Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40483
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 152 7e-36
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 152 7e-36
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 140 2e-32
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 136 5e-31
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 132 6e-30
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 124 1e-27
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 113 3e-24
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 111 2e-23
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 100 5e-20
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 88 2e-16
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 87 3e-16
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 85 1e-15
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 80 3e-14
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 77 3e-13
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 59 7e-08
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 58 2e-07
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 57 3e-07
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 56 6e-07
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 52 1e-05
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 51 2e-05
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 48 2e-04
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 46 7e-04
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 46 0.001
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 43 0.005
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 43 0.006
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 41 0.020
UniRef50_UPI0000ECA0AF Cluster: UPI0000ECA0AF related cluster; n... 34 3.0
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 33 5.2
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 5.2
UniRef50_A7EWX7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 9.1
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.1
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 152 bits (368), Expect = 7e-36
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
P KKRKYE GRP NT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRII
Sbjct: 20 PYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRII 79
Query: 183 DVVYNASNNELVRTKTLVKNAIVV 254
DVVYNASNNELVRTKTLVKN IV+
Sbjct: 80 DVVYNASNNELVRTKTLVKNCIVL 103
Score = 84.2 bits (199), Expect = 2e-15
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +2
Query: 236 QECNCCIDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 391
+ C ID+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 98 KNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 152 bits (368), Expect = 7e-36
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
P KKRKYE GRP NT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRII
Sbjct: 20 PYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRII 79
Query: 183 DVVYNASNNELVRTKTLVKNAIVV 254
DVVYNASNNELVRTKTLVKN IV+
Sbjct: 80 DVVYNASNNELVRTKTLVKNCIVL 103
Score = 140 bits (340), Expect = 2e-32
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +2
Query: 236 QECNCCIDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAK 415
+ C ID+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK
Sbjct: 98 KNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAK 157
Query: 416 VEGALEEQFHTGRLLACVASRPGQCGRADGY 508
+ LEEQF G+LLAC+ASRPGQCGRADGY
Sbjct: 158 ISSLLEEQFQQGKLLACIASRPGQCGRADGY 188
Score = 36.7 bits (81), Expect = 0.42
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKRAK 567
+LEGKELEFYLRKIK+++ K
Sbjct: 189 VLEGKELEFYLRKIKARKGK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 140 bits (340), Expect = 2e-32
Identities = 62/91 (68%), Positives = 73/91 (80%)
Frame = +2
Query: 236 QECNCCIDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAK 415
+ C ID+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK
Sbjct: 78 KNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAK 137
Query: 416 VEGALEEQFHTGRLLACVASRPGQCGRADGY 508
+ LEEQF G+LLAC+ASRPGQCGRADGY
Sbjct: 138 ISSLLEEQFQQGKLLACIASRPGQCGRADGY 168
Score = 91.9 bits (218), Expect = 1e-17
Identities = 52/84 (61%), Positives = 57/84 (67%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
P KKRKYE GRP NT++GP+RIH+VR RGG C TRKTRII
Sbjct: 20 PYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRII 59
Query: 183 DVVYNASNNELVRTKTLVKNAIVV 254
DVVYNASNNELVRTKTLVKN IV+
Sbjct: 60 DVVYNASNNELVRTKTLVKNCIVL 83
