Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40420
         (644 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23D35 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_Q8IEQ5 Cluster: Putative uncharacterized protein MAL13P...    34   2.6  

>UniRef50_Q23D35 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1407

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = -3

Query: 216 NLYLMKVLNRIL*RRRLYSNQSVLTYQ*HFFLQMHRLPPLIIDDSNKDFN*FKEISSLN- 40
           NL+ +K L + + RR  +  Q  + Y+  +F       PLI D SN   + FKE+ S+N 
Sbjct: 626 NLFEIKKLMKNIYRREFFPEQDTINYK--YF------NPLIKDLSNSIEDYFKELLSINE 677

Query: 39  -AVFFMLNSESQKK 1
            AV  ++N ESQK+
Sbjct: 678 EAVIKIINHESQKQ 691


>UniRef50_Q8IEQ5 Cluster: Putative uncharacterized protein MAL13P1.29;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL13P1.29 - Plasmodium
            falciparum (isolate 3D7)
          Length = 1341

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 491  LCKNKVF*TYRNKIMQSKYGLCIMYILCICIFKYYIN 381
            L K  +F +  N+++Q K   CI+YIL + I+ ++IN
Sbjct: 974  LLKTNIFHSQNNQLLQMKGIFCILYILIVQIYIFFIN 1010


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,578,872
Number of Sequences: 1657284
Number of extensions: 7729028
Number of successful extensions: 12921
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12913
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)