Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40435
(389 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541... 166 6e-42
03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347... 165 1e-41
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 96 8e-21
05_03_0026 + 7466017-7466034,7466340-7466405,7466572-7466833,746... 51 3e-07
08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629... 31 0.25
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334... 30 0.57
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 1.7
05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880 28 2.3
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 27 4.0
01_01_0357 - 2816650-2817897 27 4.0
12_01_0421 - 3321590-3323692 27 7.0
09_02_0548 - 10467342-10468810,10470309-10471632 27 7.0
06_03_1146 - 28004896-28005554,28005664-28005844 27 7.0
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 27 7.0
02_05_1089 + 34019162-34019164,34019249-34019465,34019558-340197... 27 7.0
12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 26 9.2
04_03_1015 - 21734381-21736534 26 9.2
>01_06_1253 -
35753546-35753686,35753759-35753885,35753970-35754125,
35754761-35754853,35757132-35757265,35757339-35757465,
35757550-35757705,35758321-35758325
Length = 312
Score = 166 bits (403), Expect = 6e-42
Identities = 77/98 (78%), Positives = 84/98 (85%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFG
Sbjct: 46 AKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFG 105
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKRSDQDHR 294
RKGHAVGDIPGVRFKVVKV+ VSLL K K+ R
Sbjct: 106 RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPSRR 143
Score = 165 bits (400), Expect = 1e-41
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFG
Sbjct: 216 AKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFG 275
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
RKGHAVGDIPGVRFKVVKV+ VSLL K K+
Sbjct: 276 RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKK 307
>03_06_0466 -
34134138-34134278,34134355-34134481,34134558-34134713,
34135831-34135835
Length = 142
Score = 165 bits (400), Expect = 1e-41
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 180
AKGIVLEK+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEVL+AGFG
Sbjct: 46 AKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFG 105
Query: 181 RKGHAVGDIPGVRFKVVKVANVSLLLSTKRKR 276
RKGHAVGDIPGVRFKVVKV+ VSLL K K+
Sbjct: 106 RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKK 137
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 96.3 bits (229), Expect = 8e-21
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +1
Query: 1 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAG 174
AKGIVLEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN+ V G
Sbjct: 117 AKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENEVAYVDG 174
>05_03_0026 +
7466017-7466034,7466340-7466405,7466572-7466833,
7467254-7467294
Length = 128
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +1
Query: 154 DEVLVAGFGRKGHAVGDIPGVRFKVVK 234
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>08_02_0850 +
21862110-21862394,21862555-21862723,21862901-21862965,
21863632-21863905,21863998-21864145,21864237-21864346,
21864440-21864495,21864568-21864624,21864733-21864876,
21865304-21865351
Length = 451
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 269 LFVESRRDTLATFTTLK---RTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV 105
LFV S RD + TF L + PG S + P P P +++ SS QP G +AV
Sbjct: 195 LFVPSLRDYVKTFYPLGPVWQPPGSSTSKAPSAPCPPSASLFSSSAQSSQPKTGMSAV 252
>12_01_0425 +
3347804-3348284,3348544-3348759,3349038-3349588,
3349752-3349815,3349915-3349975,3350271-3350409,
3350561-3350677,3350794-3350971,3351218-3351828
Length = 805
Score = 30.3 bits (65), Expect = 0.57
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 188 PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLA-STPTFSRT 12
P P+T S S+ F P T+A + PF + + A STP F+ +
Sbjct: 277 PFAAKPSTGFGSTSTTLFNSPFNNTSAASSSPFASTTSIPLFTQTSSSLFANSTPGFASS 336
Query: 11 MPF 3
PF
Sbjct: 337 SPF 339
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 203 SPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFP 93
+PT P PNP ST SM F+ PS A FP
Sbjct: 3 TPTGNP-NPNPNPSTPFEVSMLFKPPSNAPAAAPIFP 38
>05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880
Length = 898
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 185 LRPNPATSTSSFSSMWFRQPSRGT 114
L P+ +T T +FS WFR PS+ T
Sbjct: 196 LPPDGSTVTIAFSERWFRIPSKWT 219
>07_03_1140 -
24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 142 IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLLSTK 267
+EE + V+ G+ H D+P R K VAN SLL +TK
Sbjct: 422 VEEPNAVITTYEGKHIH---DVPAARNKSHVVANASLLQNTK 460
>01_01_0357 - 2816650-2817897
Length = 415
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 202 HRRRDLYDRIPPLVLRRFLRCGLGNRHGG 116
H+ ++ DR+PPLVLR + G R G
Sbjct: 175 HQAQEHQDRVPPLVLRHAQQLGRARRVPG 203
>12_01_0421 - 3321590-3323692
Length = 700
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 321 TAGHLSQCTPMILVAPFSLCREQERHVGY 235
TAG++++CT M LVA + R +GY
Sbjct: 275 TAGYVTECTQMFLVARRNASDASLRALGY 303
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 26.6 bits (56), Expect = 7.0
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 118 PRDGCLN--HIEENDEVLVAGFGRKGHAVGDIPG--VRFKVVKVANVSLLLSTKRKRSDQ 285
PR C + + + E L G R+ ++ +PG R+++V + SLLL K+K+S+
Sbjct: 111 PRGCCSSVAFVPTSPEFLTTGRRRRRFSLDFLPGGGSRWEIVD-SRGSLLLLAKKKKSNW 169
Query: 286 DHRC 297
RC
Sbjct: 170 MRRC 173
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 215 TPGMSPTA*PLRPNPATSTSSFSS 144
TP SP+ P+ P PA +TS+ SS
Sbjct: 184 TPSPSPSVSPMAPAPAPTTSTPSS 207
>06_03_1130 -
27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 26.6 bits (56), Expect = 7.0
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = -1
Query: 344 TYKQRASRQQV-TYHNVHL*SWSLLFLFVESRRDTLATFTTLKRTPGMSPTA*PLRPNPA 168
TY+ R S + T N+ + SLL + VE +T+T++ G S + P
Sbjct: 210 TYRFRVSNVGIATSVNIRIQGHSLLLVEVEGSHTVQSTYTSIDVHLGQSYSFLVTADQPP 269
Query: 167 TSTSSFSSMWFRQPSRGTNAVTFF 96
S S F P T AV +
Sbjct: 270 QDYSIIVSTRFTNPVLTTTAVLHY 293
>02_05_1089 +
34019162-34019164,34019249-34019465,34019558-34019714,
34019935-34020071,34020387-34020490,34020593-34020688,
34020818-34020908,34021384-34021504,34021579-34021775,
34022605-34022705,34022778-34022833,34023689-34023778,
34023865-34023964,34024194-34024295,34024372-34024441,
34024696-34024850,34024944-34025068,34025126-34025144
Length = 646
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 190 DLYDRIPPLVLRRFLRCGLGNRHGGR 113
++Y + P LRR L GLG GG+
Sbjct: 57 EVYRAVGPRFLRRLLNTGLGKVEGGK 82
>12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044
Length = 578
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 91 NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGH-AVGDIPGVRF 222
N KK + R+G L+++ N+E + + F R G A+ D+ R+
Sbjct: 471 NTKKDVMVLQREGILDNLLSNEEEVASFFNRLGRCALVDVSNHRY 515
>04_03_1015 - 21734381-21736534
Length = 717
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 49 NSAIRKCVRVQLIKNGKKVTAFVPRDG 129
+SA+ C + L+ +GK++ A++ R+G
Sbjct: 492 SSALAACANIFLLNHGKQIHAYMIRNG 518
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,584,846
Number of Sequences: 37544
Number of extensions: 210790
Number of successful extensions: 582
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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