Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40376
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase pitch...    29   4.2  
AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p pro...    29   4.2  
AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p pro...    29   4.2  
AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB...    29   4.2  
AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA...    29   4.2  
AY060465-1|AAL25504.1|   71|Drosophila melanogaster SD04624p pro...    28   9.7  

>U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase
           pitchoune protein.
          Length = 663

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 300 VQIYSPTEQSNLETINNFYHILNEAIQEHTHKNLIVMGDFNGQIGARRPGE 452
           V I SPT + +++T    + +L E +  H H   +VMG  N Q+ + + G+
Sbjct: 245 VIIISPTRELSMQT----FGVLKELMAHHHHTYGLVMGGSNRQVESEKLGK 291


>AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p
           protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 300 VQIYSPTEQSNLETINNFYHILNEAIQEHTHKNLIVMGDFNGQIGARRPGE 452
           V I SPT + +++T    + +L E +  H H   +VMG  N Q+ + + G+
Sbjct: 262 VIIISPTRELSMQT----FGVLKELMAHHHHTYGLVMGGSNRQVESEKLGK 308


>AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p
           protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 300 VQIYSPTEQSNLETINNFYHILNEAIQEHTHKNLIVMGDFNGQIGARRPGE 452
           V I SPT + +++T    + +L E +  H H   +VMG  N Q+ + + G+
Sbjct: 262 VIIISPTRELSMQT----FGVLKELMAHHHHTYGLVMGGSNRQVESEKLGK 308


>AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB,
           isoform B protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 300 VQIYSPTEQSNLETINNFYHILNEAIQEHTHKNLIVMGDFNGQIGARRPGE 452
           V I SPT + +++T    + +L E +  H H   +VMG  N Q+ + + G+
Sbjct: 262 VIIISPTRELSMQT----FGVLKELMAHHHHTYGLVMGGSNRQVESEKLGK 308


>AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA,
           isoform A protein.
          Length = 680

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 300 VQIYSPTEQSNLETINNFYHILNEAIQEHTHKNLIVMGDFNGQIGARRPGE 452
           V I SPT + +++T    + +L E +  H H   +VMG  N Q+ + + G+
Sbjct: 262 VIIISPTRELSMQT----FGVLKELMAHHHHTYGLVMGGSNRQVESEKLGK 308


>AY060465-1|AAL25504.1|   71|Drosophila melanogaster SD04624p
           protein.
          Length = 71

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 585 PHALSVLLKIVFKIVNLFSS-AKFVIFPHFCFWS 487
           P+ ++   K    +V L SS A  ++F  FCFWS
Sbjct: 13  PYTINQFSKTAAHVVGLASSYALLILFYFFCFWS 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,841,029
Number of Sequences: 53049
Number of extensions: 637457
Number of successful extensions: 1542
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)