Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40429
(670 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 165 9e-40
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 153 4e-36
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 152 6e-36
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 136 5e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 133 4e-30
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 126 6e-28
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 110 3e-23
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 100 4e-20
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 93 7e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 89 1e-16
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 80 5e-14
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 80 5e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 77 5e-13
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 75 2e-12
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 74 3e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 8e-12
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 70 4e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 70 6e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 69 1e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 69 1e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 68 2e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 1e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 1e-09
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 64 3e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 63 5e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 62 9e-09
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 62 9e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 62 9e-09
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 62 1e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 60 6e-08
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 54 2e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 2e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 7e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 7e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 49 9e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 9e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 8e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.006
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.008
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 41 0.024
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.024
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.024
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 40 0.072
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.29
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.29
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.38
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.38
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.51
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.51
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 36 0.67
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.88
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.88
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.2
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.0
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.7
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 33 4.7
UniRef50_P41846 Cluster: WBSCR14 protein homolog; n=2; Caenorhab... 33 4.7
UniRef50_A6EXE2 Cluster: Serine/threonine kinase with two-compon... 33 6.2
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.2
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 33 8.2
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 8.2
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 33 8.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 165 bits (401), Expect = 9e-40
Identities = 82/106 (77%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG + + HT
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAP
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAP 208
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG+ DCYT
Sbjct: 209 VPKKLLMMAGIDDCYT 224
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 153 bits (371), Expect = 4e-36
Identities = 70/106 (66%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWGT + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFR 638
G +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+AP + F +
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ 188
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
++++KEWVPVTKLGRLV+ GKI +E IYL+SL K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 152 bits (369), Expect = 6e-36
Identities = 77/106 (72%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 394 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWG + + HT
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAP 590
G KIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 176 VPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
+PVTKLG L+ + KI LE IYLFSL K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 136 bits (329), Expect = 5e-31
Identities = 64/101 (63%), Positives = 81/101 (80%), Gaps = 2/101 (1%)
Frame = +1
Query: 232 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 408
EH+ +F IKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 409 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
LGVK KEVA +I+G++ILAKL+++PVRRGYWG++ E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 614
G K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVAS 197
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 158 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
+D+ WVP TKLGRLV++GKI LE I+LFSL K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 133 bits (321), Expect = 4e-30
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEV
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
Query: 436 ATAIRGAIILAKLSVLPVRRGYWGT 510
A AIR II+AKLSV+P+RRGYWGT
Sbjct: 122 AGAIRAGIIIAKLSVIPIRRGYWGT 146
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFR 638
G +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P ++ +
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQ 189
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
++K WVPVTKLGRLV+ GKI +E I+L SL K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 126 bits (303), Expect = 6e-28
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 484 PVRRGYWGTR 513
P+R+GYWG +
Sbjct: 108 PLRQGYWGNK 117
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G KIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAP
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAP 152
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG+ DCYT
Sbjct: 153 VPKKLLMMAGIDDCYT 168
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 110 bits (264), Expect = 3e-23
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 436 ATAIRGAIILAKLSVLPVRRGYW-GTRSESHTPS 534
A+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFF 635
GKPHTV CK +GKCG+ V++IPAPRGTGI+S + F
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIF 175
Score = 37.5 bits (83), Expect = 0.29
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 250
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 100 bits (239), Expect = 4e-20
Identities = 50/66 (75%), Positives = 52/66 (78%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 394 NGHIGL 411
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 92.7 bits (220), Expect = 7e-18
Identities = 43/59 (72%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Frame = +1
Query: 355 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWG + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G +I KPHTVP KVTG+CGSV VRLIPAPRGTG VSAP
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAP 148
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKI 220
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG+ DCYT
Sbjct: 149 VPKKLLMMAGIDDCYT 164
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 394 NGHIG 408
NG+ G
Sbjct: 62 NGYAG 66
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 482 YQFEEVTGVQDRKATHRPLQGHRQVWFCNSPADSCPSWYWN 604
++ + + G QDR+A HRPLQG R + C +W+
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWH 131
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.8 bits (188), Expect = 5e-14
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 411
E L IKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 412 GVKCSKEVATAIRGAIILAKLSVLPVRRGYWGTR-SESHT 528
G+ EVA I+ IIL KL ++PV RGY G++ S+ HT
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G K KPHTV CKVTG GSV++ LIPAPR T I SAP
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAP 186
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 79.8 bits (188), Expect = 5e-14
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
IKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Query: 436 ATAIRGAIILAKLSVL--PVRRGYWG--TRSESHTPSLARSPASVVL*QSG*FLPLVVLE 603
AI+ L + ++ G R +H+P + + Q G
Sbjct: 151 QGAIQELCNLNQCQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYS 210
Query: 604 LCLRHS*EASSDGWCTGLLHS 666
C H E ++GW LLHS
Sbjct: 211 -CSHHIQEGLTNGWYPRLLHS 230
Score = 49.2 bits (112), Expect = 9e-05
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKN----SRSLISSSARP*MMRF*RSCLY 331
++EWVP+TKLGRLV+ GKI LE+I+ FS+ K L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 332 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 499
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 500 TGVQDRKATHRPLQGHRQVWFCNSPADSCPSWYW 601
G QDR TH P+Q R+ S S YW
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYW 208
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = -2
Query: 507 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 328
TPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 31 TPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLD 90
Query: 327 RHDL*NLIIQGRAEEEINDLEFFD 256
HDL + ++Q A+EEI+DLE F+
Sbjct: 91 GHDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/89 (42%), Positives = 58/89 (65%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 411
E L I+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 412 GVKCSKEVATAIRGAIILAKLSVLPVRRG 498
+ KEVA+ IR AI AKL+++PV RG
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRG 99
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 516 GKPHT-VPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLR 626
G P T VP K+TG+ GS V L+PAP G G+V + + R
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGR 144
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = -2
Query: 507 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 328
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 327 RHDL*NLIIQGRAEEEINDLEFFD 256
R D+ N I+Q ++ +NDLEF D
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFLD 194
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/109 (38%), Positives = 59/109 (54%)
Frame = +1
Query: 154 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQ 333
QG + P K + + +L IKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 334 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 480
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/52 (73%), Positives = 39/52 (75%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPRGTGIVSAP 617
KVTG+CGSV VRLIPAPRGTGIVSAP
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAP 150
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG+ DCYT
Sbjct: 151 VPKKLLMMAGIDDCYT 166
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 262 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 441
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 442 AIRGAIILAKLSVLPVRRG 498
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 611
G PH++P G CGSV V L+PAPRG G+V+
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVA 163
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEA 91
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
A AI+ AI AKL+++ ++RG
Sbjct: 92 APAIKKAIDNAKLNIIEIKRG 112
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFR 638
GKPHT+P V GK GSV+V L PAP+G G+ ++ R
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +1
Query: 250 FTIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 417
+ IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Query: 418 KCSKEVATAIRGAIILAKLSVLPVRRG 498
KEV AIR AI AKL+++ ++RG
Sbjct: 101 GHGKEVGIAIRKAINYAKLNIIEIKRG 127
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 608
+PH+VP V GK GSV VRLIP PRG G+V
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLV 166
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 170 EWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
EW P TKLG +V+EG+I + I+ Q K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +1
Query: 247 FFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 426
+ +KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 427 KEVATAI 447
K+V TA+
Sbjct: 75 KKVGTAV 81
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI AK++++PVRRG
Sbjct: 100 RVAIQKAIRDAKMNIIPVRRG 120
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFRW 641
G+PH++P KV GK GSV V L+PAP+GTG+V L++ +
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTY 170
