Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40339
(610 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 164 2e-39
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 145 8e-34
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 99 7e-20
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 96 7e-19
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 92 1e-17
UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium am... 89 8e-17
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 87 3e-16
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 82 9e-15
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 81 2e-14
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 71 2e-11
UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP syn... 70 4e-11
UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1; ... 57 4e-07
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 57 4e-07
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 56 5e-07
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 51 2e-05
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 50 4e-05
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 48 1e-04
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 47 4e-04
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 45 0.001
UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,... 45 0.002
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 44 0.004
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 43 0.007
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 42 0.009
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.33
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 37 0.33
UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole geno... 36 0.99
UniRef50_Q2AHD4 Cluster: Helix-hairpin-helix motif:Radical SAM; ... 34 2.3
UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5; ... 34 3.0
UniRef50_UPI000049A37D Cluster: hypothetical protein 6.t00086; n... 33 4.0
UniRef50_Q5ZY18 Cluster: Formamidopyrimidine-DNA glycosylase (EC... 33 4.0
UniRef50_Q00Y22 Cluster: [S] KOG4674 Uncharacterized conserved c... 33 5.3
UniRef50_Q84P69 Cluster: Fructose-6-phosphate 1-phosphotransfera... 32 9.3
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 164 bits (398), Expect = 2e-39
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
SMKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIE+QV +IYCG
Sbjct: 431 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCG 490
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIK 257
VRGH+DK+DP+KIT FEKEF QHIK
Sbjct: 491 VRGHLDKMDPAKITKFEKEFLQHIK 515
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 254 QTSHQGLLSTIAKDGQITPESDASLKKIVNDFLATF 361
+TS Q LL TIAKDG I+ SDA LK IV F++TF
Sbjct: 515 KTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF 550
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 145 bits (351), Expect = 8e-34
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
+MKLELAQYREVAAFAQFGSDLDAATQQLL+RG+RLTELLKQGQY PMAIEEQV +IY G
Sbjct: 432 TMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAG 491
Query: 183 VRGHIDKLDPSKITAFEKEFTQHI 254
VRG++DKL+PSKIT FE F H+
Sbjct: 492 VRGYLDKLEPSKITKFENAFLSHV 515
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 233 EGIYSTHQTS-HQGLLSTIAKDGQITPESDASLKKIVNDFLATF 361
E + +H S HQ LL TI DG+I+ +SDA LK+IV +FLA F
Sbjct: 508 ENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 99.1 bits (236), Expect = 7e-20
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
+KLELAQYRE+AAF+QF SDLDAAT++ L+RG RL ELLKQ + P+ +EEQV ++Y G
Sbjct: 391 IKLELAQYREMAAFSQFASDLDAATRKQLDRGARLVELLKQPETSPLPVEEQVVVLYAGT 450
Query: 186 RGHIDKLDPSKITAFEKEFTQHIK 257
RG++D + K+ A+E ++
Sbjct: 451 RGYVDPIAVDKVVAYEAALLSELR 474
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 95.9 bits (228), Expect = 7e-19
