Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40393
(522 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 154 1e-36
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 149 5e-35
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 148 9e-35
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 147 1e-34
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 123 3e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 118 8e-26
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 117 1e-25
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 117 2e-25
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 105 6e-22
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 99 3e-20
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 94 2e-18
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 92 8e-18
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 90 2e-17
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 85 1e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 3e-14
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 64 1e-09
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 59 5e-08
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 50 2e-05
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 47 3e-04
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 46 4e-04
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 45 0.001
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 42 0.006
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 40 0.035
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 40 0.035
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.046
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 39 0.060
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 39 0.080
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 38 0.14
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 37 0.32
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 37 0.32
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 37 0.32
UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing... 36 0.43
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.74
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 34 2.3
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 3.0
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 4.0
UniRef50_A3HDZ4 Cluster: Aromatic-ring-hydroxylating dioxygenase... 33 4.0
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 33 4.0
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 32 6.9
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 6.9
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory tra... 32 6.9
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 32 6.9
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 32 9.2
UniRef50_Q893B4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_Q0VSQ6 Cluster: Glutamyl-tRNA synthetase-related protei... 32 9.2
UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=... 32 9.2
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 32 9.2
UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 9.2
UniRef50_P52883 Cluster: Uncharacterized protein F46C5.7; n=2; C... 32 9.2
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 154 bits (374), Expect = 1e-36
Identities = 80/134 (59%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
Frame = +3
Query: 147 MEGLCTSCRWRQRQARIP---DETGRPDKQPCSSSD------VKGHSCYRPRRDGERKRK 299
+ G C W+ RI D+ G P KQ ++ KGHSCYRPRR GERKRK
Sbjct: 36 VSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRK 95
Query: 300 SVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRR 479
SVRG IVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+
Sbjct: 96 SVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQ 155
Query: 480 YVVKRVLPAKKEKK 521
YV++R LP K+ KK
Sbjct: 156 YVIRRPLPEKEGKK 169
Score = 136 bits (329), Expect = 3e-31
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPMKQG++TN RVRLL+SKG
Sbjct: 61 FPMKQGIMTNGRVRLLLSKG 80
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 149 bits (360), Expect = 5e-35
Identities = 73/91 (80%), Positives = 80/91 (87%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KGHSCYRPRR GERKRKSVRG IVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRA 138
Query: 429 SKIRKLFNLSKEDDVRRYVVKRVLPAKKEKK 521
S+IRKLFNLSKEDDVR+YVV++ P KE K
Sbjct: 139 SRIRKLFNLSKEDDVRQYVVRK--PLNKEGK 167
Score = 141 bits (342), Expect = 8e-33
Identities = 63/80 (78%), Positives = 71/80 (88%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPMKQGVLT+ RVRLL+SKG
Sbjct: 61 FPMKQGVLTHGRVRLLLSKG 80
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 148 bits (358), Expect = 9e-35
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLL 243
FPMKQGVLT+ R+RLL
Sbjct: 61 FPMKQGVLTHGRLRLL 76
Score = 60.1 bits (139), Expect = 3e-08
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Frame = +3