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 447
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 448 RGAIILAKLSVLPVRRGYW 504
+ A+ AKL++ +RRGYW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPF 620
GKP+T+ K +GK GSV V + PAP+GTGIV++ F
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKF 215
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQV 144
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI +AKL+++ V RG
Sbjct: 145 GGAIQKAIDVAKLNIIEVDRG 165
Score = 36.3 bits (80), Expect = 0.67
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRS 629
G +++ K GK GSVTV + PAP+G G+ +A +R+
Sbjct: 174 GGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRN 211
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 331 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3
Query: 510 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSF 632
++ + V KVT GSV V LIPAPRGTGIVSAP L F
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKF 92
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQV 93
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI+ AI +AKL+++ V RG
Sbjct: 94 GGAIQKAIDIAKLNIIDVSRG 114
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLR 626
G+PHTV + GK GSV V L PAPRG G+ +R
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVR 159
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+P TKLG LV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 540 KVTGKCGSVTVRLIPAPRGTGIVSAP 617
KVTG+CGSV VRL APRGTGIVSAP
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAP 150
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI A A L+V P++ G
Sbjct: 133 RIAIEKATNAAYLNVNPIKMG 153
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 525 HTVPCKVTGKCGSVTVRLIPAPRGTGIVS 611
H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVA 193
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
IKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKEL 74
Query: 436 ATAIRGAIIL 465
A+ IIL
Sbjct: 75 LIAVCRTIIL 84
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = +3
Query: 486 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
S ++ LG KIGK H V CKVTG CGSV V LIPA RGTGI SAP
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAP 44
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 62.5 bits (145), Expect = 9e-09
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 457 IILAKLSVLPVRRGYWGTR-SESHTPS 534
IIL + S+ G+ G + ++ HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFR 638
G KI KPHTV C+VT SV V I APRGT I+SAP + R
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLR 115
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 504 GYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
G K +PH VPC+VTG+CGS+ V LIPAPRGTG VSAP
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAP 184
Score = 59.7 bits (138), Expect = 6e-08
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 426
IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K S
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYS 127
Query: 427 KEVATAIRGAIILAKLSVLPVRRGYWGTRSESH 525
EVA IILAKLS++PV G R E H
Sbjct: 128 MEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP 298
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 435
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 436 ATAIRGAIILAKLSVLPVRRG 498
AI A A L+V P++ G
Sbjct: 114 RIAIEKANNQALLNVGPIKLG 134
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 525 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLR 626
H+VP KV GK GSV + ++PAPRG G+V+ +R
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIR 179
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 469 KLSVL--PVRRGY 501
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 259 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 438
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 439 TAI 447
TAI
Sbjct: 144 TAI 146
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 528 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 617
TV CKVTG+C SV + LIP R I+SAP
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTR--NIISAP 189
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 411
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 36.7 bits (81), Expect = 0.51
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 179 PVTKLGRLVREGKIDKLESIYLFSLQSK 262
PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
K + KEW+PVTKLGRLV++ KI LE IYLFSL K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 478 VLPV 489
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 295 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 475 SVLPVRR 495
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 486 SSKRLLGYKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRS 629
++ L+ K K ++ V G+ G+ V L+PAP GTGI++ +R+
Sbjct: 105 ANNNLIKVKQTKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRA 152
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 457 IILAKLSVLPV 489
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Frame = +1
Query: 250 FTIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQRTRFKAFVAIGD 390
+ I+E EI+D L P+L E +K + QK+T G +TR++ +GD
Sbjct: 33 YVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
Query: 391 NNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 498
+GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 92 KDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 516 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRSFFR 638
G PH++P +V GK GSV V L PAP+G GIV+ ++ FR
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESI 238
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 292 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 471
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 472 LSVLPV 489
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 49.2 bits (112), Expect = 9e-05
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 447
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 448 RGAIILAKLSVLPVRRGYWGTR-SESHT 528
+ AI L + + GY G + HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 FTSSKRLLGYKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSA 614
F++ G KIG PHT+PC VT + V V L APRGTG VSA
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSA 160
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 478 VLPVR 492
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 484 PV 489
+
Sbjct: 71 KI 72
Score = 33.1 bits (72), Expect = 6.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 611
K +T+P ++ GK G+ T+ + PA GTG+++
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIA 105
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 484 PV 489
