Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40385
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.7  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.7  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 357 PFIPHNRTY*LAVMIS*SNCGTGTVIGHVSKYSKGIRIT*CRSLST 494
           P  P   T  L+ + S S+ G  TV+     Y KG   T   S  T
Sbjct: 604 PMTPLQSTTALSSITSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGT 649


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 357 PFIPHNRTY*LAVMIS*SNCGTGTVIGHVSKYSKGIRIT*CRSLST 494
           P  P   T  L+ + S S+ G  TV+     Y KG   T   S  T
Sbjct: 605 PMTPLQSTTALSSITSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGT 650


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,379
Number of Sequences: 2352
Number of extensions: 15203
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)