Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40392
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.66 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.66 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.66 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 HITGLRVTANARLQVERDGK 340
           H+TG+  T  A  Q +RDGK
Sbjct: 117 HMTGMGGTGTAGSQADRDGK 136



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 365 DLSASNIAVNLENAEIISGFINTIGPFIFDSI 460
           DL A  I  +L+N     GF++   PFIF  +
Sbjct: 212 DLEA--IYASLKNLNTDHGFLDGQKPFIFQEV 241


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 HITGLRVTANARLQVERDGK 340
           H+TG+  T  A  Q +RDGK
Sbjct: 118 HMTGMGGTGTAGSQADRDGK 137


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 HITGLRVTANARLQVERDGK 340
           H+TG+  T  A  Q +RDGK
Sbjct: 118 HMTGMGGTGTAGSQADRDGK 137


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 404 AEIISGFINTIGPFIFDSIKPYVLKEAYATIKTTMTKRSMKWRA 535
           A+I   ++N I P +  SIK   +KE  A +    T R+ K+ A
Sbjct: 315 AKICFYWLNEI-PTMPVSIKDQTIKEELALLAQQSTSRTSKFSA 357


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 594 FPYISNDHIQWRYRVWELQIARHFIDLFV 508
           FP+I     Q R   W   +ARH +  F+
Sbjct: 350 FPWIDAIMTQLREEGWIHHLARHAVACFL 378


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 30  PTGLPGAKLP 59
           PTG PGA LP
Sbjct: 116 PTGHPGAALP 125


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 30 PTGLPGAKLP 59
          PTG PGA LP
Sbjct: 8  PTGHPGAALP 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,438
Number of Sequences: 336
Number of extensions: 3017
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)