Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40370
(556 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interr... 29 3.2
AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA pr... 29 3.2
AE014296-3140|AAO41232.1| 514|Drosophila melanogaster CG9614-PL... 29 4.2
AE014296-3139|AAO41231.1| 409|Drosophila melanogaster CG9614-PE... 29 4.2
X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Dros... 29 5.6
BT001766-1|AAN71521.1| 533|Drosophila melanogaster RH09188p pro... 28 7.4
AY058792-1|AAL14021.1| 460|Drosophila melanogaster SD10060p pro... 28 7.4
AE013599-3693|AAF47067.3| 460|Drosophila melanogaster CG4797-PA... 28 7.4
AE013599-3692|AAM68271.2| 533|Drosophila melanogaster CG4797-PB... 28 7.4
>U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus
interruptus dominant proteinprotein.
Length = 1397
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 56 IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
IE+N C WR+ ++ I EL++ ++N HI + + E
Sbjct: 449 IETN---CHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489
>AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA
protein.
Length = 1397
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 56 IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
IE+N C WR+ ++ I EL++ ++N HI + + E
Sbjct: 449 IETN---CHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489
>AE014296-3140|AAO41232.1| 514|Drosophila melanogaster CG9614-PL,
isoform L protein.
Length = 514
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 244 KINGITILNNSGQMHYINKWIVLNKKKDSQINLTPILTKP 363
KING T N G H + IV+NK++ + + + +LT+P
Sbjct: 239 KINGFTHARNKGSAH---ETIVMNKQRQNDL-IADLLTRP 274
>AE014296-3139|AAO41231.1| 409|Drosophila melanogaster CG9614-PE,
isoform E protein.
Length = 409
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 244 KINGITILNNSGQMHYINKWIVLNKKKDSQINLTPILTKP 363
KING T N G H + IV+NK++ + + + +LT+P
Sbjct: 134 KINGFTHARNKGSAH---ETIVMNKQRQNDL-IADLLTRP 169
>X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein (
Drosophila ciD (cubitusinterruptus Dominant) locus mRNA.
).
Length = 1377
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 56 IESNQGLCTWRATKVITIQVSELIEDVDNTHIDEENNSLIIEQE 187
IE+N C WR ++ I EL++ ++N HI + + E
Sbjct: 449 IETN---CHWRRCRIEFITQDELVKHINNDHIQTNKKAFVCRWE 489
>BT001766-1|AAN71521.1| 533|Drosophila melanogaster RH09188p
protein.
Length = 533
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 291 VMHLATVV*NSYSIDFDSLKFIFSKSIG*VTLICCSCSIIKLLFSSSMCVLSTSSINS-L 115
V+ A + + + +FDS + + ++ V +ICC + L+F ++ S I S L
Sbjct: 319 VIFYAVDMISEFGAEFDSKQAAIATAV--VRVICCMVFCVVLIFVRRRRIMIVSGIGSGL 376
Query: 114 TCIVITL 94
C+V+++
Sbjct: 377 FCLVLSV 383
>AY058792-1|AAL14021.1| 460|Drosophila melanogaster SD10060p
protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 291 VMHLATVV*NSYSIDFDSLKFIFSKSIG*VTLICCSCSIIKLLFSSSMCVLSTSSINS-L 115
V+ A + + + +FDS + + ++ V +ICC + L+F ++ S I S L
Sbjct: 246 VIFYAVDMISEFGAEFDSKQAAIATAV--VRVICCMVFCVVLIFVRRRRIMIVSGIGSGL 303
Query: 114 TCIVITL 94
C+V+++
Sbjct: 304 FCLVLSV 310
>AE013599-3693|AAF47067.3| 460|Drosophila melanogaster CG4797-PA,
isoform A protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 291 VMHLATVV*NSYSIDFDSLKFIFSKSIG*VTLICCSCSIIKLLFSSSMCVLSTSSINS-L 115
V+ A + + + +FDS + + ++ V +ICC + L+F ++ S I S L
Sbjct: 246 VIFYAVDMISEFGAEFDSKQAAIATAV--VRVICCMVFCVVLIFVRRRRIMIVSGIGSGL 303
Query: 114 TCIVITL 94
C+V+++
Sbjct: 304 FCLVLSV 310
>AE013599-3692|AAM68271.2| 533|Drosophila melanogaster CG4797-PB,
isoform B protein.
Length = 533
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 291 VMHLATVV*NSYSIDFDSLKFIFSKSIG*VTLICCSCSIIKLLFSSSMCVLSTSSINS-L 115
V+ A + + + +FDS + + ++ V +ICC + L+F ++ S I S L
Sbjct: 319 VIFYAVDMISEFGAEFDSKQAAIATAV--VRVICCMVFCVVLIFVRRRRIMIVSGIGSGL 376
Query: 114 TCIVITL 94
C+V+++
Sbjct: 377 FCLVLSV 383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,786,399
Number of Sequences: 53049
Number of extensions: 419456
Number of successful extensions: 949
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -