Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40409
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 38 0.008
03_01_0547 + 4093196-4093657,4094267-4095148 38 0.008
03_01_0544 + 4082528-4082989,4083585-4084466 38 0.008
03_01_0543 + 4076981-4077442,4078145-4079026 38 0.008
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 36 0.032
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 36 0.032
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 36 0.042
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 32 0.52
03_01_0138 - 1089063-1089266,1089590-1089671,1089937-1090390,109... 32 0.52
02_04_0316 - 21978330-21979397 31 0.69
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 31 0.91
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 1.2
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 31 1.2
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 30 1.6
03_04_0127 - 17508808-17509029,17509195-17509938,17510004-175102... 30 1.6
02_04_0462 + 23131433-23132836 30 1.6
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 30 2.1
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 2.8
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 29 2.8
01_05_0173 + 18916930-18917324,18917542-18917638 29 2.8
03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380 29 3.7
10_07_0138 + 13325418-13325954 29 4.9
05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 29 4.9
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 4.9
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 28 6.4
04_01_0103 + 1082077-1082167,1083037-1085477 28 8.5
02_04_0017 + 18937774-18937864,18938505-18940945 28 8.5
01_01_0506 + 3701448-3701591,3702097-3702400,3702894-3703012,370... 28 8.5
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 589 KKEHVNVVFIGHVDAGKSTIGGQIMSLTG 675
+K H+N+V IGHVD+GKST G ++ G
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 589 KKEHVNVVFIGHVDAGKSTIGGQIMSLTG 675
+K H+N+V IGHVD+GKST G ++ G
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 589 KKEHVNVVFIGHVDAGKSTIGGQIMSLTG 675
+K H+N+V IGHVD+GKST G ++ G
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 589 KKEHVNVVFIGHVDAGKSTIGGQIMSLTG 675
+K H+N+V IGHVD+GKST G ++ G
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLG 32
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 35.9 bits (79), Expect = 0.032
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 601 VNVVFIGHVDAGKSTIGGQIMSLTGMV 681
+N+ +GHVD+GKST+ G+++ L G +
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRI 274
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 35.9 bits (79), Expect = 0.032
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 601 VNVVFIGHVDAGKSTIGGQIMSLTGMV 681
+N+ +GHVD+GKST+ G+++ L G +
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRI 274
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 571 VEDTRSKKEHVNVVFIGHVDAG 636
VE+ + K H+NVVFIGHVD G
Sbjct: 97 VEEEKETKRHLNVVFIGHVDPG 118
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 377 PRVEEPPPTTASVPPDVSPTADSWEVE 457
PRVE PPP+ A+ PP + P D + E
Sbjct: 62 PRVEGPPPSPATAPPMLHPREDDEDEE 88
>03_01_0138 -
1089063-1089266,1089590-1089671,1089937-1090390,
1091094-1091634
Length = 426
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 377 PRVEEPPPTTASVPPDVSPTADSWEVEADDALLTPEETMNRKKKIGYTRG 526
P V+ P TA +PP PT W+ +A+ + +P T NR ++G G
Sbjct: 95 PTVKRPAAVTALLPPFSRPTPSKWD-DAEKWISSP--TANRGGRVGSAAG 141
>02_04_0316 - 21978330-21979397
Length = 355
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 126 AEIIGEKGAKDSNDVSSKISTLNVVARFFFPSFSKPSQASDSTIPLPPPRNQKAVLRIQP 305
A I GE G S+D+ S S ++ A + + ++ +++P PPP V + P
Sbjct: 49 ASISGESGPLSSSDIHSVSSEISSAAHLVVLNAASLLSSTVASLPAPPPPPATTVQELPP 108
Query: 306 GVPS 317
V S
Sbjct: 109 VVVS 112
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 592 KEHVNVVFIGHVDAGKSTIGGQI 660
K HVNV IGHVD GK+T+ I
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAI 87
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 604 NVVFIGHVDAGKSTIGGQIMSLTGMV 681
N I HVD GKST+ +++ LTG +
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTI 84
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 604 NVVFIGHVDAGKSTIGGQIMSLTGMV 681
N I H+D GKST+ +++ LTG V
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTV 104
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 628 DAGKSTIGGQIMSLTGMV 681
DAGKST GGQI+ L+G V
Sbjct: 4 DAGKSTAGGQILFLSGQV 21
>03_04_0127 -
17508808-17509029,17509195-17509938,17510004-17510242,
17510334-17510436,17510666-17510770,17510838-17510906,
17510998-17511402,17512048-17512156,17512240-17512295
Length = 683
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 69 LRSATIMSNNGAPDSWENEAEIIGE 143
L I +NN AP SW N +IIGE
Sbjct: 397 LEDRIICTNNSAPLSWYNRTQIIGE 421
>02_04_0462 + 23131433-23132836
Length = 467
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 592 KEHVNVVFIGHVDAGKSTI 648
K HVN+ IGHVD GK+T+
Sbjct: 68 KPHVNIGTIGHVDHGKTTL 86
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 383 VEEPPPTTASVPPDVSPTADSWEVEADDALLTPEETMNRKKKI 511
V PPPT PP TA + PE+ ++KKK+
Sbjct: 281 VAPPPPTPTPTPPRPQGTASNTTAAMPSPPSAPEKKKSKKKKV 323
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 377 PRVEEPPPTTASVPPDVSPTADSWE 451
P +PPP PPD P D+W+
Sbjct: 213 PVTPQPPPPPPPPPPDSKPGVDTWD 237
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 383 VEEPPPTTASVPPDVSPTADSWEVEAD 463
++EPPP A P S TA W ++AD
Sbjct: 5 IDEPPPAPAPPQPKQSTTARRWWMKAD 31
>01_05_0173 + 18916930-18917324,18917542-18917638
Length = 163
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 96 NGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVVARFFFP-SFSKPSQASDSTIPLPPP 272
+G P +WE E+ + G + +S + + R P S + + + T+ +PPP
Sbjct: 24 HGLPGAWERESRKSFDSGTRREGKISGALLHRLISHRLLSPTSLAHAASSPPPTLSVPPP 83
Query: 273 RNQKAV 290
+ + +
Sbjct: 84 PSGRTI 89
>03_01_0155 - 1239184-1239491,1240414-1240812,1241017-1241380
Length = 356
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 377 PRVEEPPPTT-ASVPPDVSPTADSWEVEADDALLTPEETMNRKKKIG 514
P+V +P T A PDV+P + + D L P E + R+KK G
Sbjct: 299 PQVTQPTQETEAGQGPDVTPQQAARDRHPPDNLTYPTEQIRRRKKGG 345
>10_07_0138 + 13325418-13325954
Length = 178
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 421 GRDRCSSRWWFFNTWRSRC 365
G RCS RW WRSRC
Sbjct: 83 GARRCSRRWRRSRRWRSRC 101
>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
Length = 490
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 392 PPPTTASVPPDVSPTADSWEVEADDALLTPE 484
P P PP+ +PT D W+ + + + PE
Sbjct: 92 PDPNPTLTPPNPTPTLDLWDEDEFEGIPVPE 122
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 589 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 681
KK+++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKDNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 377 PRVEEPPPTTASVP---PDVSPTADSWEVEADDALLTPEETMNRKKKIGYTRGW 529
P+ PPP + VP P+ PT +E++ + L PEE N + + W
Sbjct: 526 PQRRPPPPPSPHVPVFKPE-EPTYHEYELDLEPPLDAPEEDYNGGHRPKFANPW 578
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 589 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 681
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 589 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 681
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>01_01_0506 +
3701448-3701591,3702097-3702400,3702894-3703012,
3703118-3703723
Length = 390
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 90 SNNGAPDSWENEAEIIG---EKGAKDSNDVSSKISTLNVVARFFFPSFSKPSQASDSTIP 260
S G P + +N E + E ++ + LN FFP P+ S P
Sbjct: 147 SKQGTPVAHDNTTEQLRKLTEANTIGGSNPRTSSHLLNHHISSFFPVTPLPNTNHGSLAP 206
Query: 261 LPPPRNQKAVL 293
L PPRN++ L
Sbjct: 207 LQPPRNEQPPL 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,094,039
Number of Sequences: 37544
Number of extensions: 299033
Number of successful extensions: 1397
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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