Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40418
(606 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 149 5e-35
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 134 1e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 129 4e-29
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 120 3e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 110 3e-23
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 107 2e-22
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 107 3e-22
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 101 2e-20
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 91 1e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 91 2e-17
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 90 4e-17
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 88 2e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 77 4e-13
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 5e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 73 7e-12
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 71 3e-11
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 56 9e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 50 6e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 5e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 42 0.011
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.015
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 42 0.015
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 41 0.026
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 40 0.035
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.060
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 40 0.060
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.43
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.56
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 34 2.3
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 3.0
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 4.0
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 5.2
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 6.9
UniRef50_Q3WJB7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 32 9.2
UniRef50_Q4QAD5 Cluster: Putative uncharacterized protein; n=3; ... 32 9.2
UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 149 bits (361), Expect = 5e-35
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 433
FRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 434 GFTNKDSLSQRKTCYAQHTQVRAIRRK 514
GFT KDS+SQRKTCYAQH+Q++ IR K
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAK 170
Score = 117 bits (281), Expect = 2e-25
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +3
Query: 66 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 245
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 246 ERS 254
ERS
Sbjct: 81 ERS 83
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +1
Query: 487 HSGQSN-QKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
HS N + KM II R++T+++L+ VV KL+PDSIAKDIE
Sbjct: 161 HSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIE 201
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 134 bits (325), Expect = 1e-30
Identities = 61/90 (67%), Positives = 74/90 (82%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 433
FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 434 GFTNKDSLSQRKTCYAQHTQVRAIRRKCVK 523
GFT K + RKT YAQH QVR IR+K ++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 101 bits (243), Expect = 1e-20
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +3
Query: 66 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 245
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 246 ER 251
R
Sbjct: 81 FR 82
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 505 QKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
+KKM EI+TR+V ++L+EVVNKLIPDSI KDIE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIE 198
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 129 bits (312), Expect = 4e-29
Identities = 60/89 (67%), Positives = 70/89 (78%)
Frame = +2
Query: 248 KVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 427
+ +RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 428 CIGFTNKDSLSQRKTCYAQHTQVRAIRRK 514
CI FT K +KTCYAQ +Q+R IRRK
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 99 bits (238), Expect = 4e-20
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +3
Query: 72 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 242
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED 473
Score = 38.7 bits (86), Expect = 0.11
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 484 AHSGQSNQ--KKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
A S Q Q +KM EI+T T+ +L+E+V K IP+SI ++IE
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIE 593
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 120 bits (289), Expect = 3e-26
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = +2
Query: 248 KVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 427
+VFRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 428 CIGFTNKDSLSQRKTCYAQHTQVRAIRRKCVKSLHAT 538
I FT K ++KT YA+ ++V+AIR+K V L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 83.0 bits (196), Expect = 5e-15
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Frame = +3
Query: 69 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 236
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ D
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 75
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 110 bits (264), Expect = 3e-23
Identities = 51/98 (52%), Positives = 69/98 (70%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 433
FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 434 GFTNKDSLSQRKTCYAQHTQVRAIRRKCVKSLHATSLT 547
T + +KT YA +Q+RAIRRK + + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.4 bits (202), Expect = 9e-16
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +3
Query: 72 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 242
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED 78
Score = 36.7 bits (81), Expect = 0.43
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 505 QKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
++KM EII R+ + L+++ NKLIP+ I ++IE
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIE 198
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 107 bits (258), Expect = 2e-22
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = +2
Query: 251 VFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 430
+FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 431 IGFTNKDSLSQRKTCYAQHTQVRAIRRKCVK 523
I FT K Q+ YAQ T+++ +R + V+
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 35.5 bits (78), Expect = 0.98
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 511 KMCEIITRDVTNSELREVVNKLIPDSIAKD 600
++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 107 bits (256), Expect = 3e-22
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Frame = +2
Query: 248 KVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 427
K +RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 428 CIGFTNKDSL---SQRKTCYAQHTQVRAIRRK 514
+ FT K S S TCYA+ +QVRAIRRK
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRK 173
Score = 68.9 bits (161), Expect = 9e-11
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 69 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 242
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ +++
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSN 80
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 101 bits (241), Expect = 2e-20
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +2
Query: 263 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 442
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 443 NKDSLSQRKTCYAQHTQVRAIRR 511
++ S +KT YA+ Q++ IR+
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKIRK 168
Score = 75.8 bits (178), Expect = 8e-13
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 66 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 227
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 91.5 bits (217), Expect = 1e-17
Identities = 37/94 (39%), Positives = 60/94 (63%)
Frame = +2
Query: 248 KVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 427
+ +RK R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 428 CIGFTNKDSLSQRKTCYAQHTQVRAIRRKCVKSL 529
+ FT + Q + CYA+ V+ +R + K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 72 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 251
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 252 S 254
+
Sbjct: 83 A 83
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/90 (45%), Positives = 61/90 (67%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 433
+RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I
Sbjct: 80 WRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVI 139
Query: 434 GFTNKDSLSQRKTCYAQHTQVRAIRRKCVK 523
FT QRKT YAQ +Q++ IR+K V+
Sbjct: 140 AFTKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 65.7 bits (153), Expect = 8e-10
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +3
Query: 69 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 242
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD 76
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 89.8 bits (213), Expect = 4e-17
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +3
Query: 69 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 248
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 249 R 251
R
Sbjct: 82 R 82
Score = 35.9 bits (79), Expect = 0.74
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTD 337
FRKF+LI E VQG+ L NF M L+ D
Sbjct: 81 FRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +3
Query: 66 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 245
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 246 ER 251
R
Sbjct: 78 FR 79
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2
Query: 254 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 406
FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 505 QKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
+KKM EI+TR+V ++L+EVVNKLIPDSI KD+E
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVE 145
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 76.6 bits (180), Expect = 4e-13
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +2
Query: 251 VFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 430
V RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 431 IGF-TNKDSLSQRKTCYAQHTQVRAI 505
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = +3
Query: 84 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 236
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQND 62
Score = 35.5 bits (78), Expect = 0.98
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 496 QSNQKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
Q +Q + I D ++L+EV+NKL+PD++ KD+E
Sbjct: 145 QVHQIWLITIQIMDQRRTDLKEVLNKLVPDNVGKDVE 181
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +2
Query: 257 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 436
RKF ++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G
Sbjct: 34 RKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMG 93
Query: 437 FTNKDSLSQRKTCYAQHTQVRAIRR 511
T + +KTCY +H+ + IR+
Sbjct: 94 VTRRHPGYVKKTCYVKHSDEKKIRK 118
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 72.9 bits (171), Expect = 5e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 290 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 469
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 470 TCYAQHTQVRAIRRKCVKSL 529
YA + R +R +K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 72.5 bits (170), Expect = 7e-12
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +2
Query: 260 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 439
KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 440 TNKDSLSQRKTCYAQHTQVRAIRRKCVKSLH 532
T++ +RK C+ + +R +R ++LH
Sbjct: 143 TDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 57.6 bits (133), Expect = 2e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +3
Query: 72 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 227
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +2
Query: 311 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 490
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 491 QVRAIRRK 514
Q RA+RR+
Sbjct: 156 QKRALRRR 163
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 55.6 bits (128), Expect = 9e-07
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = -2
Query: 242 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 63
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 62 LLNTFFTALRQAFIFPDRH 6
LL++ F L +FPD H
Sbjct: 136 LLSSLF-PLGNPLVFPDDH 153
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 49.6 bits (113), Expect = 6e-05
Identities = 30/102 (29%), Positives = 55/102 (53%)
Frame = +2
Query: 260 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 439
K + V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 440 TNKDSLSQRKTCYAQHTQVRAIRRKCVKSLHATSLTLNSGRW 565
