Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40402
         (371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EPF1 Cluster: Chromosome replication initiation : mem...    34   0.95 
UniRef50_A0WCJ6 Cluster: Periplasmic sensor hybrid histidine kin...    31   6.7  
UniRef50_Q9FMK6 Cluster: Lipase/acylhydrolase-like protein; n=2;...    31   6.7  
UniRef50_A5KEB6 Cluster: Putative uncharacterized protein; n=1; ...    31   8.8  
UniRef50_Q6CUM2 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    31   8.8  
UniRef50_P20523 Cluster: Uncharacterized 7.9 kDa protein; n=1; V...    31   8.8  

>UniRef50_Q8EPF1 Cluster: Chromosome replication initiation :
           membrane attachment protein; n=1; Oceanobacillus
           iheyensis|Rep: Chromosome replication initiation :
           membrane attachment protein - Oceanobacillus iheyensis
          Length = 444

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 24  VXSDSKNQNGDSKSKKCSAEKYQTHXTRPHQSHKMRIVYKSXKM-PRVLVRDLVSRNEVI 200
           +   + NQ     S+K + E  +   T+P ++ K +++Y+  ++ P  L++DL   N+  
Sbjct: 257 IFRSNNNQQSVRLSEKNNQEVKKYEVTKP-KTKKEQLIYELERISPTQLLKDLSRGNDAS 315

Query: 201 *PSIQVSVTYMTRCRERDSMYPXHLIHVHYILV 299
              I+V  T MT+   +D   P   + +HY+L+
Sbjct: 316 DQDIKVIETVMTK---QDLPAPVMNVLIHYVLL 345


>UniRef50_A0WCJ6 Cluster: Periplasmic sensor hybrid histidine kinase
           precursor; n=1; Geobacter lovleyi SZ|Rep: Periplasmic
           sensor hybrid histidine kinase precursor - Geobacter
           lovleyi SZ
          Length = 743

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 215 SVSDIHDSLQGARFYVSXSSDTCSLHSCLRSSVSDSIIHIF 337
           SVS++H SL   R  VS S   C  H+ +     +SII +F
Sbjct: 136 SVSEVHQSLFSQRSVVSRSYPLCPTHTLIIEQDLESIIPLF 176


>UniRef50_Q9FMK6 Cluster: Lipase/acylhydrolase-like protein; n=2;
           Arabidopsis thaliana|Rep: Lipase/acylhydrolase-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 338

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 84  SQRYIFYSLSHHSDSCYQTLLNPL 13
           + RY+F+ ++H S+  YQT++ P+
Sbjct: 306 ASRYVFWDIAHPSEKAYQTIIPPI 329


>UniRef50_A5KEB6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 976

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 314 TRMIEDKNVMNMYQMTRIHRISLPATSHVCH*HLNRWLYHFI 189
           T  +  +NVMNM++  ++  +S+ AT  V   H NR +Y  +
Sbjct: 455 THFVVRQNVMNMFRCLKMLSLSVLATDSVTCDHFNRRIYSHV 496


>UniRef50_Q6CUM2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome C of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 793

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 6   VNKED*VXSDSKNQNGDSKSKKCSAEKYQTHXTRPHQSHKMRIVYKSXK 152
           V KED   S+S N N D+K  K + E      T  H S K +++ +S K
Sbjct: 87  VVKEDNDISNS-NSNHDNKYNKLNEESLMKDDTHSHTSQKFKVLQQSMK 134


>UniRef50_P20523 Cluster: Uncharacterized 7.9 kDa protein; n=1;
           Vaccinia virus Copenhagen|Rep: Uncharacterized 7.9 kDa
           protein - Vaccinia virus (strain Copenhagen) (VACV)
          Length = 70

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +2

Query: 221 SDIHDSLQGARFYVSXSSDTCSLHSCLRSSVSDSIIHIFLD 343
           S I DSL G R+Y+S S  T +L   +RS+VS   + I  D
Sbjct: 27  SIIVDSLWGIRWYISLSFTTSTLKMLVRSTVSSICLLISSD 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,563,445
Number of Sequences: 1657284
Number of extensions: 4597675
Number of successful extensions: 10444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10443
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)