Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40481
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p pro...   132   4e-31
AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.    132   4e-31
AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protei...   132   4e-31
AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB...   132   4e-31
AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA...   132   4e-31
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    30   3.0  
BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p pro...    29   9.2  
AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-P...    29   9.2  

>BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p
           protein.
          Length = 347

 Score =  132 bits (320), Expect = 4e-31
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = +2

Query: 278 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 457
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+DNWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 458 YQGRFLHSSVTLGALGLP*G 517
           YQGRFLH +VTLGALGLP G
Sbjct: 288 YQGRFLHCNVTLGALGLPLG 307



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 511 LGRTTVMHLVPREHLPEPNSHGQ 579
           LG+TTVMHLVPR++LPEPNS  Q
Sbjct: 306 LGKTTVMHLVPRDNLPEPNSQDQ 328


>AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.
          Length = 347

 Score =  132 bits (320), Expect = 4e-31
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = +2

Query: 278 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 457
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+DNWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 458 YQGRFLHSSVTLGALGLP*G 517
           YQGRFLH +VTLGALGLP G
Sbjct: 288 YQGRFLHCNVTLGALGLPLG 307



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 511 LGRTTVMHLVPREHLPEPNSHGQ 579
           LG+TTVMHLVPR++LPEPNS  Q
Sbjct: 306 LGKTTVMHLVPRDNLPEPNSQDQ 328


>AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protein
           protein.
          Length = 347

 Score =  132 bits (320), Expect = 4e-31
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = +2

Query: 278 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 457
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+DNWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 458 YQGRFLHSSVTLGALGLP*G 517
           YQGRFLH +VTLGALGLP G
Sbjct: 288 YQGRFLHCNVTLGALGLPLG 307



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 511 LGRTTVMHLVPREHLPEPNSHGQ 579
           LG+TTVMHLVPR++LPEPNS  Q
Sbjct: 306 LGKTTVMHLVPRDNLPEPNSQDQ 328


>AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB,
           isoform B protein.
          Length = 347

 Score =  132 bits (320), Expect = 4e-31
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = +2

Query: 278 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 457
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+DNWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 458 YQGRFLHSSVTLGALGLP*G 517
           YQGRFLH +VTLGALGLP G
Sbjct: 288 YQGRFLHCNVTLGALGLPLG 307



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 511 LGRTTVMHLVPREHLPEPNSHGQ 579
           LG+TTVMHLVPR++LPEPNS  Q
Sbjct: 306 LGKTTVMHLVPRDNLPEPNSQDQ 328


>AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA,
           isoform A protein.
          Length = 347

 Score =  132 bits (320), Expect = 4e-31
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = +2

Query: 278 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRAEILRLI 457
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+DNWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 458 YQGRFLHSSVTLGALGLP*G 517
           YQGRFLH +VTLGALGLP G
Sbjct: 288 YQGRFLHCNVTLGALGLPLG 307



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 511 LGRTTVMHLVPREHLPEPNSHGQ 579
           LG+TTVMHLVPR++LPEPNS  Q
Sbjct: 306 LGKTTVMHLVPRDNLPEPNSQDQ 328


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
           protein.
          Length = 2938

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 436 RRDPATDLPGSLPAQLSDSGRSRPALGRTTVMHLVPREHLPEPNSHGQ 579
           R+ P    P  +  Q +    S+    +    HL+P++H P P  H Q
Sbjct: 274 RQHPHLAHPSQVQPQHTPQSHSQQQQSQHQQQHLMPQQHRPSPQQHSQ 321


>BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p protein.
          Length = 1186

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 445  PATDLPGSLPAQLSDSGRSRPALGRTTVMHLVPREHLPEPNS 570
            PA  L  +L      SG + PA+G+ T+ HL P +     NS
Sbjct: 947  PAGSLVANLELCARRSGSTLPAVGQLTLEHLAPLQAFVRANS 988


>AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-PA
            protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 445  PATDLPGSLPAQLSDSGRSRPALGRTTVMHLVPREHLPEPNS 570
            PA  L  +L      SG + PA+G+ T+ HL P +     NS
Sbjct: 947  PAGSLVANLELCARRSGSTLPAVGQLTLEHLAPLQAFVRANS 988


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,634,758
Number of Sequences: 53049
Number of extensions: 644633
Number of successful extensions: 2055
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)