T + +K+ A+R+K +++L + L+SG++
Sbjct: 134 TTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +2
Query: 317 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 466
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 284 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 463
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 464 RKT 472
KT
Sbjct: 137 IKT 139
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 41.9 bits (94), Expect = 0.011
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +2
Query: 323 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 502
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 503 IRRKCVKSLHATS 541
IRR + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.015
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 66 IVDPFTRKDWYDVKAPSMFSKRQVGTT 146
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.5 bits (93), Expect = 0.015
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +2
Query: 182 GRIEGKSFRSFPG*STS*H*RGKVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 361
G++ G+ S G T + + FR+ E + G + +F G +LT D +R +VK+
Sbjct: 40 GKMIGRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKR 97
Query: 362 WQTLIEANIDVKTTDGYVLRVFCIGFTNK 448
+ I+AN+ V T DG+ +RV I T K
Sbjct: 98 RTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.24
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 69 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 236
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 40.7 bits (91), Expect = 0.026
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +2
Query: 167 NENCFGRIEGKSFRSFPG*STS*H*RGKVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 346
+E+ GRI + + F G T H V +FR ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 347 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 448
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 40.3 bits (90), Expect = 0.035
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = +2
Query: 284 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 463
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 464 RKTCYAQHTQVRAIRRKCVK 523
T A+ +Q RAIR++ K
Sbjct: 119 --TRRAKTSQQRAIRKEMFK 136
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.060
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFRKFRLIAEYVQGRNVLCNFHGMDLTT 334
P N+ N GRI S R T+ H + F++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTR 95
Query: 335 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 472
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 39.5 bits (88), Expect = 0.060
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 284 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 463
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT------V 129
Query: 464 RKTCYAQHTQVRAIRRKCV 520
R+ +Q +RAI R+ V
Sbjct: 130 RRCKTSQKRAIRAIMRQIV 148
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.43
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 287 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 442
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.56
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 284 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 463
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 464 RKT 472
+K+
Sbjct: 130 QKS 132
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 34.3 bits (75), Expect = 2.3
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 311 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 490
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 491 QVRAIRRK---CVKSL 529
++R I R+ C+K +
Sbjct: 157 RIRKINRESILCIKKM 172
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 33.9 bits (74), Expect = 3.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 323 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 469
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEK 132
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.5 bits (73), Expect = 4.0
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 248 KVFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 427
K + K R + V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 428 CIGFTNKDSLSQRK 469
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 5.2
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 311 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 469
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 32.7 bits (71), Expect = 6.9
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -1
Query: 576 QLVHHLPEFRVSDVACNDFTHFLLIALT*VCWA*HVLRWLKESLLVKPMQKT 421
+L+H + S AC D F + LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 6.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 321 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 446
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q3WJB7 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 283
Score = 32.3 bits (70), Expect = 9.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 430 HWFHQ*GLLEPTQDVLRPAHSGQSNQKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 606
HWF Q G P D LR + + + ++C+ TR + ++ +L+P DIE
Sbjct: 172 HWFRQPG--GPDYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIE 228
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.3 bits (70), Expect = 9.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 276 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*RQPMDTFYVSSALVSPI 446
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
>UniRef50_Q4QAD5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 788
Score = 32.3 bits (70), Expect = 9.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 352 HPPELIGCEVHAVEVAEHITSLHIFGD*SEFAEDLSASVSACRSARETSKTLPFNPSEA 176
H P + CE H +V EH+ + + G+ S +E L A + RS+ + PS A
Sbjct: 507 HLPSMRACEQHISDVTEHVLNHLVVGEVS--SEALEARIERLRSSTDAGSVPSGRPSGA 563
>UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 451
Score = 32.3 bits (70), Expect = 9.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 463 TQDVLRPAHSGQSNQKKMCEI--ITRDVTNSELREVVNKLIPDSIAKD 600
TQ+V+ +H+ + ++ C I + +DVT ELR+ +N S KD
Sbjct: 327 TQEVINDSHAQKMRERGRCVIMGLPKDVTVDELRKAINNRFATSNKKD 374
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,263,461
Number of Sequences: 1657284
Number of extensions: 12352514
Number of successful extensions: 33492
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 32453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33484
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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