Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40366
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    25   2.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.1  

>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1

Query: 145 HRMAVAGTALRNY 183
           HRM V GT LRNY
Sbjct: 223 HRMVVDGTFLRNY 235


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 288 IIAKNNSGSASKQWLIVDLNRFDTLSEHHEKQRHGHS 398
           +I +++ G    QW   DL    T+S++H+   +G S
Sbjct: 81  LIVRSSKGVEVYQWNKPDLKLQYTVSKYHDHSGYGSS 117


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 336 VDLNRFDTLSEHHEKQRHGHSEVVTEISNDVKHTIYRSNNSHGKGLVELVEQVPGL 503
           V + +F+ + E  +    GH  V+     +  HT + S  +  KG + L++ V GL
Sbjct: 94  VGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERTKPKG-IALLQLVNGL 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,823
Number of Sequences: 2352
Number of extensions: 17363
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)