Query: 174 WRQRQARIP---DETGRPDKQPCSSSD-----VKGHSCYRPRRDGERKRKSVRGYIVDAN 329
W+ Q RI D+ G P KQ + K HSC+ PR + RK K+VR Y V+AN
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEAN 104
Query: 330 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD 470
+S L LV+++K P RLGP R+S I K++ L +EDD
Sbjct: 105 VSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD 141
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 147 bits (357), Expect = 1e-34
Identities = 70/91 (76%), Positives = 78/91 (85%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KGHSCYRPRR GERKRKSVRG IVD NLS LAL++V+KG ++IPGLTD V RRLGPKRA
Sbjct: 79 KGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRA 138
Query: 429 SKIRKLFNLSKEDDVRRYVVKRVLPAKKEKK 521
S IRKL+NL+KEDDVR+YVVKR LP K KK
Sbjct: 139 SNIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
Score = 146 bits (354), Expect = 3e-34
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPMKQGVLTN+RVRLL+ KG
Sbjct: 61 FPMKQGVLTNTRVRLLLKKG 80
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 123 bits (296), Expect = 3e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLLM 246
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 62.5 bits (145), Expect = 6e-09
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Frame = +3
Query: 369 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLPAKKEKK 521
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAK 135
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 118 bits (284), Expect = 8e-26
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPM+QGVL RVR+LM KG
Sbjct: 61 FPMRQGVLFKGRVRILMRKG 80
Score = 108 bits (259), Expect = 9e-23
Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 3/94 (3%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KGH YRPR+DGE KRKS+RG IV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 79 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 138
Query: 429 SKIRKLFNLSKEDD---VRRYVVKRVLPAKKEKK 521
+K+R+LF K D V++ +++R K KK
Sbjct: 139 TKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKK 172
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 117 bits (282), Expect = 1e-25
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPMKQGV+ RVRLL+S+G
Sbjct: 61 FPMKQGVMVRGRVRLLLSEG 80
Score = 102 bits (244), Expect = 6e-21
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
+GHSC+ RR G RKRKSVRG IV ++ VLAL IV+KG EI GLT +PR+LGPKRA
Sbjct: 79 EGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRA 138
Query: 429 SKIRKLFNLSKEDD---VRRYVVKRVLPAKKEK 518
+ I+KLF L KEDD +++ V++R K K
Sbjct: 139 NNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGK 171
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 117 bits (281), Expect = 2e-25
Identities = 54/84 (64%), Positives = 66/84 (78%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KG CYRPR+ GE++RKSVRG IV +LS L L +V+KG EIPGLTD V ++LGPKRA
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRA 179
Query: 429 SKIRKLFNLSKEDDVRRYVVKRVL 500
+KIRKLFNL K DDVR+YV+ R +
Sbjct: 180 TKIRKLFNLDKTDDVRKYVIGRAI 203
Score = 104 bits (249), Expect = 1e-21
Identities = 49/80 (61%), Positives = 57/80 (71%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPM QGVLTN+RVRLL KG
Sbjct: 102 FPMMQGVLTNNRVRLLFKKG 121
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 105 bits (252), Expect = 6e-22
Identities = 49/75 (65%), Positives = 58/75 (77%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KGH YRPR+DGE KRKS+RG IV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 143
Query: 429 SKIRKLFNLSKEDDV 473
+K+R+LF K D V
Sbjct: 144 TKLRRLFGFKKADRV 158
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 99 bits (238), Expect = 3e-20
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = +3
Query: 255 HSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 434
+ CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 435 IRKLFNLSKEDDVRRYVVKR 494
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +1
Query: 19 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 198
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 199 PMKQGVLTNSRVRLLM 246
PM GV TN+RVRLL+
Sbjct: 61 PMMTGVATNNRVRLLL 76
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 GHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 431
G SCYRPR+DGERKRK+VRG I+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 432 KIRKLFNLS-KEDDVRRYVVKR-VLPAK 509
+R +F ++ + D + V+KR V P K
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREVKPGK 167
Score = 92.7 bits (220), Expect = 5e-18
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKG 255
FPMKQGV+T R+RLL+ G
Sbjct: 61 FPMKQGVITPRRIRLLLKTG 80
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 91.9 bits (218), Expect = 8e-18
Identities = 44/81 (54%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = +3
Query: 282 GERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 461
GER+RK+VRG ++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 462 EDDVRRYVVKR--VLPAKKEK 518
