Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40402
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   1.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   9.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   9.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   9.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 171 NANGETKRQRTSYTRYQT 188


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
          protein.
          Length = 100

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42 NQNGDSKSKKCSAEKYQT 95
          N NG++K ++ S  +YQT
Sbjct: 3  NANGETKRQRTSYTRYQT 20


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  NQNGDSKSKKCSAEKYQT 95
           N NG++K ++ S  +YQT
Sbjct: 215 NANGETKRQRTSYTRYQT 232


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 323 IIHIFLDWFIEHY 361
           +I  FL  F+EHY
Sbjct: 228 VISTFLQLFLEHY 240


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 323 IIHIFLDWFIEHY 361
           +I  FL  F+EHY
Sbjct: 154 VISTFLQLFLEHY 166


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 93  THXTRPHQSHKMRIVYKSXKMPRVLVR 173
           T+  +P+ S    ++ ++  +PR LVR
Sbjct: 436 TNSNKPNSSDLNMLIKETMPLPRKLVR 462


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 273 LIHVHYILVF 302
           LIHV+Y +VF
Sbjct: 112 LIHVYYTVVF 121


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 273 LIHVHYILVF 302
           LIHV+Y +VF
Sbjct: 112 LIHVYYTVVF 121


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 273 LIHVHYILVF 302
           LIHV+Y +VF
Sbjct: 432 LIHVYYTVVF 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,508
Number of Sequences: 336
Number of extensions: 1270
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)