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 283 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 462
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 463 LAKLSVLPV 489
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 484 --PVRRG 498
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 484 PV 489
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 484 PV 489
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 469 KLSVL--PVRRG 498
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 468
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 469 KLSVLPVRR 495
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 477
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 478 VLPVRRG 498
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 301 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 480
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 481 LPV 489
+ +
Sbjct: 91 VKI 93
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 519 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPFLRS 629
K HT+P +V GK S V L P+ GTGI++ +RS
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRS 132
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 484 PV 489
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 478 VLPV 489
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 484 PV 489
V
Sbjct: 104 RV 105
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 41.1 bits (92), Expect = 0.024
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 173 WVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
W PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.024
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 484 PV 489
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.024
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 471
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 39.5 bits (88), Expect = 0.072
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1
Query: 613 ADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILYP 503
A+ +PVP GAG+ T TEP P+TL G +CG L P
Sbjct: 41 AEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.29
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 328 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.29
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 478 VLPVRR 495
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 459 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 361
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.51
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 477
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 478 VLPV 489
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.51
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 483
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 484 PV 489
V
Sbjct: 151 RV 152
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 36.3 bits (80), Expect = 0.67
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 364 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGT 510
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W T
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLWHT 235
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 301 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 450
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.88
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 310 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 489
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 328 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 495
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 295 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 475 SVLPVRR 495
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 286 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 465
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 466 AKLSVL 483
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 283 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 447
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.7
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 295 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 474
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 475 SVLPVRR 495
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 33.5 bits (73), Expect = 4.7
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 617 IPKKLLQMAGVQDCYT 664
+PKKLL MAG+ DCYT
Sbjct: 13 VPKKLLMMAGIDDCYT 28
>UniRef50_P41846 Cluster: WBSCR14 protein homolog; n=2;
Caenorhabditis elegans|Rep: WBSCR14 protein homolog -
Caenorhabditis elegans
Length = 1009
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 661 VAVLYTSHLKKLLRNGADTIPVPRGAGISRTVTEPHLPVTLQGT 530
V++ + SH++++L N +P P + + T +P+LP LQ T
Sbjct: 475 VSLPHQSHVERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQST 518
>UniRef50_A6EXE2 Cluster: Serine/threonine kinase with two-component
sensor domain; n=1; Marinobacter algicola DG893|Rep:
Serine/threonine kinase with two-component sensor domain
- Marinobacter algicola DG893
Length = 1684
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3
Query: 581 NQPDCYRTTLAGDLARDGVWLSDLVPQ*PLRTGK 480
NQ DC+RT L G L +G + DLVP+ L G+
Sbjct: 393 NQLDCWRTELLGALGPNGALVIDLVPELALIIGE 426
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 310 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 456
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 32.7 bits (71), Expect = 8.2
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = -2
Query: 597 YHEGQESAGLLQNHTCR*PCKGRCVAFRSCTPVTSSNW*NRQLSKDNSASNGSGDFLAAL 418
++E + ++ NH CR +G + F + N N+++ SA+ +FL
Sbjct: 635 FNENKTMKKVVFNHWCR--FRGGILKFPK--DKQTPNTYNKEIGSLFSANGSIKNFLMWS 690
Query: 417 HTQTNMTV-VVANGNK---CLETCALSGTCLF-LYRHDL*NLIIQ 298
T T + ++++GNK C ET A+ TC F Y DL LI Q
Sbjct: 691 STTTQVIEEILSSGNKTITCFETSAIDNTCNFDKYLLDLNRLINQ 735
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 182 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 24
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -2
Query: 252 KENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 160
KE K + S + I P+ T PSLVTGTH F S
Sbjct: 23 KECKKISSMVVILPALTNLPSLVTGTHPFSS 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,036,157
Number of Sequences: 1657284
Number of extensions: 14275139
Number of successful extensions: 42987
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 40482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42830
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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