+DVR+YVV+R V KK++
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDR 173
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 192
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 193 GFPMKQGVLTNSRVRLLMSKG 255
GFPM GVL +SRV LL+ +G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRG 81
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 90.2 bits (214), Expect = 2e-17
Identities = 37/81 (45%), Positives = 57/81 (70%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 196 FPMKQGVLTNSRVRLLMSKGT 258
FPMK+G+L+ SRV++L+ KG+
Sbjct: 61 FPMKEGILSPSRVKILLKKGS 81
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +3
Query: 276 RDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 455
+ GER RKSVRG IV +SVL + ++ ++ +T+ N + L KR+S +RK+ L
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCL 148
Query: 456 SKEDDVRRYVVKRVLPAKKEKK 521
+K DD+R++ +K K + K
Sbjct: 149 TKTDDIRKHYIKIAKDFKNKVK 170
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
+G CY RR+GERKRKS+RG IV +L L++V+V G + +PGLTD VP+RL PKRA
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRA 144
Query: 429 SKIRKLFNL 455
SKIR+LF L
Sbjct: 145 SKIRRLFGL 153
Score = 76.6 bits (180), Expect = 3e-13
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 19 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 198
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 199 PMKQGVLTNSRVRLLMSKG 255
PM QGVL + R RLL+ +G
Sbjct: 68 PMYQGVLKSQRARLLLRQG 86
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 3e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 153
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/66 (42%), Positives = 47/66 (71%)
Frame = +1
Query: 58 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 237
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 238 LLMSKG 255
L+SKG
Sbjct: 60 PLLSKG 65
Score = 63.3 bits (147), Expect = 3e-09
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
KG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 64 KGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKE 123
Query: 429 SKIRKLFNLSKED 467
K+RK+F + E+
Sbjct: 124 KKLRKMFGVPDEE 136
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 59.3 bits (137), Expect = 5e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
K HSC+ PR + RK K+VR Y V+AN+S L LV+++K P RLGP R+
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 74
Query: 429 SKIRKLFNLSKEDD 470
S I K++ L +EDD
Sbjct: 75 SNISKIYYLCEEDD 88
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/96 (30%), Positives = 55/96 (57%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 196 FPMKQGVLTNSRVRLLMSKGTHVTDRAAMERENVNQ 303
F +K+ + T R+++ + KG+ + +R+ +R+N+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGS-LGNRSHFKRKNLTK 94
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 46.8 bits (106), Expect = 3e-04
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Frame = +1
Query: 10 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 162
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 163 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMER 288
L + GG DK GFPM+ + RVR+L+SKG + ER
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKEKGER 102
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 46.4 bits (105), Expect = 4e-04
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Frame = +1
Query: 10 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 162
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 163 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMER 288
L++ GG DK GFPM+ V RV++L+S+G R ER
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRERGER 102
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +1
Query: 106 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGT 258
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ GT
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 42.3 bits (95), Expect = 0.006
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 55 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 228
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 229 RVRLLMS 249
+ R L+S
Sbjct: 193 KKRALLS 199
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 39.9 bits (89), Expect = 0.035
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 109 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTD 270
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+G + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 39.9 bits (89), Expect = 0.035
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +1
Query: 10 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 189
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 190 QGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMERENV 297
G PM++ V + + +L+ G ER+ V
Sbjct: 59 AGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRV 94
Score = 37.5 bits (83), Expect = 0.18
