rep: Protein ste16 - Schizosaccharomyces pombe
(Fission yeast)
Length = 1309
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 417 LHWFHQ*GLLEPTQDVLRPAHSGQ--SNQKENVEIITRDVTNSELREVVNKL 566
LHW+ L+ +Q + P H+GQ S + NVE + V E +++ L
Sbjct: 1162 LHWYSLMSLMGTSQGICIPRHAGQVLSTPRRNVEFVNERVPTPEFSSLLSSL 1213
>UniRef50_A3IB66 Cluster: Dipeptide ABC transporter,
dipeptide-binding protein; n=1; Bacillus sp. B14905|Rep:
Dipeptide ABC transporter, dipeptide-binding protein -
Bacillus sp. B14905
Length = 532
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 169 SNFRSLGTVDKRGADLPLAEHRRSPDIVPIFASEWVDNLLLNTFFTALRQ 20
SN +S G D + + + R PD + + + WVDN N + T L++
Sbjct: 29 SNEQSSGNGDSKSKNTLVISSVREPDTIDVHKTTWVDNSTANIYDTLLKR 78
>UniRef50_Q7PR93 Cluster: ENSANGP00000010616; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010616 - Anopheles gambiae
str. PEST
Length = 304
Score = 33.1 bits (72), Expect = 6.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 474 AHSGQSNQKENVEIITRDVTNSELREVVNKLIPDSIAKDIEK 599
A QSN+KE +++ DV+ E+ +V K + + K++EK
Sbjct: 199 AAEAQSNEKETKDVVMEDVSVQEVGKVSEKEVEKVVEKEVEK 240
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 301 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 459
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 311 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 436
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 32.7 bits (71), Expect = 8.5
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 238 KVFPQIRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 417
K + ++R + V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 418 CIGFTNKDSLSQRK 459
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,747,173
Number of Sequences: 1657284
Number of extensions: 14486231
Number of successful extensions: 43207
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43200
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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