Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40388
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21539-1|AAA66001.1|   72|Homo sapiens small proline-rich protei...    32   1.9  
BC120938-1|AAI20939.1|   72|Homo sapiens small proline-rich prot...    31   3.3  
AL356867-7|CAI19806.1|   72|Homo sapiens small proline-rich prot...    31   3.3  
AL139417-1|CAI21953.1|   72|Homo sapiens small proline-rich prot...    31   3.3  
AF333955-1|AAK70942.1|   72|Homo sapiens small proline-rich prot...    31   3.3  
AF333954-1|AAK70941.1|   72|Homo sapiens small proline-rich prot...    31   3.3  
X53064-1|CAA37239.1|   72|Homo sapiens small proline-rich protei...    31   4.4  
L05188-1|AAA60576.1|   72|Homo sapiens small proline-rich protei...    31   4.4  
BC128049-1|AAI28050.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
BC096111-1|AAH96111.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
BC096110-1|AAH96110.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
BC096109-1|AAH96109.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
BC096108-1|AAH96108.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
BC011249-1|AAH11249.1|  301|Homo sapiens nitric oxide synthase i...    31   4.4  
AL356867-9|CAI19808.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
AL356867-8|CAI19807.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
AF333952-1|AAK70940.1|   72|Homo sapiens small proline-rich prot...    31   4.4  
DQ060036-1|AAY43130.1|  900|Homo sapiens polymerase (DNA directe...    30   5.8  
AY136549-1|AAN52116.1|  900|Homo sapiens DNA polymerase N protein.     30   5.8  
AL158068-2|CAM20461.1|  900|Homo sapiens polymerase (DNA directe...    30   5.8  
AL136360-1|CAM16854.1|  900|Homo sapiens polymerase (DNA directe...    30   5.8  
AK131239-1|BAD18421.1|  312|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AF044578-1|AAD02338.1|  579|Homo sapiens putative DNA polymerase...    30   5.8  

>M21539-1|AAA66001.1|   72|Homo sapiens small proline-rich protein
           protein.
          Length = 72

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTPIL 608
           CP  CP P  PQ C P  +QC Q+ P++
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYPLV 57


>BC120938-1|AAI20939.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPSPKCPQPCPP--QQCQQKYP 55


>AL356867-7|CAI19806.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPSPKCPQPCPP--QQCQQKYP 55


>AL139417-1|CAI21953.1|   72|Homo sapiens small proline-rich protein
           2E protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKCP 55


>AF333955-1|AAK70942.1|   72|Homo sapiens small proline-rich protein
           2E protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKCP 55


>AF333954-1|AAK70941.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPSPKCPQPCPP--QQCQQKYP 55


>X53064-1|CAA37239.1|   72|Homo sapiens small proline-rich protein
           protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>L05188-1|AAA60576.1|   72|Homo sapiens small proline-rich protein 2
           protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC128049-1|AAI28050.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC096111-1|AAH96111.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC096110-1|AAH96110.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC096109-1|AAH96109.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC096108-1|AAH96108.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>BC011249-1|AAH11249.1|  301|Homo sapiens nitric oxide synthase
           interacting protein protein.
          Length = 301

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 464 DVQTTPNLVGPSRG---IRPLRRLPSIMPIAIRPSIL*PSFRAMCPKNSNTLRM 616
           DVQ  P++  PS+    + P   +PS+MP A    +  PS    CP +   LRM
Sbjct: 141 DVQPGPSVGPPSKDKDKVLPSFWIPSLMPEAKATKLEKPSRTVTCPMSGKPLRM 194


>AL356867-9|CAI19808.1|   72|Homo sapiens small proline-rich protein
           2B protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>AL356867-8|CAI19807.1|   72|Homo sapiens small proline-rich protein
           2A protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>AF333952-1|AAK70940.1|   72|Homo sapiens small proline-rich protein
           2B protein.
          Length = 72

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 525 CPLSCPLPSGPQYCDPPFEQCVQRTP 602
           CP  CP P  PQ C P  +QC Q+ P
Sbjct: 32  CPEPCPPPKCPQPCPP--QQCQQKYP 55


>DQ060036-1|AAY43130.1|  900|Homo sapiens polymerase (DNA directed)
           nu protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 667 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 700


>AY136549-1|AAN52116.1|  900|Homo sapiens DNA polymerase N protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 667 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 700


>AL158068-2|CAM20461.1|  900|Homo sapiens polymerase (DNA directed)
           nu protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 667 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 700


>AL136360-1|CAM16854.1|  900|Homo sapiens polymerase (DNA directed)
           nu protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 667 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 700


>AK131239-1|BAD18421.1|  312|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16155 fis, clone BRAWH1000369, highly  similar
           to Homo sapiens putative DNA polymerase mRNA. ).
          Length = 312

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 199 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 232


>AF044578-1|AAD02338.1|  579|Homo sapiens putative DNA polymerase
           protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 244 EGITSCNKNQTRKIIISVITGGRTSRESARVGIP 143
           E +T  ++ QT+K++ +V+ G    R +A +G+P
Sbjct: 300 EQVTHADREQTKKVVYAVVYGAGKERLAACLGVP 333


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,462,995
Number of Sequences: 237096
Number of extensions: 2429414
Number of successful extensions: 9637
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9631
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)