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 201 DETGRPDKQPCSSSDV-----KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKG 365
D+ GRP ++ SD+ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 366 AQEIPGL 386
+ + L
Sbjct: 117 EEPVAEL 123
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.046
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 10 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 189
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 190 QGFPMKQGV 216
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 39.1 bits (87), Expect = 0.060
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 28 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 201
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 202 MKQGVLTNSRVRLLMSKG 255
M+ + +R RLL+S G
Sbjct: 63 MRPDLPGTARRRLLLSGG 80
Score = 33.5 bits (73), Expect = 3.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 264 YRPRRDGERKRKSVRGYIVDANLSVLALVIVRKG 365
+RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 83 FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 38.7 bits (86), Expect = 0.080
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 255 AL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 142
AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 174 ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 37.9 bits (84), Expect = 0.14
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 19 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 198
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 199 PMKQGVLTNSRVRLLMSKGTHVTDRAAMERE-NVNQFVDILLTPIS 333
MKQ VL + RV LL++ + RE N D + PIS
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPIS 96
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 36.7 bits (81), Expect = 0.32
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 103 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 255
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++G
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEG 80
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 36.7 bits (81), Expect = 0.32
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +1
Query: 109 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMER 288
+G E +A +G K L++ GG+DK G PM+ + +R +L+SKG + D +R
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVGLQDAEKGQR 89
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 36.7 bits (81), Expect = 0.32
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 103 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 255
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEG 76
>UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing
1B; n=1; Homo sapiens|Rep: PREDICTED: SET domain
containing 1B - Homo sapiens
Length = 2145
Score = 36.3 bits (80), Expect = 0.43
Identities = 29/88 (32%), Positives = 39/88 (44%)
Frame = -3
Query: 382 PGISWAPLRTITRAKTERLASTIYPRTDLRFLSPSRRGL*HECPLTSEDEHGCLSGRPVS 203
PG + A RT T A T + TI PR+ LR+ P P TS E G +
Sbjct: 441 PGATRASSRTPTTAATNIIMYTILPRS-LRWPGPQPLS---GVPRTSRSEQSAALG---A 493
Query: 202 SGILACRCRQRHEVHSPSIHRLTDQPLL 119
+ + R R + H P++H QPLL
Sbjct: 494 AAVPRSRLNHRIQPHLPTLHHPPKQPLL 521
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.5 bits (78), Expect = 0.74
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 153 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHS 260
G C RWR ++ + DE G + PC+ DV+G S
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRGCS 52
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 147 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHSC 263
+ G C +CR R+ + +P + GRP+ C SS GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS---GHTC 41
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 246
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 247 S 249
S
Sbjct: 178 S 178
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 3.0
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 345 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 485
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 3.0
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 19 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 195
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 196 FPMKQGVL 219
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 220 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 122
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_A3HDZ4 Cluster: Aromatic-ring-hydroxylating dioxygenase,
beta subunit; n=3; Pseudomonadales|Rep:
Aromatic-ring-hydroxylating dioxygenase, beta subunit -
Pseudomonas putida (strain GB-1)
Length = 159
Score = 33.1 bits (72), Expect = 4.0
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 160 VLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMERENVNQF 306
V R+ GG P + V T SR+R+L G +VT RAA +NV +F
Sbjct: 68 VQRLIGGESISTSPQPRTVRTISRIRVLADDGVNVTVRAA---QNVREF 113
