Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40482
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 142 6e-33
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 134 9e-31
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 111 1e-23
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 85 1e-15
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 85 1e-15
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 84 2e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 80 3e-14
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 76 6e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 73 4e-12
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 65 1e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 61 2e-08
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 4e-06
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 48 2e-04
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 46 4e-04
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 46 4e-04
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 45 0.001
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 44 0.003
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 43 0.004
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 41 0.015
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 41 0.020
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 40 0.027
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 40 0.047
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 39 0.062
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 39 0.082
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 38 0.19
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.19
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 37 0.25
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 37 0.25
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 37 0.33
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 36 0.44
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 36 0.58
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 36 0.58
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 35 1.0
UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma cr... 35 1.3
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 35 1.3
UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome sh... 34 1.8
UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; cor... 34 1.8
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 1.8
UniRef50_Q4QE75 Cluster: Putative uncharacterized protein; n=3; ... 33 3.1
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 33 4.1
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 33 4.1
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 5.4
UniRef50_Q9Z753 Cluster: Putative uncharacterized protein; n=4; ... 32 7.1
UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep: ... 32 7.1
UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3; ... 32 7.1
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 32 7.1
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 32 7.1
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 32 7.1
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.4
UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 32 9.4
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 142 bits (343), Expect = 6e-33
Identities = 62/81 (76%), Positives = 77/81 (95%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK+TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
VDIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 118 bits (285), Expect = 6e-26
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQ+YVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 134 bits (325), Expect = 9e-31
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 180
A +E IQ+VQV GRK+TATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 181 KFSMVDIRVTVKGGGHVAQVYAIRQ 255
+F+ VDIR+ VKGGG+VAQ+YAIRQ
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQ 88
Score = 119 bits (286), Expect = 5e-26
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AISKAL+A+YQ+YVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 111 bits (266), Expect = 1e-23
Identities = 48/80 (60%), Positives = 67/80 (83%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 195
+ +VQ FG+K++ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 196 DIRVTVKGGGHVAQVYAIRQ 255
DIRV V GGGHV+QVYAIRQ
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQ 83
Score = 89.4 bits (212), Expect = 4e-17
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K L+A++Q+YVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+YQ+YVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 154 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQ 255
EP+L++G +KF+ VDIRV V GGGH +QVYAIRQ
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQ 95
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/102 (40%), Positives = 61/102 (59%)
Frame = +1
Query: 25 VQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 204
V G+K+ + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F +D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 205 VTVKGGGHVAQVYAIRQLFRRL*SPSTRDM*TKPQRRKSKTS 330
+ V GGGHV+Q+YA+RQ R S +D + + R S
Sbjct: 85 IKVAGGGHVSQIYAVRQAISRGVLASVKDEAARSELRAKLVS 126