Identities = 44/87 (50%), Positives = 59/87 (67%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
S++L+L+QYRE+ AFA F SDLDA ++ L RG RL ELLKQ QY PM +EEQV ++ G
Sbjct: 392 SLRLDLSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQYQPMPVEEQVISLFLG 451
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIKLA 263
GH+D + + FE E HI++A
Sbjct: 452 TGGHLDSVPVGDVRRFETELLDHIRVA 478
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = +3
Query: 63 DLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLDPSKITAFEKEF 242
+LDAATQQLLNRG +LTELLKQ QYVPM EEQV +IY GVRG +DK+ S+I FE++F
Sbjct: 507 NLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGVRGFLDKVQTSEIAKFEEKF 566
Query: 243 TQHIK 257
H++
Sbjct: 567 LTHLR 571
>UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium
ampeloprasum|Rep: CF1ATPase alpha-subunit - Allium
porrum (Leek)
Length = 136
Score = 89.0 bits (211), Expect = 8e-17
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
+KLELAQ+ E+ AFAQF SDLD ATQ L RG RL ELLKQ Q P+ +EEQ+ IY G
Sbjct: 12 LKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSDPLTVEEQIATIYIGA 71
Query: 186 RGHIDKLDPSKITAFEKEFTQHIK 257
G++D L+ +I F + ++K
Sbjct: 72 NGYLDSLEIGQIKKFLIKLRTYLK 95
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 87.0 bits (206), Expect = 3e-16
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
++KLELAQYREV FA+FG+ LDA T++ LNRG RL ELLKQGQYVP+ + Q+ ++ G
Sbjct: 477 TLKLELAQYREVMEFAKFGASLDAETKRQLNRGARLVELLKQGQYVPLEVSVQIVFVFLG 536
Query: 183 VRGHID 200
+ G +D
Sbjct: 537 ISGLLD 542
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 82.2 bits (194), Expect = 9e-15
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
S++LELAQ+RE+ AF+ F SDLDAA++ L RG RL ELLKQ QY P+ +E+Q+ IY
Sbjct: 392 SLRLELAQFRELEAFSAFASDLDAASKAQLERGARLVELLKQDQYSPIPVEDQIVSIYLA 451
Query: 183 VRGHIDKLDPSKITAFEKEFTQHI 254
G D + + FE E +
Sbjct: 452 GEGVFDSVPVGDVRRFEAELLDEL 475
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
++K+ LAQYR++ AFA F SDLD +++ L+RG RL ELLKQGQ+ P +EEQV ++ G
Sbjct: 394 TLKISLAQYRDMQAFAMFASDLDDTSRRQLDRGARLMELLKQGQFSPYPVEEQVISVWGG 453
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIKLATRV 272
G D + + FE + ++++ + V
Sbjct: 454 TTGKFDDVPVGDVLRFEGDVLEYLRSHSNV 483
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
+KL +QYRE+ +F+QFGSDLD T+ L +G R+ E+LKQ + P+ +E+QV +IY V
Sbjct: 401 LKLLYSQYRELQSFSQFGSDLDQDTKDRLAQGERIVEVLKQSKNSPVDVEKQVLLIYAVV 460
Query: 186 RGHIDKLDPSKITAFEKE 239
++ K+ I +EK+
Sbjct: 461 NNYLKKIPVEDIREYEKD 478
>UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP
synthase; n=23; Gammaproteobacteria|Rep: Alpha subunit
of membrane-bound ATP synthase - Buchnera aphidicola
Length = 224
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
++ LAQY+E++AF+QF SDLD T+ L G +L E+LKQ QY M++ EQ I+Y
Sbjct: 104 IRTALAQYQELSAFSQFSSDLDELTRNQLIYGKKLIEILKQQQYQSMSVAEQALILYSAD 163
Query: 186 RGHIDKLDPSKITAFEK 236
+G I+ + KI +FE+
Sbjct: 164 QGFINDVKIEKIKSFEQ 180
>UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01079.1 - Gibberella zeae PH-1
Length = 175
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +3
Query: 108 LTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLDPSKITAFEKEFTQHIK 257
LTELLKQ QY PMA+ E V +I+ GV G +D + +KI +E +F H+K
Sbjct: 89 LTELLKQKQYSPMAVTEMVPLIFAGVNGFLDTIPVNKILQWESDFLAHLK 138
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
++ L L+QY E+ FG+ LD + +++ G LTEL KQ P+++ E +TI+Y
Sbjct: 376 NLTLILSQYEELKELLDFGNALDDGSMKMVTDGRMLTELFKQNILSPLSVTELITILYAF 435
Query: 183 VRGHIDKLDPSKITAFE 233
G + K+ P+ + +F+
Sbjct: 436 QNGFLTKMAPANVQSFK 452
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCG 182
S+KLELA YRE+ AF+QFGSDLD T+++L G + ++KQ P ++ I++
Sbjct: 382 SLKLELANYRELEAFSQFGSDLDDETKRILKLGKAVMAVIKQAPNKPYNQTDEAIILFTV 441
Query: 183 VRGHIDKLDPSKITAFEKEFTQHIK 257
I ++ +I F++ + K
Sbjct: 442 KEKLIPQVPVERIQDFKEYLLNYFK 466
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = -3
Query: 242 KFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCSGIQV 63
+ LLEG+D +LV+V D V+ DL + L LL+EL + ++VEQ L +++
Sbjct: 104 ELLLEGADLAHRKLVEVAVDAGVDHRDLLFHLQRRELRLLQELGEARAAVEQTLGRDVEI 163
Query: 62 RTELGKSCDLTVLSQ 18
R EL + L VL Q
Sbjct: 164 RAELREGRHLAVLRQ 178
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTII 173
+KL LAQ+ E+ AF+QF SDL T + L G R+ E+LKQ PM+I +Q ++
Sbjct: 358 LKLTLAQFVELEAFSQFASDLGEDTARALANGRRIREVLKQDVASPMSIPQQCAVL 413
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQV 164
+K++ +++ EV F +FG+ L+ T +L+ RG RL E+LKQ Q+ P +E +V
Sbjct: 382 LKIDYSRFIEVEVFTKFGAHLEEETAKLIRRGERLREILKQPQFHPFPLEHEV 434
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
+KL AQ+ E+ FA+FG+ LD T +++ G R+ LKQ + P+++ Q+ ++
Sbjct: 388 LKLAYAQFEELETFARFGARLDENTTKIIEHGRRIRACLKQPESAPVSVAAQIAVLLALS 447
Query: 186 RGHIDKLDPSKITAFEK 236
D ++ +++T E+
Sbjct: 448 AELFDGVELNQMTEAEQ 464
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
+++ LAQYRE+ AF++F SDLD+ T+ L G ++T L+KQ + I E + I+ +
Sbjct: 366 IRIMLAQYRELEAFSKFSSDLDSETKNQLIIGEKITILMKQNIHDVYDIFELILILLI-I 424
Query: 186 RGHIDKLDP-SKITAFEKEFTQHIK 257
+ +L P +++ FE + +++
Sbjct: 425 KHDFFRLIPINQVEYFENKIINYLR 449
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -3
Query: 203 LVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 24
LV+V + D +L LL +L + ++V+QLLC G++V EL + VL
Sbjct: 362 LVEVALGAGEDHADDLGIGQRRVLRLLHQLGQARTTVQQLLCGGVEVGAELREGRHFAVL 421
Query: 23 SQFQFH 6
QFQ H
Sbjct: 422 RQFQLH 427
>UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,
alpha subunit; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG0056: F0F1-type ATP synthase, alpha subunit
- Magnetospirillum magnetotacticum MS-1
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 108 LTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLDPSKITAFEKEFTQHI 254
+TELLKQ QY PM++ +Q +++ RG++ ++ SKI +FE ++
Sbjct: 1 MTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYV 49
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
MKL+ Q+ E+ F +FG+ L++ + + RG L E+L+Q + P+ E Q+ +
Sbjct: 391 MKLDYLQFLELEIFTRFGARLESGMEARIRRGRLLREILRQERLQPLPPEFQLAWMTAYN 450
Query: 186 RGHIDKLDPSKI 221
G +D + P +
Sbjct: 451 EGLLDAMPPGSV 462
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3
Query: 3 SMKLELAQYREVAAFAQFGSDLD 71
+MKL LAQYREVAAFAQF SDLD
Sbjct: 274 TMKLGLAQYREVAAFAQFSSDLD 296
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +3
Query: 6 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGV 185
++L+ AQ+ E+ AF +FG DA + + RG R+ L+ Q ++ + ++V ++
Sbjct: 393 LRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALA 452
Query: 186 RGHIDKLDPSKI 221
G +D + P +
Sbjct: 453 AGTLDAMSPDLV 464
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 37.1 bits (82), Expect = 0.33
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -3
Query: 203 LVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 24
+VD +D DL L +L LL++L + ++ E L S +QV TELG+S L VL
Sbjct: 66 VVDEAVVGREDDQDLLLVRDRTVLRLLQDLDQACAAGELHLGSLVQVGTELGESRHLAVL 125
Query: 23 SQFQFHG 3
+ Q G
Sbjct: 126 GEGQTQG 132
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 37.1 bits (82), Expect = 0.33
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -3
Query: 254 DVLSKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCS 75
+V ++ L E +D G + + + + H +L LL +L T +V QLL
Sbjct: 74 EVGNQRLFEATDLGDFNVGQEPTLSGIQRQRHVRDGHRSVLLLLHQLGNT-LTVLQLLTG 132
Query: 74 G-IQVRTELGKSCDLTVLSQ 18
G +QVR+ELG+ TVLSQ
Sbjct: 133 GFVQVRSELGECRQFTVLSQ 152
>UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 69
Score = 35.5 bits (78), Expect = 0.99
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 75 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLDPSKI 221
ATQ L + +L ELL+Q Q P+ ++EQ+ I+ ++D L+ +I
Sbjct: 9 ATQNQLTKVEQLHELLQQSQSSPLTMKEQIMTIHTQTNDYLDSLEIEQI 57
>UniRef50_Q2AHD4 Cluster: Helix-hairpin-helix motif:Radical SAM;
n=1; Halothermothrix orenii H 168|Rep:
Helix-hairpin-helix motif:Radical SAM - Halothermothrix
orenii H 168
Length = 542
Score = 34.3 bits (75), Expect = 2.3
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Frame = +3
Query: 18 LAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGVRG-- 191
+A+ +E+A + L T LL + RL L P AIEE +Y G+R
Sbjct: 210 IAEVKELAQYGNHFYRLGCQTDLLLYQSTRLNGKLMPN---PDAIEE----LYRGIRKAD 262
Query: 192 ------HIDKLDPSKITAFEKEFTQHIKLATRVCSP 281
H+D ++P + +EKE Q +K TR +P
Sbjct: 263 PDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTP 298
>UniRef50_A2UKE4 Cluster: Putative uncharacterized protein; n=5;
Enterobacteriaceae|Rep: Putative uncharacterized protein
- Escherichia coli B
Length = 559
Score = 33.9 bits (74), Expect = 3.0
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = -3
Query: 254 DVLSKFLLEGSDFGGVQLVDVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCS 75
DV + E ++F + VT + L N H IL L ++ + V+ L C
Sbjct: 37 DVSQQSGFEAANFRQFNIRQVTTFCCEQNQRLLRNGHRRILFLFQQFGHFLTVVKLLTCC 96
Query: 74 GIQVRTELGKSCDLTVLSQ 18
++V +L + C T+L Q
Sbjct: 97 IVKVGCKLRERCQFTILCQ 115
>UniRef50_UPI000049A37D Cluster: hypothetical protein 6.t00086; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
6.t00086 - Entamoeba histolytica HM-1:IMSS
Length = 1539
Score = 33.5 bits (73), Expect = 4.0
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -3
Query: 218 FGGVQLVDVTADTAVNDGDLFLN--SHGHILSLLEELSKTHSSVEQLLCSGIQVRTELGK 45
+ VQL D+ ADT N G F++ S +I++L+ + + S +Q++ + I + ++
Sbjct: 896 YNTVQLFDIEADTLTNYGTTFIDSTSQTNIITLILKSGSSLHSTKQMIVNSISIEEDVET 955
Query: 44 SCDLTVLSQ 18
D +S+
Sbjct: 956 DIDQLSVSK 964
>UniRef50_Q5ZY18 Cluster: Formamidopyrimidine-DNA glycosylase (EC
3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or
apyrimidinic site) lyase mutM); n=4; Legionella
pneumophila|Rep: Formamidopyrimidine-DNA glycosylase (EC
3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or
apyrimidinic site) lyase mutM) - Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 /ATCC 33152 /
DSM 7513)
Length = 274
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 90 LNRGMRLTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLDPSKITAFEKEFTQHIK--LA 263
L +G +T + ++G+Y+ + +++ +I+ G+ GH+ + + HI LA
Sbjct: 44 LCQGKHITAITRRGKYILLHMDKGYLLIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLA 103
Query: 264 TRVCSPR 284
R C PR
Sbjct: 104 LRFCDPR 110
>UniRef50_Q00Y22 Cluster: [S] KOG4674 Uncharacterized conserved
coiled-coil protein; n=1; Ostreococcus tauri|Rep: [S]
KOG4674 Uncharacterized conserved coiled-coil protein -
Ostreococcus tauri
Length = 674
Score = 33.1 bits (72), Expect = 5.3
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 33 EVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVTIIYCGVRGHIDKLD 209
E++A + + LDA L + G RL+E L + + + +EEQV + G + ++D
Sbjct: 403 EISALKERVAHLDAQVDDLTSEGKRLSETLTKQRQIKDKLEEQVAGSEARIEGLLQEID 461
>UniRef50_Q84P69 Cluster: Fructose-6-phosphate 1-phosphotransferase;
n=7; Oryza sativa|Rep: Fructose-6-phosphate
1-phosphotransferase - Oryza sativa subsp. japonica
(Rice)
Length = 449
Score = 32.3 bits (70), Expect = 9.3
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -3
Query: 155 LNSHGHILSLLEE--LSK-THSSVEQLLCSGIQVRTELGK 45
L SH ++L L EE LSK T V +C G+Q R ELGK
Sbjct: 215 LQSHPNMLILAEEVALSKLTLMEVINKICDGVQARAELGK 254
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,226,274
Number of Sequences: 1657284
Number of extensions: 10532137
Number of successful extensions: 31306
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 30222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31302
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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