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 33.1 bits (72), Expect = 4.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 154 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS--KGTHVTDRAAMERENV 297
GY L + GG+D GFPM + + R+L+S G H ++ R+ V
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLSGPPGFHPREKGERRRKTV 195
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 32.3 bits (70), Expect = 6.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 16 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL 138
M + ++YPA+ QKL ++ +H++ Y+ E+ AD L
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 67 VVDEHKLRIFYEKRMGAEVEADQLGDEW 150
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 32.3 bits (70), Expect = 6.9
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = +3
Query: 192 RIPDETGRPDKQP--------CSSSDVKGHSCYRPRRDGERKRKSVRGYIVDANLSVLAL 347
R+P+E G+ + +P C+ GH+ R R R R+ G +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 348 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 446
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 515
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 109 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGTHVTDRAAMER 288
+ A +EA + GD KG+ + A D +Q + ++V+ ++++ H TDRA M
Sbjct: 364 LNASIEAAKAGDSGKGFAVVAAEVKDLA----EQSEESTAQVQKILTEIQHATDRAVMAT 419
Query: 289 ENVNQFVDILLTPISRS 339
E + VD + +SR+
Sbjct: 420 EEGVKDVDQGVILMSRT 436
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 154 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS--KGTHVTDRAAMERENV 297
G ++ GG D G PM GV + R ++L++ G H +R R++V
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLAGPPGFHPRERGERRRKSV 204
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 94 FYEKRMGAEVEADQLGDEWKGYVLRVAG 177
F E+R AEVE+ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
>UniRef50_Q893B4 Cluster: Putative uncharacterized protein; n=1;
Clostridium tetani|Rep: Putative uncharacterized protein
- Clostridium tetani
Length = 995
Score = 31.9 bits (69), Expect = 9.2
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = -1
Query: 339 RPRDWRQQYIHELIYVFSLHRGAVCNMSAL*HQKTNTAVCQDALFHRESLLVVAASDTKY 160
R DW + Y+ ELI FSL + N+ +KTN Q A+ R ++ KY
Sbjct: 729 RMSDWMETYLEELI--FSLSYEDLNNLI----EKTNIEFVQKAVSVRNRQVICILETIKY 782
Query: 159 IALPFIA*LISLYFGAHALFVKDTKLVLVHHFEQL 55
+P + IS+ + +K +++ + E+L
Sbjct: 783 KKIPIDSEFISILETGTSQMIKILFEIMIENSEEL 817
>UniRef50_Q0VSQ6 Cluster: Glutamyl-tRNA synthetase-related protein;
n=1; Alcanivorax borkumensis SK2|Rep: Glutamyl-tRNA
synthetase-related protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 304
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +3
Query: 216 PDKQPCSSSDVKGHSCYRPRRDGE----RKRKSVRGY 314
PD+Q C S +++GH C RDG R+R + GY
Sbjct: 132 PDRQLCYSDNIQGHVCNNLHRDGGAFVIRRRDGLFGY 168
>UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=1;
Sinorhizobium medicae WSM419|Rep: Response regulator
receiver protein - Sinorhizobium medicae WSM419
Length = 406
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = +3
Query: 384 LTDGNVPRRLG---PKRASKIRKLFNLSKEDDVRR--YVV 488
L D N+PRRLG P+R + L +L +E D+RR Y+V
Sbjct: 52 LLDVNIPRRLGDRKPQRGGGLELLKDLGRESDLRRPTYIV 91
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 31.9 bits (69), Expect = 9.2
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 KGHSCYRPRRDGERKRKSVRGYIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 428
+G S + E + + +R + V+ LV +R G + L G RRL
Sbjct: 192 QGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFGPLNLGKLKTGE-SRRLSDTEL 250
Query: 429 SKIRKLFNLSKEDDVR-RYVVKRVLPAK 509
K+R+L N D+R R K PAK
Sbjct: 251 KKLRQLLNEKHSPDIRHRKGKKNAAPAK 278
>UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 372
Score = 31.9 bits (69), Expect = 9.2
Identities = 26/69 (37%), Positives = 36/69 (52%)
Frame = -3
Query: 226 CLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 47
C+S P++ A R + RH++H+P + R P RRP A +E P RT+S
Sbjct: 211 CISHPPIA----ATRHQHRHDLHTP-LPRPKFTP--RRPRA--HSFEDNIHPLFRTSSPE 261
Query: 46 PLPGTKRLT 20
P PGT R T
Sbjct: 262 PPPGTTRGT 270
>UniRef50_P52883 Cluster: Uncharacterized protein F46C5.7; n=2;
Caenorhabditis|Rep: Uncharacterized protein F46C5.7 -
Caenorhabditis elegans
Length = 199
Score = 31.9 bits (69), Expect = 9.2
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = -1
Query: 315 YIHELIYVFSLHRGAVCNMSAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFIA* 136
++ L+Y+ + G+V N AL H T +A + L+ + ++ YIA ++A
Sbjct: 68 FVFVLLYL-EFYFGSVYNCPALLHLHTLSAAFMSMVCWLSVLIPIFFGESIYIASRYVAH 126
Query: 135 LISLYFGAHALF 100
+I Y+G +F
Sbjct: 127 VIYKYYGCQVIF 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,530,588
Number of Sequences: 1657284
Number of extensions: 11643416
Number of successful extensions: 35478
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 34376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35455
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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