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 102 AISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 85.0 bits (201), Expect = 1e-15
Identities = 51/145 (35%), Positives = 68/145 (46%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 DIRVTVKGGGHVAQVYAIRQLFRRL*SPSTRDM*TKPQRRKSKTS*FNTIGVCWWLTXXX 375
DI V VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 376 XXXXXXXXXXXXXDTRNLTVKPSTK 450
TRN + KP K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+Y +Y D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 140 AIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
Score = 78.2 bits (184), Expect = 1e-13
Identities = 30/56 (53%), Positives = 49/56 (87%)
Frame = +1
Query: 22 AVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 189
+V FG+K+TATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 187 SMVDIRVTVKGGGHVAQVYAIRQ 255
S VDIR+ V GGG +Q+YAIRQ
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQ 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 255 AISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKR-GHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
+++V G+K+ A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 193 VDIRVTVKGGGHVAQVYAIRQLFRR 267
+ +T K GG V++VYA+R F +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +3
Query: 177 GKILYGRHQSDS--QGWWSCSTSLRYQTAISKALIAFYQRYVDEASKKEIKDILVQYDRS 350
G Y R + D G S + + AI+K LIAF+Q+Y +E K +KD + YD+
Sbjct: 62 GSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKF 121
Query: 351 LLVADPRRCEPKKFGGPGARARYQKSYR 434
LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 122 LLIADPRRCEPKKWGRHSARTRFTKSYR 149
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 192
++ VQ FG+K+TA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 193 VDIRVTVKGGGHVAQVYAIRQ 255
+ I V V GGG V+Q YA RQ
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQ 89
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 75.8 bits (178), Expect = 6e-13
Identities = 34/93 (36%), Positives = 59/93 (63%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 195
++ +Q G+++TA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 196 DIRVTVKGGGHVAQVYAIRQLFRRL*SPSTRDM 294
DI V V+GGG + Q A R R T DM
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIARALVEWTGDM 93
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 267 ALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 434
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 72.9 bits (171), Expect = 4e-12
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +1
Query: 25 VQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIR 204
+Q FG+K+ A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 205 VTVKGGGHVAQVYAIRQ 255
+ KGGG V+Q+YAIRQ
Sbjct: 63 IFSKGGGKVSQIYAIRQ 79
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +3
Query: 210 SQGWWSCSTSLRYQTAISKALIAFYQRYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 389
S+G S + +ISK L+ +Y +Y+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 390 FGGPGARARYQKSYR 434
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 64.9 bits (151), Expect = 1e-09
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 189
P+Q+ QVFG K+ A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 190 MVDIRVTVKGGGHVAQVYAI 249
V I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 216
G+++ A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 217 GGGHVAQVYAIRQLFRR 267
GGG + Q A+R R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +3
Query: 288 RYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
R +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 252 TAISKALIAFYQRY-------VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 410
T IS+ALI + + + + ++++++ + +D+ L+ D RR EPKKFGGPGAR
Sbjct: 82 TGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGAR 141
Query: 411 ARYQKSYR 434
R QKSYR
Sbjct: 142 RRKQKSYR 149
Score = 41.5 bits (93), Expect = 0.012
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 34 FGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
F ++ A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 214 KGGGHVAQVYA 246
KGGG + Q A
Sbjct: 69 KGGGFMGQAGA 79
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 47.6 bits (108), Expect = 2e-04
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVDIRVT 210
G+++ A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 211 VKGGGHVAQVYAIR 252
V GGG AQ AI+
Sbjct: 69 VLGGGFAAQADAIK 82
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 46.4 bits (105), Expect = 4e-04
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++T+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 214 KGGGHVAQVYAIR 252
KGGG Q AIR
Sbjct: 66 KGGGINGQAGAIR 78
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 46.4 bits (105), Expect = 4e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 16 IQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLL-GKEKFS 189
++ + GR++T+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 190 MVDIRVTVKGGGHVAQVYAIRQLFRR 267
DIR V GGG Q A+R R
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIAR 89
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++T+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEKD--FDITVTV 68
Query: 214 KGGGHVAQVYAIR 252
KGGG Q A R
Sbjct: 69 KGGGFTGQAGATR 81
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 43.6 bits (98), Expect = 0.003
