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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40359
         (686 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom...    57   2e-09
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po...    57   2e-09
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb...    55   1e-08
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom...    51   1e-07
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar...    48   2e-06
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb...    43   4e-05
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb...    42   6e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom...    42   8e-05
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom...    41   2e-04
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S...    38   0.001
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po...    38   0.001
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M...    38   0.002
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ...    32   0.089
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom...    29   0.48 
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family...    28   1.1  
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po...    27   1.9  
SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces pombe...    27   3.4  
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos...    25   7.8  
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|...    25   7.8  

>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 236

 Score = 57.2 bits (132), Expect = 2e-09
 Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 225 KSISQ*NKTVVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYD 404
           K +S+    +V   D+NN S ++  ++K + ++ ++DVL+NNAG      +E+T+  Q  
Sbjct: 8   KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67

Query: 405 RIMNTNVRGPYYLTMLAIPHLIKTK--GNIVNVSSV 506
            I NTNV G   + + AI  + +++  G I+NVSS+
Sbjct: 68  NIFNTNVFGALEV-IKAITPIFRSQHNGMIINVSSI 102



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 509 GLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 646
           G  +FP    Y  +K AI+  +  +  E+   GV+V  + PG  AT
Sbjct: 104 GKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTAT 149


>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 236

 Score = 57.2 bits (132), Expect = 2e-09
 Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 225 KSISQ*NKTVVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYD 404
           K +S+    +V   D+NN S ++  ++K + ++ ++DVL+NNAG      +E+T+  Q  
Sbjct: 8   KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67

Query: 405 RIMNTNVRGPYYLTMLAIPHLIKTK--GNIVNVSSV 506
            I NTNV G   + + AI  + +++  G I+NVSS+
Sbjct: 68  NIFNTNVFGALEV-IKAITPIFRSQHNGMIINVSSI 102



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 509 GLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 646
           G  +FP    Y  +K AI+  +  +  E+   GV+V  + PG  AT
Sbjct: 104 GKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTAT 149


>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 258

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = +3

Query: 264 ADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYL 443
           AD++    +E  I+K +     +DVL+NNAG+ +    E  S   +D  ++  +RG Y  
Sbjct: 52  ADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLT 111

Query: 444 TMLAIPHLIK--TKGNIVNVSSV 506
               IPH+ K    G+IVN+ SV
Sbjct: 112 QRYVIPHMAKQGKGGSIVNIGSV 134



 Score = 30.3 bits (65), Expect = 0.27
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 536 AYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVI 640
           AY  +K+ ++  T+ +A+     G+RVN   PG I
Sbjct: 144 AYSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTI 178


>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 259

 Score = 51.2 bits (117), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +1

Query: 91  KVVIITGASSGIGAETAYEFAKL-NAKLVLTGRKKENLDNVASDCESRSPSKIKPL 255
           K ++ITGASSGIG  TA+E AK+   KL+L  R+   ++ +A + ES+    + PL
Sbjct: 7   KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPL 62



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +3

Query: 267 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRI--MNTNVRGPYY 440
           D+++   +  +I+     +  +DVL+NNAG L  GT +   L   D +  + TNV G   
Sbjct: 65  DVSDLKSIPGVIESLPKEFADIDVLINNAG-LALGTDKVIDLNIDDAVTMITTNVLGMMA 123

Query: 441 LTMLAIP-HLIKTKGNIVNVSSV 506
           +T   +P    K KG+I+NV S+
Sbjct: 124 MTRAVLPIFYSKNKGDILNVGSI 146



 Score = 34.7 bits (76), Expect = 0.013
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 509 GLRSFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 646
           G  S+     YC +KSA+ QFT  +  E     +R+  V+PG++ T
Sbjct: 148 GRESYVGGSVYCSTKSALAQFTSALRKETIDTRIRIMEVDPGLVET 193


>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 236

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 19/43 (44%), Positives = 29/43 (67%)
 Frame = +2

Query: 518 SFPNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIAT 646
           + P    Y  SK+ ++ FT+ +A EVA KG+RVNA++PG + T
Sbjct: 144 ALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDT 186



 Score = 39.1 bits (87), Expect = 6e-04
 Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
 Frame = +3

Query: 228 SISQ*NKTVVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDR 407
           S+++  +  + +AD+  +SD++N+  K++    ++D +V+ AGVL+S     TS  + D 
Sbjct: 46  SVAKGQQHTLTIADV--QSDMKNL--KSIFESVEIDTVVHAAGVLQSSLCVRTSEKEIDS 101

Query: 408 IMNTNVRGPYYLTMLAIPHLIKTKGN-----IVNVSS 503
           I+ TN+     L+ +AI    + K +     I+N+SS
Sbjct: 102 IICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISS 138



 Score = 25.4 bits (53), Expect = 7.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 97  VIITGASSGIGAETAYEFAKLNAKLVLTGRKKENL 201
           V+ITG SSG+G   A  +++   +  + GR + +L
Sbjct: 4   VLITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHL 38


>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 247

 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 300 IKKTVDNYHQLDVLVNNAGVLES-GTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKT 476
           I+  +  + +LD ++ NAGVLE    I    + ++ ++ + N          AIPHL KT
Sbjct: 69  IETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKT 128

Query: 477 KGNIVNVSS 503
           KG IV VSS
Sbjct: 129 KGTIVIVSS 137



 Score = 30.7 bits (66), Expect = 0.21
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 85  ANKVVIITGASSGIGAETAYEFAKLNAKLVLTGR 186
           A KV+++TG+S GIG  TA E  +  AK++   R
Sbjct: 5   AEKVILLTGSSKGIGLATA-EALQKKAKVIAVSR 37


>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 339

 Score = 42.3 bits (95), Expect = 6e-05
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +1

Query: 25  VINLSRNFTKL----WKLLCTEMFANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKK 192
           ++N  + +T L    W          KV ++TG+S GIG  TA E A+  AK+ L GR +
Sbjct: 17  IVNTLKEYTGLNTPKWTFNDIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNE 76

Query: 193 ENLDNV 210
           E    V
Sbjct: 77  EKYQKV 82



 Score = 29.1 bits (62), Expect = 0.63
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +3

Query: 267 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYYLT 446
           D+ +   V    +  +    +L +LVNNAG++ +   E T    Y+  + TN    Y  T
Sbjct: 101 DLLDFESVYQAAESFIAKEEKLHILVNNAGIM-NPPFELTK-DGYELQIQTNYLSHYLFT 158

Query: 447 MLAIPHLIKT 476
            L +P L +T
Sbjct: 159 ELLLPTLRRT 168


>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 292

 Score = 41.9 bits (94), Expect = 8e-05
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = +3

Query: 243 NKTVVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTN 422
           +K + +  D+ +   VE   K     +  +D+++NNAG    G  E+ ++ +  R MN N
Sbjct: 47  SKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVN 106

Query: 423 VRGPYYLTMLAIPHLIKT--KGNIVNVSSV 506
             G  Y+T  A+  + ++   G I+ +SSV
Sbjct: 107 FWGVAYITKEALNLMRESGKGGRILQISSV 136


>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 286

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +2

Query: 524 PNVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL 652
           P++L Y  +K AI  FTR ++ + A  G+RVNAV PG I T L
Sbjct: 187 PDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPL 229



 Score = 37.1 bits (82), Expect = 0.002
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 330 LDVLVNNAGVLE-SGTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKTKGNIVNVSSV 506
           +DVLVNN    + + +IE     Q+D    TN+   +++T  AI H+ K+  +IVN SS+
Sbjct: 122 IDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM-KSGSSIVNCSSI 180



 Score = 29.5 bits (63), Expect = 0.48
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 85  ANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKKENLD 204
           A K  ++TG  SGIG   A  FA+  + LV++   +E  D
Sbjct: 41  AEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDD 80


>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 296

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 24/82 (29%), Positives = 39/82 (47%)
 Frame = +3

Query: 261 VADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPYY 440
           V D ++  +VE  ++K  +    L  L+NNAG   S       +    ++M+ N  G   
Sbjct: 57  VTDEDSVREVEQEVRKFTNG--SLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIR 114