Score = 36.7 bits (81), Expect = 0.42
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKRAK 567
+LEGKELEFYLRKIK+++ K
Sbjct: 169 VLEGKELEFYLRKIKARKGK 188
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 136 bits (328), Expect = 5e-31
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
+RKKRK+E GRP NT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI D
Sbjct: 21 LRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIAD 80
Query: 186 VVYNASNNELVRTKTLVKNAIVV 254
VVYNASNNELVRTKTLVKN+IVV
Sbjct: 81 VVYNASNNELVRTKTLVKNSIVV 103
Score = 126 bits (305), Expect = 3e-28
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGA 427
IDATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE A
Sbjct: 104 IDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQA 163
Query: 428 LEEQFHTGRLLACVASRPGQCGRADGY 508
LE+QF +GR+LAC++SRPGQCGR+DGY
Sbjct: 164 LEDQFTSGRILACISSRPGQCGRSDGY 190
Score = 36.3 bits (80), Expect = 0.56
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKR 561
+LEGKELEFYL+KIKSK+
Sbjct: 191 ILEGKELEFYLKKIKSKK 208
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 132 bits (319), Expect = 6e-30
Identities = 60/81 (74%), Positives = 71/81 (87%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
+KKRKYE GRP+ NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++DV
Sbjct: 22 KKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDV 81
Query: 189 VYNASNNELVRTKTLVKNAIV 251
VYNAS+NELVRTKTLVKNAIV
Sbjct: 82 VYNASSNELVRTKTLVKNAIV 102
Score = 63.3 bits (147), Expect = 4e-09
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 433
+D TPF+ W+++HY L LG K +E +A S+K A A V L
Sbjct: 104 VDPTPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLL 143
Query: 434 EQFHTGRLLACVASRPGQCGRADGY 508
+QF +GRLLAC++SRPGQCGR DGY
Sbjct: 144 DQFSSGRLLACISSRPGQCGRCDGY 168
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 124 bits (300), Expect = 1e-27
Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
RKKRKYE GR NT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+D
Sbjct: 22 RKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILD 81
Query: 186 VVYNASNNELVRTKTLVKNAIV 251
VVYNASNNELVRT+TLVK+AIV
Sbjct: 82 VVYNASNNELVRTQTLVKSAIV 103
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRL 409
+DA PF+QWY +HY + +GRKK A+ E E A K+S RK R+
Sbjct: 105 VDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEG 164
Query: 410 AKVEGALEEQFHTGRLLACVASRPGQCGRADGY 508
++ +EEQF +GRLLAC++SRPGQCGRADGY
Sbjct: 165 RTLDPHIEEQFGSGRLLACISSRPGQCGRADGY 197
Score = 33.1 bits (72), Expect = 5.2
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKRAK 567
+LEGKELEFY++K++ K+ K
Sbjct: 198 ILEGKELEFYMKKLQRKKGK 217
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 113 bits (272), Expect = 3e-24
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
RK+ K E GR NTRLG +R+ VR+RGGN K RALRLDTGNF+W SE + R++DV
Sbjct: 22 RKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDV 81
Query: 189 VYNASNNELVRTKTLVKNAIV 251
VYNA++NELVRTKTLVKN IV
Sbjct: 82 VYNATSNELVRTKTLVKNCIV 102
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Frame = +2
Query: 236 QECNCCIDATPFRQWYESHYTLPLGR-KKGAKLTEAEE--------AIINK----KRSQK 376
+ C +DA PF++WY HY + L KK K A E A +K K S K
Sbjct: 98 KNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPK 157
Query: 377 TARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADG 505
R++ R+R +VE A+ +Q GR+LA + SRPGQ GRADG
Sbjct: 158 LQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADG 200
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 111 bits (266), Expect = 2e-23
Identities = 53/84 (63%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 179
P+++++ YE GR NT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI
Sbjct: 117 PLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRI 176
Query: 180 IDVVYNASNNELVRTKTLVKNAIV 251
+DVVY A+NNELVRT+TLVK+AIV
Sbjct: 177 LDVVYIATNNELVRTQTLVKSAIV 200
Score = 39.5 bits (88), Expect = 0.060
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGRKKGAKLTEAEE 346
+DA PF+QWY +HY + +GRKK + + ++
Sbjct: 202 VDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 99.5 bits (237), Expect = 5e-20
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
++KK+K GR NTRLG R+H VR R G K RALRL+ GNFSW S+ T+ T+I++
Sbjct: 21 MQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKGTKILN 80
Query: 186 VVYNASNNELVRTKTLVKNAIV 251
VVYNAS+N+ VRT TLVK AI+
Sbjct: 81 VVYNASDNDFVRTNTLVKGAII 102
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 326 KLTEAEEAIIN-KKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRAD 502