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 25 VQVFGRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVD 198
+ GR++TA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 199 IRVTVKGGGHVAQVYAI 249
+ V GGG +Q AI
Sbjct: 65 FYIKVSGGGINSQAEAI 81
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 7 REPIQAVQVFGRKRTATAVAYCKRGHGMLRV 99
R P VQ FGRK+TA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++T++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 214 KGGGHVAQVYAIR 252
+GGG Q AIR
Sbjct: 71 QGGGDSGQAGAIR 83
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 41.1 bits (92), Expect = 0.015
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++TA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 214 KGGGHVAQVYAI 249
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +1
Query: 13 PIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 183
P + + GR++T+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 184 FSMVDIRVTVKGGGHVAQVYAIRQLFRR 267
+ D+ + V GGG QV AIR R
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 40.3 bits (90), Expect = 0.027
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSMVDIRVT 210
GR++ +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 211 VKGGGHVAQVYAIR 252
V GGG Q AIR
Sbjct: 67 VSGGGTTGQAGAIR 80
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 39.5 bits (88), Expect = 0.047
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++ A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 214 KGGGHVAQVYAIRQLFRR 267
GGG Q A R R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 39.1 bits (87), Expect = 0.062
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +1
Query: 37 GRKRTATAVAYC--KRGHGMLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSMVDIR 204
GR++++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 205 VTVKGGGHVAQVYAIR 252
V VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 38.7 bits (86), Expect = 0.082
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++ + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 214 KGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 68 DGGGFTGQAGAIR 80
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.5 bits (83), Expect = 0.19
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 REPIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 183
+ IQ GR++ A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 184 FSMVDIRVTVKGGGHVAQVYAIR 252
+ D+ + V GGG QV A R
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATR 83
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 37.5 bits (83), Expect = 0.19
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVDIRV 207
GR++T+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 208 TVKGGGHVAQVYAIR 252
VKGGG V QV AI+
Sbjct: 77 KVKGGGLVGQVNAIK 91
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 37.1 bits (82), Expect = 0.25
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++ + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 214 KGGGHVAQVYAI 249
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 37.1 bits (82), Expect = 0.25
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 213
G+++ A A + K G G + VN + R +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 214 KGGGHVAQVYAIR 252
GGG Q A+R
Sbjct: 98 VGGGLSGQAGAVR 110
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 36.7 bits (81), Expect = 0.33
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
G+++TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 36.3 bits (80), Expect = 0.44
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 216
G+++T++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 217 GGGHVAQVYAI 249
GGG Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 35.9 bits (79), Expect = 0.58
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 213
GR++++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 214 KGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 74 YGGGISGQSGAIR 86
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 35.9 bits (79), Expect = 0.58
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSMVDIRVT 210
GR+++A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 211 VKGGGHVAQVYAIR 252
+GGG Q ++R
Sbjct: 75 AEGGGLTGQADSVR 88
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 35.1 bits (77), Expect = 1.0
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVDIRVTV 213
G+++ A A + K G G + VN + R +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 214 KGGGHVAQVYAIR 252
GGG Q A+R
Sbjct: 98 VGGGLSGQAGAVR 110
>UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma
cruzi|Rep: Amastin, putative - Trypanosoma cruzi
Length = 194
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 88 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQLFR 264
+L + G PLD PR + L +P + L K + G + + YA+ +LFR
Sbjct: 18 LLMLTGTPLDQFRPRTNPFFLTDPCVTLWGGKMHCSSTEYVISGNDVIHECYAVLELFR 76
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 34.7 bits (76), Expect = 1.3
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 EPIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 186
EP Q GR++ A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 187 SMVDIRVTVKGGGHVAQVYAIR 252
D+ + GGG Q A+R
Sbjct: 101 GRYDVIARISGGGVSGQAGALR 122
>UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 13