Query: 441 LTMLAIPHLIKTKGNIVNVSSV 506
           +       LI+ KG IVNV+S+
Sbjct: 115 MNKAFQHQLIRAKGTIVNVNSL 136



 Score = 32.7 bits (71), Expect = 0.051
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 79  MFANKVVIITGASSG-IGAETAYEFAKLNAKLVLTGRKKENLDNV 210
           M A K V+ITG S G IG   A +F +   +++ T R+ E +DN+
Sbjct: 1   MEAEKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNL 45


>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 261

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = +2

Query: 527 NVLAYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL 652
           ++ AYC SK+A+ Q  + +A+E A +  R+N+V+PG  AT +
Sbjct: 168 HIAAYCASKAAVRQLCKALAVEWA-EFARINSVSPGYFATDM 208



 Score = 26.6 bits (56), Expect = 3.4
 Identities = 12/57 (21%), Positives = 30/57 (52%)
 Frame = +3

Query: 267 DMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTNVRGPY 437
           D++    VE  +++    + ++ V+V NAG+    ++  +   +++++MN N    Y
Sbjct: 78  DISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVY 134


>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +1

Query: 100 IITGASSGIGAETAYEFAKLNAKLVLTGRKKENLDNVASDCESRSPSKIKPL 255
           ++TGA+ GIG E A + A     +VL  R +E LD +A + E+ +  K + +
Sbjct: 61  VVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTI 112


>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 255

 Score = 31.9 bits (69), Expect = 0.089
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 73  TEMFA--NKVVIITGASSGIGAETAYEFAKLNAKL-VLTGRKKENLDNVA 213
           T MF+   K  +ITG S GIG   A  FA   + + +L GR K+ L+  A
Sbjct: 2   TSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAA 51



 Score = 29.1 bits (62), Expect = 0.63
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 536 AYCISKSAIDQFTRCVALEVALKGVRVNAVNPGVIATGL 652
           +Y  +K+A+    R +A+E A    RVN+V+PG I T L
Sbjct: 162 SYHATKAAVKHLARALAVEWA-PFARVNSVSPGYIDTDL 199


>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 397

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 94  VVIITGASSGIGAETAYEFAKLNAKLVL 177
           VV++TG SSGIG     + A L A++V+
Sbjct: 77  VVMVTGGSSGIGQVVVEKLASLGAQVVI 104


>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 286

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 243 NKTVVVVADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLESGTIETTSLAQYDRIMNTN 422
           +K   +  ++  + DVE  +            L+N A +     + + S  +  +   TN
Sbjct: 78  SKFSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETN 137

Query: 423 VRGPYYLTMLAIPHLIKTKG-NIVNVSS 503
           V G   +T    P L++    ++VN++S
Sbjct: 138 VIGQLAITSALFPLLLQDPNPHVVNIAS 165


>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 253

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +3

Query: 261 VADMNNESDVENIIKKTVDNYHQLDVLVNNAGVLES-GTIETTSLAQYDRIMNTNVRGPY 437
           V+ + + ++    + K VD    +DVL  N+ V  S G +  T    ++    TNV GP 
Sbjct: 63  VSSLESANEAAQEVTKVVD---AVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPI 119

Query: 438 YLTMLAIPHLIKTKGNIVNVSS 503
           ++     P + K +  I+  +S
Sbjct: 120 HVYQAFYPLIKKGRSKIIVFTS 141


>SPBC3D6.10 |apn2||AP-endonuclease Apn2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 523

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 255 VVVADMNNESDVENIIKKTVDN 320
           + V D NNESD+   +KK V+N
Sbjct: 421 IEVLDNNNESDIGLTVKKKVEN 442


>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
           Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 372

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +3

Query: 363 ESGTIETTSLAQYDRIMNTNVRGPYYLTMLAIPHLIKTKGNIVNV 497
           +S TI+  +   +D +++  V+ PY++T +   HL+    N+ +V
Sbjct: 282 DSSTIDDQAKLLFDYVVSQVVKYPYFVTDIYQIHLLGVYLNLKHV 326


>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 336

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 85  ANKVVIITGASSGIGAETAYEFAKLNAKLVLTGRKKENLDNV 210
           + K+V++TG +  IGA  A +  +   ++  T R  E  D +
Sbjct: 2   SGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADEL 43


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,792,690
Number of Sequences: 5004
Number of extensions: 56243
Number of successful extensions: 174
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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