++ E + A++N K QK K L + K + AL E F +GR+LAC++SRPGQ G +
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVE 216
Query: 503 GY 508
GY
Sbjct: 217 GY 218
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 87.8 bits (208), Expect = 2e-16
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Frame = +3
Query: 12 KKRKYEFGRPTENTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECST 164
KKRKY GR NT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 165 RKTRIIDVVYNASNNELVRTKTLVKNAIV 251
K RI+ VVYN+++NELVRT TLVK +V
Sbjct: 83 HKARILQVVYNSTSNELVRTNTLVKGCVV 111
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 87.0 bits (206), Expect = 3e-16
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
RKKR +E GR NTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 22 RKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 487
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 488 CGRADGY 508
GR DGY
Sbjct: 119 SGRVDGY 125
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 9/94 (9%)
Frame = +2
Query: 254 IDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYLARQRL- 409
I PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+ RQ L
Sbjct: 7 IGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFETRQALP 66
Query: 410 -AKVEGALEEQFHTGRLLACVASRPGQCGRADGY 508
A VE +L+E+F TGRLLAC++S+PGQ GRADGY
Sbjct: 67 QANVEESLKEEFVTGRLLACISSKPGQVGRADGY 100
Score = 33.1 bits (72), Expect = 5.2
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKRAK 567
L EGKELEF+ +K+K+K+AK
Sbjct: 101 LFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
RKKR G +T++G +++ VR RGGN KY+ALRLD G+F + + R +++ V
Sbjct: 22 RKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQV 81
Query: 189 VYNASNNELVRTKTLVKNAIV 251
VY+ S+NELVRT TL K+++V
Sbjct: 82 VYHPSSNELVRTNTLTKSSVV 102
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/81 (49%), Positives = 52/81 (64%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
RKKR + GR NT++G + + +R RGG K RAL L GNFS+ S T K +I+ V
Sbjct: 22 RKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSV 81
Query: 189 VYNASNNELVRTKTLVKNAIV 251
+N S+NELVRT TL K +IV
Sbjct: 82 AFNESSNELVRTNTLTKGSIV 102
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 428 LEEQFHTGRLLACVASRPGQCGRADGY 508
L +Q +G++LA + SRPGQ GRADGY
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGY 161
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 59.3 bits (137), Expect = 7e-08
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = +2
Query: 311 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 490
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 491 GRADGY 508
GRADGY
Sbjct: 124 GRADGY 129
Score = 38.3 bits (85), Expect = 0.14
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 508 LLEGKELEFYLRKIKSKRAK 567
+LEGKELEFYLRKIK+K+ K
Sbjct: 130 ILEGKELEFYLRKIKAKKGK 149
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +3
Query: 15 KRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 194
K++ E GR T +G +R VR+ GGN K RALRL+ S + T+KT+I V
Sbjct: 22 KKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEA 81
Query: 195 NASNNELVRTKTLVKNAIV 251
N+++ VR K L K AI+
Sbjct: 82 NSADPNYVRRKLLTKGAII 100
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
P KR+YE GR TRLG + + +RS GGN+K+ LR D N + +TRK +I
Sbjct: 19 PNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVKIN 78
Query: 183 DVVYNASNNELVRTKTLVKNAIV 251
V N+++ V+ + + ++
Sbjct: 79 TVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 56.0 bits (129), Expect = 6e-07
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 IRKKRKYEFGRPTENTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
I KK+ + G NT L I R RGGN K++A+ L G+F W + ++ ++I+
Sbjct: 14 ISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSKNSKIL 73
Query: 183 DVVYNASNNELVRTKTLVKNAIV 251
V+YN +N +LV+ + L K I+
Sbjct: 74 SVLYNQANLKLVQKRNLSKGTII 96
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
RKKR++E GR T+LG + V R+ GGNTK +T N SE +K +II
Sbjct: 21 RKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKIIT 80
Query: 186 VVYNASNNELVRTKTLVKNAIV 251
V N +N+ V+ + K ++
Sbjct: 81 VKANPANSHYVQRNIINKGTVI 102
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
RKKRK E GR NTR+ Q + +R+ GGN K R N + RK RII
Sbjct: 21 RKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSGKGRKVRIIR 79
Query: 186 VVYNASNNELVRTKTLVKNAIV 251
V+ N +N + R + K AI+
Sbjct: 80 VLENPANRQFARRNIITKGAII 101
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +2
Query: 275 QWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGR 454
Q Y HY L +G KK A T ++ +++ RK RQ+ K++ +EEQF +GR
Sbjct: 45 QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKLEKRQQDHKLDPHIEEQFGSGR 100
Query: 455 LLACVASRPG 484
LLA ++S PG
Sbjct: 101 LLAAISSYPG 110
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
R KRKYE G P T L + I R+ GGN K R T N + + +K +I++
Sbjct: 21 RDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAKKVKILE 80
Query: 186 VVYNASNNELVRTKTLVKNA 245
++ +N EL R +++ A
Sbjct: 81 ILETPANKELARRGIIIRGA 100
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +3
Query: 9 RKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 188
+ KR EFGR TR+G + + +RG TK RA N + S++ ++ V
Sbjct: 21 KNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTV 80
Query: 189 VYNASNNELVRTKTLVKNAIV 251
+ N +N+ VR + K AIV
Sbjct: 81 LENGANSHFVRRNIITKGAIV 101
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 43.2 bits (97), Expect = 0.005
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSECSTRKTR 176
P RKKRK+E G P T +G +R + R GGN K + L+ T N + + R
Sbjct: 19 PHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGEVKCVR 77
Query: 177 IIDVVYNASNNELVRTKTLVKNAIV 251
I +VV N ++ R + K AI+
Sbjct: 78 IEEVVKNPASQYYERHGVITKGAII 102
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 42.7 bits (96), Expect = 0.006
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 15 KRKYEFGRPTENTRLG---PQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIID 185
KRKY GRP T L + VR+RGG+ K +A ++ S RK RI+
Sbjct: 24 KRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNPKTGEARKARILR 83
Query: 186 VVYNASNNELVRTKTLVKNAIV 251
+V ++ E R +VK A++
Sbjct: 84 IVETPAHREYARRGIIVKGAVI 105
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 41.1 bits (92), Expect = 0.020
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 3 PIRKKRKYEFGRPTENTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRII 182
P+R +RKYE R G Q + + RG TK +D N + +K++I+
Sbjct: 20 PLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGAKVKKSKIV 78
Query: 183 DVVYNASNNELVRTKTLVKNAIV 251
V+ N +NN+ R + + A++
Sbjct: 79 KVLENPTNNDYRRRGVITRGAVL 101
>UniRef50_UPI0000ECA0AF Cluster: UPI0000ECA0AF related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA0AF UniRef100 entry -
Gallus gallus
Length = 91
Score = 33.9 bits (74), Expect = 3.0
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 524 SLPSKSNHRRDHTDLGDSPRKPANAPCGIALLEHPQP 414
S PS+ RR LG P PA PCG +L HP P
Sbjct: 39 SSPSRRTWRRSVVRLGPEPSAPAACPCGTSL--HPAP 73
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 3.0
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 311 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 481
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 5.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 332 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 442
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 33.1 bits (72), Expect = 5.2
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 4 PYARRGSMSSGVPLKTPGSVLS 69
PYA + S S+G+PL TPGSVLS
Sbjct: 608 PYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 5.2
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 281 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 436
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_A7EWX7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 911
Score = 32.7 bits (71), Expect = 6.9
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 46 KTPGSVLSVSTPFVPVVEILSTVRCVWTPVTSL--GDRNVQLAKPVSLMLCIMHLTMNWC 219
K P LSV+ P PV++I S+ R + PVTS+ R V L KP +L + L +
Sbjct: 630 KGPPMALSVTQPLSPVMDI-SSPRRIPIPVTSMETSHRPVALNKPSTLDIGSRSLGRSSI 688
Query: 220 VQRPLSRMQLLYRCNS 267
+RP ++ R +S
Sbjct: 689 KKRPSKELRSTRRVSS 704
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 260 ATPFRQWYESHYTLPLGRKKGAKLTEAE 343
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 9.1
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 317 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 424
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 9.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 214 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 125
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,856,288
Number of Sequences: 1657284
Number of extensions: 11365321
Number of successful extensions: 35945
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35925
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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