SCAF7203, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1946
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 168 ARQGKILYGRHQSDSQGWWSCSTSLRYQTAISKALIAFYQRYVDEASKKEIKDILVQYDR 347
A++ K +GR ++ W C L+ A +A F+Q V+ + E +++L +R
Sbjct: 1211 AQRSKRQWGRLETRVAFWKRCHQRLKGDGADPEAAFGFFQAQVEPGGRSEAEELLDVQER 1270
Query: 348 SLLV 359
SLL+
Sbjct: 1271 SLLL 1274
>UniRef50_Q9SMU5 Cluster: 30S ribosomal protein S9-like; n=6; core
eudicotyledons|Rep: 30S ribosomal protein S9-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 34.3 bits (75), Expect = 1.8
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 216
GR++ + A + + G G +VN + D+ P +L ++ L + DI+ TVK
Sbjct: 23 GRRKCSIARVWIQPGEGKFQVNEKEFDVYFP-MLDHRAALLRPLAETKTLGRWDIKCTVK 81
Query: 217 GGGHVAQVYAIRQLFRRL*SPSTRDM*T 300
GGG + F R P DM T
Sbjct: 82 GGGTTGKTSPQSLRFLRRLVPKFSDMRT 109
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 168
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q4QE75 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 630
Score = 33.5 bits (73), Expect = 3.1
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 126 AQTAAVQTSGTYPFARQGKILYGRHQSDSQGWWSCSTSLRYQTAISKALIAFYQRYVDEA 305
A+ A++ +GT + +L + G+ S SL +TA + +A+Y R+
Sbjct: 99 AERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQRV 158
Query: 306 SKKEIKDILVQYD 344
KE+ +++ D
Sbjct: 159 GGKEVPFVIMTSD 171
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSMVDIRVTV 213
G+++ ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 214 KGGGHVAQVYAI 249
+GGG Q AI
Sbjct: 159 RGGGVTGQAEAI 170
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 33.1 bits (72), Expect = 4.1
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGR-PLDLVEPRLLQYKL-QEPILLLGKEKFSMVDIRVT 210
GR+++A A G G L +NGR D ++ + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 211 VKGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 74 ATGGGLTGQADAIR 87
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 110 HWTWLSPDC--CSTNFRNLSFCSARKNSLWSTSE*QSRV 220
H T L DC C N LS C R +LW+TS S++
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTSAVLSKI 220
>UniRef50_Q9Z753 Cluster: Putative uncharacterized protein; n=4;
Chlamydophila|Rep: Putative uncharacterized protein -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 389
Score = 32.3 bits (70), Expect = 7.1
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 144 QTSGTYPFARQGKILYGRHQSD-SQGWWSCSTSLRYQTAISKALIAFYQRY-VDEASKKE 317
QTSGT FA +++ R+ ++ SQ +++++ + A++ + + +A KK+
Sbjct: 194 QTSGTANFAYGYEMILSRYNNEVSQCRLDIASTVKAKAALANMSASVKANVSLTDAQKKQ 253
Query: 318 IKDILVQYDRSL 353
I+DI+ Y +SL
Sbjct: 254 IEDIIASYTKSL 265
>UniRef50_Q50021 Cluster: U2266c; n=1; Mycobacterium leprae|Rep:
U2266c - Mycobacterium leprae
Length = 146
Score = 32.3 bits (70), Expect = 7.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 406 APGPPNFLGSQRRGSATSKLLSY*TRMSLISFFEASSTYLW 284
A GP N + S R G T+ LLS T ++F TY+W
Sbjct: 101 ALGPQNCIHSSRTGQTTAHLLSEHTETCCLTFVPIRWTYVW 141
>UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 524
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 369 RRCEPKKFGGPGARARYQKSYR*AFNETIGWYRRGGLLSLRY 494
R C P+ G R R ++ A+N + W+ R GLL L++
Sbjct: 46 RSCFPRPISTLGRRRRIRRDEGKAYNREMSWFSRFGLLRLKH 87
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 32.3 bits (70), Expect = 7.1
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +1
Query: 40 RKRTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 219
RK V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 220 GGHVAQVYAIR 252
GG Q AIR
Sbjct: 334 GGPSGQAGAIR 344
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 32.3 bits (70), Expect = 7.1
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPSK*LSDSVNLCYMTTTLDCHSDVDHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E K L D + LC + ++HR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 32.3 bits (70), Expect = 7.1
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 37 GRKRTATAVAYCKRGHGMLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSMVDI 201
GR++TA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 202 RVTVKGGGHVAQVYAIR 252
+ V GGG Q A+R
Sbjct: 68 VIRVNGGGLSGQSGAVR 84
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 345 RSLLVADPRRCEPKKFGGPGARARY 419
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A4AKU1 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 492
Score = 31.9 bits (69), Expect = 9.4
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 40 RKRTATAVAYCKRGHGMLRV-NGRPLDLVEPRLLQYKLQEP 159
R TAT+V +RG G RV +G P V R L Y L++P
Sbjct: 229 RPATATSVGATRRGLGWFRVFSGTPTGAVAARALTYWLRDP 269
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 31.9 bits (69), Expect = 9.4
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 AVQVFGRKRTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVD 198
A + GR++++ A +G G +N R + ++ + +P L + + D
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLT--QTNNTFD 68
Query: 199 IRVTVKGGGHVAQVYAIR 252
IRVTV+GGG Q AIR
Sbjct: 69 IRVTVRGGGLAGQAGAIR 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,276,620
Number of Sequences: 1657284
Number of extensions: 11004195
Number of successful extensions: 29675
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 28886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29657
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -