Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40109
(825 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 136 6e-31
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 118 2e-25
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 116 9e-25
UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 104 2e-21
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 104 3e-21
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 104 3e-21
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 97 4e-19
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 97 5e-19
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 95 2e-18
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 91 3e-17
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 91 4e-17
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 91 4e-17
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 89 1e-16
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 85 2e-15
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 85 2e-15
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 84 4e-15
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 84 5e-15
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 83 6e-15
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 81 3e-14
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 79 1e-13
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 77 7e-13
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 76 9e-13
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 74 4e-12
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 74 5e-12
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 73 1e-11
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 71 4e-11
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 70 8e-11
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 64 3e-09
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 64 5e-09
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 63 7e-09
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 63 9e-09
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 63 9e-09
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 62 1e-08
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 60 7e-08
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 60 9e-08
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 56 8e-07
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 56 8e-07
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 56 1e-06
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 54 3e-06
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 54 3e-06
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 54 4e-06
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 54 6e-06
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 53 8e-06
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 53 1e-05
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 52 2e-05
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 51 4e-05
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 49 2e-04
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 49 2e-04
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 48 4e-04
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 48 4e-04
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 48 4e-04
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 47 7e-04
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 46 9e-04
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 46 0.001
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 45 0.003
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 44 0.006
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 43 0.008
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 42 0.014
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 42 0.014
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 42 0.014
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 41 0.033
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 39 0.13
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 36 1.6
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 36 1.6
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 35 2.2
UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit, thr... 35 2.8
UniRef50_UPI0000D56786 Cluster: PREDICTED: similar to CG8202-PA;... 34 3.8
UniRef50_A6QS10 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 34 3.8
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 34 5.0
UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG241... 34 5.0
UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 5.0
UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like, p... 33 6.6
UniRef50_A5UNB7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 33 8.7
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 136 bits (329), Expect = 6e-31
Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Frame = +1
Query: 214 FHIYQRPK-KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 390
++I+ R + K ++ TVLG+ GCW DTL+LT ++ RMQ YEH H ++MTT AVAQML
Sbjct: 53 YNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQML 112
Query: 391 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPIT 516
S +Y +RFFPYYVSN+LAG+D++GKG VYSYDPIGHC T
Sbjct: 113 SIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKAT 154
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +2
Query: 74 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
E FP+Y VPG K F PY NGGSIVAIAGDD+AVI ADTRLS+G++I++R Q KLFKL
Sbjct: 7 EQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKL 66
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNM--QNVTEAPLPREKALALLKDVFISAAERDIYTGDS 689
+RAGG+A LQP+LDNQIG KNM ++ + L +E+A+++ D FISAAERDIYTGDS
Sbjct: 155 YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDS 214
Query: 690 IYILIITANGIQEEKFELRKD 752
+ I IIT +GI+ LR+D
Sbjct: 215 VLINIITKDGIEVRTLTLRQD 235
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 118 bits (284), Expect = 2e-25
Identities = 51/96 (53%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Frame = +1
Query: 214 FHIYQRPK-KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 390
F I+ R K ++ + TV+G +G D LTLT++++AR++MY+H +NK+MTT A+A ML
Sbjct: 61 FSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML 120
Query: 391 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
ST+LY +RFFPYYV N++ GLD +GKG VYS+DP+G
Sbjct: 121 STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 156
Score = 114 bits (274), Expect = 3e-24
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +3
Query: 513 NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSI 692
+F+AGGSA+A LQPLLDNQ+G KNMQNV PL ++A+ L+KDVFISAAERD+YTGD++
Sbjct: 162 SFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDAL 221
Query: 693 YILIITANGIQEEKFELRKD 752
I I+T GI+EE LRKD
Sbjct: 222 RICIVTKEGIREETVSLRKD 241
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +2
Query: 101 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
G Q RF PY NGG+I+AIAG+D+A++ +DTRLS GFSI+TRD K +KL
Sbjct: 24 GPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKL 74
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 116 bits (278), Expect = 9e-25
Identities = 49/96 (51%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = +1
Query: 214 FHIYQRPK-KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 390
+ I+ R K ++ ++TV+G +G D LTLT++++AR++MY+H +NKSMT+ A+A ML
Sbjct: 58 YSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAML 117
Query: 391 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
ST+LY +RFFPYYV N++ GLD +G+G VYS+DP+G
Sbjct: 118 STILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVG 153
Score = 115 bits (276), Expect = 2e-24
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 695
++AGGSA+A LQPLLDNQIG KNM+NV + PL +EKA+ L+KDVFISAAERD+YTGD++
Sbjct: 160 YKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALK 219
Query: 696 ILIITANGIQEEKFELRKD 752
I IIT GI+EE LRKD
Sbjct: 220 ICIITKEGIREEIVPLRKD 238
Score = 74.1 bits (174), Expect = 4e-12
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = +2
Query: 50 SYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR 229
S + N +Y G +H+F PYA NGG+++A+AG+D+A++ +DTRLS G+SI++R
Sbjct: 4 SAQACGANGRMKDYHYTGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSR 63
Query: 230 DQKKLFKL 253
D K +KL
Sbjct: 64 DSPKCYKL 71
>UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S
proteasome beta 6 subunit; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 20S proteasome
beta 6 subunit - Strongylocentrotus purpuratus
Length = 165
Score = 104 bits (250), Expect = 2e-21
Identities = 48/79 (60%), Positives = 64/79 (81%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 695
+RA GS++A LQPLLDNQIG KN + + P+P +KA+AL+KDVFISAAERDIYTGD I
Sbjct: 87 YRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGIV 146
Query: 696 ILIITANGIQEEKFELRKD 752
+ ++T +G +EE+F LR+D
Sbjct: 147 LHVLTKDGCKEERFPLRRD 165
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 71 NENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFK 250
+E P Y +Q RF PY NGG+I+A+AGDDYA+I +DTRLS GFSI+TRD K ++
Sbjct: 8 HETVPSYHP--VEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYR 65
Query: 251 LL 256
LL
Sbjct: 66 LL 67
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 104 bits (249), Expect = 3e-21
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K ++ + L ++G D L + L AR +Y+H+HNK M+ PA+AQ+LS LYYKRF
Sbjct: 46 KICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRF 105
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPI------GHCAPIT-SALVVPLL 540
FPYY NVL GLDS+GKGCV++YD + G+ A T SAL++P+L
Sbjct: 106 FPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVL 153
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKN--MQNVTEA--PLPREKALALLKDVFISAAERDIYTG 683
+ A G+ +A + P+LDNQ+ + + +A PL +A+ L+KDVF SA ERDIYTG
Sbjct: 139 YSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTG 198
Query: 684 DSIYILIITANGIQEEKFELRKD 752
D + I++I G + E +LRKD
Sbjct: 199 DKLEIVVINKAGTKREYIDLRKD 221
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +2
Query: 128 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICEL 50
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 104 bits (249), Expect = 3e-21
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K ++ + VL ++G D L ++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRF
Sbjct: 48 KIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRF 107
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY NVL GLD +GKGCV++YD +G
Sbjct: 108 FPYYAFNVLGGLDEEGKGCVFTYDAVG 134
Score = 66.5 bits (155), Expect = 8e-10
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
KQH + PY +NGG+ VAIAG DY VI ADTR+STG+SI +RD K+ KL
Sbjct: 3 KQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKL 52
Score = 66.5 bits (155), Expect = 8e-10
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIG----LKNMQNVTEAPLPREKALALLKDVFISAAERDIYTG 683
+ A GS + + P LDNQ+ L + + PL +A+ L+K VF SA ERDIYTG
Sbjct: 141 YGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTG 200
Query: 684 DSIYILIITANGIQEEKFELRKD 752
D + I+I+ A+GI+ E +LRKD
Sbjct: 201 DKLEIMILKADGIKTELMDLRKD 223
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 97.5 bits (232), Expect = 4e-19
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K Q+ + VL +G DT+ L + L++ ++ +E EH K M+TPA+AQ LS LYYKRF
Sbjct: 64 KIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRF 123
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY N++AG+D G+G +++YD +G
Sbjct: 124 FPYYTFNLVAGVDEQGEGWIWTYDAVG 150
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVT-EAPLPREKALALLKDVFISAAERDIYTGDSI 692
+ + GS + PLLDNQ+ N Q V + E+ ++ +KD SA ERDIYTGD
Sbjct: 157 YSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSAGERDIYTGDFA 216
Query: 693 YILIITANGIQEEKFELRKD 752
I+++ NG+ EKFEL+ D
Sbjct: 217 DIVVVDKNGVHWEKFELKLD 236
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +2
Query: 116 RFEPYADNGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLLR 259
RFE Y DNGG+++A+AG DY VI DTR+S G+ I TR K+F+L +
Sbjct: 22 RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTK 70
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 97.1 bits (231), Expect = 5e-19
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
+K Q+ + VL G D + ++ R++ YEH HNK+M ++A+M+ TMLY KR
Sbjct: 63 RKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKR 122
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FFPYYV N+L G++ DG G VYS+DP+G
Sbjct: 123 FFPYYVYNILGGIEEDGSGAVYSFDPVG 150
Score = 66.5 bits (155), Expect = 8e-10
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +2
Query: 77 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
++ ++A + H F PY+DNGGSI+AIAG D+++I DTR S G+SI TR +K+++L
Sbjct: 10 SYQDHAAGPVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQL 68
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +3
Query: 519 RAGGSAAAQLQPLLDNQIGLKNMQ-NVTEAP-----LPREKALALLKDVFISAAERDIYT 680
RA G+A + +QP LDNQ+ KN Q AP LP L+L+ D F SA ER I
Sbjct: 158 RAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLSTVLSLVVDSFTSATERHIEV 217
Query: 681 GDSIYILIITANG 719
GD + I ++ A G
Sbjct: 218 GDGMEIYVVMAKG 230
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 95.1 bits (226), Expect = 2e-18
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = +1
Query: 310 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 489
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60
Query: 490 PIG 498
+G
Sbjct: 61 AVG 63
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Frame = +1
Query: 265 VLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 444
VL G D L L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV +L
Sbjct: 91 VLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAIL 150
Query: 445 AGLDSDGKGCVYSYDPIG-----HC--APITSALVVPLL 540
AG+D DGKG +YSYDP+G +C A ++L++P L
Sbjct: 151 AGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFL 189
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 GAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
G KQH F PY DNGGS + IAG DYA++ DTR +G++I TR KLFK+
Sbjct: 27 GPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKI 78
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Frame = +3
Query: 519 RAGGSAAAQLQPLLDNQIGLKNM-------------QNVTEAPLPREKALALLKDVFISA 659
RA G+AA+ + P LDNQ+ KN Q P PR+ AL L+ D F SA
Sbjct: 176 RAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMDKQPRPSEPPPRDVALQLVNDAFTSA 235
Query: 660 AERDIYTGDSIYILIITANGIQEEKFELRKD 752
ER I GD + +++IT GIQE L+KD
Sbjct: 236 VERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 90.6 bits (215), Expect = 4e-17
Identities = 39/100 (39%), Positives = 63/100 (63%)
Frame = +1
Query: 202 QHWIFHIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVA 381
Q ++ H + K ++ + +LG +G D L L +L+ ++++Y + HN+ T A+A
Sbjct: 37 QRYLIHT-RFSTKLFKLTDKCILGTSGMQADMLALQSVLERQIELYRYTHNREPTFNAIA 95
Query: 382 QMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGH 501
Q+LST+LY +RFFPYY N+L G+D GKG V YD +G+
Sbjct: 96 QLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDAVGN 135
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 110 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
+ RF PY +NGG+++A ++YAVI ADTRLS + I+TR KLFKL
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKL 52
Score = 39.1 bits (87), Expect = 0.13
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 695
+ A G++++ + +LDN + N Q V E + L+K+ +SA ERDI TGDS
Sbjct: 141 YTAQGTSSSLVISVLDNLLNGNN-QKVKPEVNSLEDLVNLVKNAMVSAVERDICTGDSAE 199
Query: 696 ILIITANGIQEEKFELRKD 752
++I ++ +LR D
Sbjct: 200 LVICDGVVMEPVHMDLRID 218
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 90.6 bits (215), Expect = 4e-17
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +1
Query: 217 HIYQRPKKAVQII-ESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 393
+I R + +QI+ ++ +L +G + D L L ++LQ+R+ Y ++ M+ A++LS
Sbjct: 77 NILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS 136
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
LYY+RFFPYY +LAG+D GKG V+SYDPIG
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIG 171
Score = 53.6 bits (123), Expect = 6e-06
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAP-LPREKALALLKDVFISAAERDIYTGDSI 692
+ A G+A + P LD QIG + E P L ++A++L+KD F AAER+I TGD I
Sbjct: 178 YSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLMKDSFRGAAEREISTGDKI 237
Query: 693 YILIITANGIQEEKF-ELRKD 752
+++I A KF LR+D
Sbjct: 238 HLVIAEAGKPVVVKFLPLRED 258
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/47 (38%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +2
Query: 107 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLS-TGFSIYTRDQKKL 244
++ R+ PY+ GGS AI+G+++A++ +DTR++ +I TRD +K+
Sbjct: 40 ERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKI 86
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K Q+ +L +G D L + L A++++YE EHNK+ + A+AQ+LS +LY KRF
Sbjct: 77 KTCQLTNKCILACSGMLADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRF 136
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY +L+GLD GKG VY YD +G
Sbjct: 137 FPYYSFCLLSGLDEQGKGVVYGYDAVG 163
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2
Query: 101 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
G +H F PY +NGGS VA+AGDD+ VI ADTRLS + I +R K +L
Sbjct: 31 GKIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQL 81
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +3
Query: 510 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDS 689
H F A GS + + +LDNQI N + + + + ++KD SA+ERD++TGDS
Sbjct: 168 HKFVALGSGGSLITSILDNQISGNNQTSFES--IDKVGIINIVKDSITSASERDVHTGDS 225
Query: 690 IYILIITANGIQEEKFELRKD 752
+++I ++GI LR+D
Sbjct: 226 AEVIVIDSSGISVSSLRLRED 246
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/87 (44%), Positives = 53/87 (60%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K Q+ + VL G + D + L + LQ R+Q+YE ++ +T VA +LS LY +RF
Sbjct: 69 KLSQLTDKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRF 128
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY N+LAGLD + G VY YD IG
Sbjct: 129 FPYYTFNLLAGLDENNHGVVYGYDAIG 155
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +3
Query: 528 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILII 707
GS + +LDNQ+ N N T P RE+ L ++ D F AAERDI+TGD++ ILII
Sbjct: 166 GSGQELVVAVLDNQLKGYNKINKT-IPQTREEILDIILDCFSCAAERDIHTGDNVEILII 224
Query: 708 TANGIQEEKFELRKD 752
TA G + LRKD
Sbjct: 225 TAAGTERIVKPLRKD 239
Score = 46.4 bits (105), Expect = 9e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +2
Query: 107 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
K ++ PY DN G+++A+ ++ DTRLS G++I +RD KL +L
Sbjct: 25 KSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQL 73
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 85.0 bits (201), Expect = 2e-15
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K ++ ++ L +G + D L++ L AR+ MY++ + K A+A +LS LYYKRF
Sbjct: 76 KLARLTDNVFLATSGMYADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRF 135
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY N+LAG D G+G V +YD +G
Sbjct: 136 FPYYTFNLLAGFDDKGEGLVINYDAVG 162
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +2
Query: 104 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
AK++ F PY N G++ AIA D+ ++ D R+S G+SI +RD KL +L
Sbjct: 31 AKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARL 80
Score = 42.3 bits (95), Expect = 0.014
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 528 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPR-EKALALLKDVFISAAERDIYTGDSIYILI 704
GS A + P+ D + + + L E+ ++ + D F SA ERDIYTGD + I+I
Sbjct: 173 GSGAQLITPVFDQYF--EGYNKIKKEQLHTVEEFISFIVDCFESATERDIYTGDQLEIVI 230
Query: 705 ITANGIQE-EKFELRKD 752
+ + E + F LRKD
Sbjct: 231 LRKDKAPEYQLFPLRKD 247
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 84.2 bits (199), Expect = 4e-15
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 HIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLS 393
H K ++ + L ++G D L L ++L+ R+Q Y++ + K +T A+A++ S
Sbjct: 79 HTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTS 138
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAP 510
TMLY +RFFPYY N++ G+D G G YSYDP+G P
Sbjct: 139 TMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEP 177
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = +3
Query: 516 FRAG--GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDS 689
FR G GSA++ ++PLLD + ++M A L E+AL +LK+ F AAERDI+TGD+
Sbjct: 178 FRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDT 237
Query: 690 IYILIITANGIQEEKFELRKD 752
+ IITA+G+ E FELRKD
Sbjct: 238 VCFHIITADGVGTEMFELRKD 258
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Frame = +2
Query: 101 GAKQH--RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKL 253
GAK H + PY DNGG+I AIAG +Y V+GADTRL+ F I+TR D KLFKL
Sbjct: 37 GAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKL 90
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 83.8 bits (198), Expect = 5e-15
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Frame = +1
Query: 259 STVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSN 438
S V+ G D L L A + MY+++H K++ A AQ +STMLY KRFFPY +
Sbjct: 58 SIVISVIGFAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQT 117
Query: 439 VLAGLDSDGKGCVYSYDPIG------HCAP-ITSALVVPLLHS 546
++AG+D+DG+G +Y YDP G HCA S+L++P L S
Sbjct: 118 MVAGIDADGQGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDS 160
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 104 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
AK+ RF PY NGG+ + ++G D+A++ DTR + G++I TR + K+F +
Sbjct: 2 AKETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTI 51
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +3
Query: 522 AGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYIL 701
A G A++ + P LD+Q +Q PL + A L++D + A ER I GD + +L
Sbjct: 146 AAGEASSLMLPFLDSQA--PRLQ-----PLSLQTAQQLVRDAYTGATERHIEVGDHLQML 198
Query: 702 IITANGIQEEKFELRKD 752
++T G+ E+ +L+KD
Sbjct: 199 VVTREGVSEQLVDLKKD 215
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 83.4 bits (197), Expect = 6e-15
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +3
Query: 489 PYRTLCAHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 668
PY T +N AG +L P + + IG KN + + P+P +KA+AL+KDVFISAAER
Sbjct: 21 PYYT---YNILAGLDEEGEL-PTISSGIGGKNQEGWVKEPIPVDKAVALVKDVFISAAER 76
Query: 669 DIYTGDSIYILIITANGIQEEKFELRKD 752
DIYTGD I + ++T +G +EE+F LR+D
Sbjct: 77 DIYTGDGIVLHVLTKDGCKEERFPLRRD 104
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 361 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 468
M T A+A MLST+LYY+RFFPYY N+LAGLD +G+
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGE 36
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 81.0 bits (191), Expect = 3e-14
Identities = 34/87 (39%), Positives = 55/87 (63%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K + ++ ++ A G D L ++ +++Y +++NK + + A+ + MLY KRF
Sbjct: 67 KVFDVGDNILVTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRF 126
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYYV ++AGLD +GKG VYSYDP+G
Sbjct: 127 FPYYVHTIIAGLDEEGKGAVYSYDPVG 153
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +3
Query: 519 RAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYI 698
RAGGSAA+ + P LD+Q+ KN Q PL E+AL ++KD F SA ER I+ GD + I
Sbjct: 161 RAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSSATERHIHVGDGLEI 220
Query: 699 LIITANGIQEEKFELRKD 752
LI+T G+++E F L++D
Sbjct: 221 LIVTKEGVRKEFFPLKRD 238
Score = 39.1 bits (87), Expect = 0.13
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 110 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 247
+HRF PY GDD+A++ DTR +TG+SI +R Q K+F
Sbjct: 34 EHRFNPYG----------GDDFALLAGDTRNTTGYSINSRYQPKVF 69
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 8/117 (6%)
Frame = +1
Query: 214 FHIYQRP-KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 390
+ IY R K ++ + ++G++G D TL LL+ +++++ EH +A++L
Sbjct: 62 YSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLL 121
Query: 391 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-------HCAPITSALVVPLL 540
+LY +RFFPYY N+LAG+ +D KG +Y+YD IG C SAL++P+L
Sbjct: 122 CVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDAIGSYCEATHSCVGSGSALILPIL 178
Score = 60.9 bits (141), Expect = 4e-08
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 116 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
R+ PY DNGG+++ + G DY ++ ADTRLS +SIYTR K+ KL
Sbjct: 30 RWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKL 75
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +3
Query: 504 CAHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTG 683
C GS +A + P+LDN++ KN Q + L +KD SA ERDIYTG
Sbjct: 160 CEATHSCVGSGSALILPILDNRMEQKN-QLIKNLNFNLRDDLDFVKDAITSATERDIYTG 218
Query: 684 DSIYILIITANGIQEEKFELRKD 752
DS I II G+ EL++D
Sbjct: 219 DSTEIYIIDQMGVNTTSLELKQD 241
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 ESTVLGATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYV 432
++ V+ A G D L + + ++ Y +HN K ++ + A+ + +LY KRFFPYYV
Sbjct: 67 DNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYV 126
Query: 433 SNVLAGLDSDGKGCVYSYDPIG 498
++AGLD DGKG VYS+DP+G
Sbjct: 127 HTIIAGLDEDGKGAVYSFDPVG 148
Score = 66.5 bits (155), Expect = 8e-10
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Frame = +3
Query: 519 RAGGSAAAQLQPLLDNQIGLKNM-----QNVTEAPLPR---EKALALLKDVFISAAERDI 674
RAGG+AA+ + P LDNQ+ KN + PL E+ + L++D F SA ER I
Sbjct: 156 RAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHI 215
Query: 675 YTGDSIYILIITANGIQEEKFELRKD 752
GD + ILI+T +G+++E +EL++D
Sbjct: 216 QVGDGLEILIVTKDGVRKEFYELKRD 241
Score = 58.8 bits (136), Expect = 2e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 110 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 247
+H+F PY DNGG+I+ IAG+D+AV+ DTR T +SI +R + K+F
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVF 63
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 76.2 bits (179), Expect = 9e-13
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K + V +G D LT ++A ++ Y++E+ K M+T +VAQ+LS LY RF
Sbjct: 61 KIYPLTSKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRF 120
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG-------HCAPITSALVVPLLHSCNRSST 564
FPYY ++LAG++S GK Y+YD +G C+ L PLL S + T
Sbjct: 121 FPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLKDRT 176
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 NENFPEYAVPGAK-QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 247
N+ F + V AK + ++ PY DN G+ V I G+D+ VI +DTR+S + I TR+ K++
Sbjct: 4 NKMFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIY 63
Query: 248 KL 253
L
Sbjct: 64 PL 65
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 695
+ GS PLLD+ + ++ TE PL ++A+ + +DV SA ERDI+TGD++
Sbjct: 154 YSCSGSGEELAYPLLDSLL-----KDRTE-PLGEQEAINIARDVMTSACERDIHTGDNVE 207
Query: 696 ILIITANGIQEEKFELRKD 752
I+I+ +NGI++E + D
Sbjct: 208 IVILNSNGIRKEVHFMASD 226
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = +1
Query: 307 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 486
+++LQ ++Q++ EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSY
Sbjct: 120 SKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSY 179
Query: 487 DPIGH-------CAPITSALVVPLL 540
D IG C S+L++P+L
Sbjct: 180 DAIGSYYQSTHACTGSGSSLILPIL 204
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +2
Query: 56 KMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ 235
K NE E+A P R+ PY DNGG+++ + G++Y ++ DTRLS +SIYTR+
Sbjct: 14 KKTEENEAAIEHARPSK---RWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNC 70
Query: 236 KKLFKL 253
K+ K+
Sbjct: 71 PKISKI 76
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +3
Query: 528 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILII 707
GS ++ + P+LDN++ KN Q + + +KD SA ERDIYTGD I II
Sbjct: 194 GSGSSLILPILDNRVEQKN-QLIKNMDFNLRDDINFVKDAMTSATERDIYTGDKAEIYII 252
Query: 708 TANGIQEEKFELRKD 752
GI +L++D
Sbjct: 253 DNLGINTTLLDLKQD 267
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
KK +I++ + + G D TL R+++A M++YE + N S VA++LS +LY +R
Sbjct: 37 KKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYILYERR 96
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FPYY V+ GLD +G +YS DPIG
Sbjct: 97 LFPYYAEIVVGGLDEEGSH-LYSLDPIG 123
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/87 (44%), Positives = 50/87 (57%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K +I + LG TG D LTL + L+ + MYE N+ M+ A ++ST LY KRF
Sbjct: 40 KLHKIHDKLWLGLTGLIADQLTLAQKLRFKHDMYELRENRVMSPKVFASVVSTTLYEKRF 99
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
PYY V+AGLD DGK + S D IG
Sbjct: 100 QPYYTEPVVAGLDKDGKPYITSMDLIG 126
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 70.9 bits (166), Expect = 4e-11
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
+K + + V A+G D L + ++ Y + K + ++LS M+YY+R
Sbjct: 87 RKVFPVTDKIVYAASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRR 146
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FP+Y S+++AG+DS+G+G VYSYD IG
Sbjct: 147 SFPWYTSSIVAGIDSEGRGAVYSYDVIG 174
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +3
Query: 516 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 695
+ + G+ A + P+LD I KN EA + RE A L++ F S AERDIYTGDS+
Sbjct: 181 YGSAGTGNAMICPILDEAILSKN-----EAEITREFAFELIQSAFRSCAERDIYTGDSVV 235
Query: 696 ILIITANGIQEEKFELRKD 752
+ I+A+GIQE FELRKD
Sbjct: 236 AMCISADGIQERTFELRKD 254
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +2
Query: 74 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 247
+ PE + K F+PY DNGG+I+AIAG D+A+I DTRLS G++I +R+ +K+F
Sbjct: 33 KKMPEVSNAPLKDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVF 90
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 69.7 bits (163), Expect = 8e-11
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +1
Query: 265 VLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 444
++ ATG D +++ + YE++H M+ +VA+ +S LY KRFFPYY++ ++
Sbjct: 62 MISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILV 121
Query: 445 AGLDSDGKGCVYSYDPIG 498
G++S+GKG +Y YDP+G
Sbjct: 122 GGINSEGKGKLYGYDPVG 139
Score = 57.2 bits (132), Expect = 5e-07
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +2
Query: 107 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
K+ ++ PY +GG+ + I GDDY VIGADTRLS +SI +R + ++FK+
Sbjct: 9 KKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKM 57
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +3
Query: 489 PYRTLCAHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 668
P T+ ++ + GS ++ PLLD+ G + + + A +++D S ER
Sbjct: 137 PVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRDAICSVTER 196
Query: 669 DIYTGDSIYILIITANGIQEEKFEL 743
DIYTGD++ + + T +G +E+F L
Sbjct: 197 DIYTGDALQLCVFTKDGFAQEEFPL 221
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
KA ++ ES A+G D TL + ++ MY+ +K M+ ++ M+ +MLY +RF
Sbjct: 57 KAFKVTESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRF 116
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG-HCAP 510
P++V +V+AGLD+D + +D +G C P
Sbjct: 117 GPWFVDSVIAGLDTDSSPYITCFDLVGAPCTP 148
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/88 (31%), Positives = 53/88 (60%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
++ ++ +S +LG G D LT R ++ + +Y + ++ + A A+M+S+ LY R
Sbjct: 42 ERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHR 101
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
F PY++S ++AG ++DGK + + D IG
Sbjct: 102 FGPYFISPIIAGFEADGKPYLGAMDTIG 129
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
+K Q+ + T +G G D T+ +LL R++++ ++M V ++S++LY KR
Sbjct: 42 QKTFQLTDQTFVGIAGLATDVQTMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKR 101
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
F PY+ V+AGLD D + ++D IG
Sbjct: 102 FGPYFTEPVVAGLDKDHNPFLCAFDFIG 129
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/98 (30%), Positives = 54/98 (55%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K ++ T++G +G D TLT L++ + +Y + + A++ M +++LY KRF
Sbjct: 41 KVIRPSSKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRF 100
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPITSALVV 531
PY+V ++AGLD++ + YD IG C + S +
Sbjct: 101 SPYFVEPIVAGLDNNNVPFIAGYDLIG-CLSVCSEFAI 137
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 62.9 bits (146), Expect = 9e-09
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +3
Query: 528 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILII 707
GS + +QPLLD+ I KN N E L +E + L+ F SAAERD+ T D++ + ++
Sbjct: 216 GSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVCVM 275
Query: 708 TANGIQEEKFELRKD 752
N + E F LR+D
Sbjct: 276 RENQVMRETFPLRRD 290
Score = 58.8 bits (136), Expect = 2e-07
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +1
Query: 265 VLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 444
+L TG + DT + + ++ YE + S+ + A +LS +LY KRFFPYY VL
Sbjct: 131 LLTGTGFYADTHEVYVKMVYEIRQYEVDD--SINIHSAANLLSKILYSKRFFPYYSFCVL 188
Query: 445 AGLDSDGKGCVYSYDPIGHCAPIT 516
+G + GK VYSYDPIG +T
Sbjct: 189 SGFEK-GKPYVYSYDPIGSFGSVT 211
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 110 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
+ RF+PY DN G+ + + D+ V+ DTR S+ I +R+ K+F++
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQV 127
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
KK QI + + G D L R+++ +YE + T A+A + S +L R
Sbjct: 43 KKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYR 102
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+FPY V ++ G+DS+GK +YS DPIG
Sbjct: 103 YFPYLVQLLIGGIDSEGKS-IYSIDPIG 129
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 60.1 bits (139), Expect = 7e-08
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +2
Query: 110 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 244
+HRF PY+DNGG+++ IAG+D+AV+ DTR G+SI +R + K+
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKI 66
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/95 (27%), Positives = 55/95 (57%)
Frame = +1
Query: 214 FHIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 393
F I + +K +I + L G + D ++++L+A ++ Y + ++ AVA++L+
Sbjct: 33 FIISKTARKVYKITDYLGLALAGLFADLQAISKILRAEIEYYNIVTGRRISVRAVARLLA 92
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
T+LY +++P+ ++ GL++DG +Y DP+G
Sbjct: 93 TILYSYKYYPFLSETLVGGLEADGTAKLYVMDPLG 127
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K Q+ + + G G + D T+ ++ +Y + + + MLY KRF
Sbjct: 43 KVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRF 102
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
PYY+S ++AG+D +G V SYD IG
Sbjct: 103 QPYYMSPIIAGIDDNGNSYVCSYDYIG 129
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/87 (29%), Positives = 49/87 (56%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
+ ++I +LG++G D L + L+ + ++ +N + + + S++LY +RF
Sbjct: 70 RILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRF 129
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
FP+Y N+L G++ GK Y+YD IG
Sbjct: 130 FPFYTFNILTGINELGKASNYTYDAIG 156
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 VNENFPEYAVPGAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 244
+N N Y + +R F+PY +NGG ++AI G+ + V+ +DTR+S G+SI +R ++
Sbjct: 12 LNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRI 71
Query: 245 FKL 253
K+
Sbjct: 72 LKI 74
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 IYQRPKKAVQIIESTV-LGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLST 396
I R K + +I + + G + D L R+++ +M++ E K T VA+ LS+
Sbjct: 31 ILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVAKFLSS 90
Query: 397 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+LY +FFP+ V ++ G+D G+ +Y DP+G
Sbjct: 91 LLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLG 124
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 268 LGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 447
+G G D T+ + LQ R MYE N+++ + MLS +LY +RF PY+V V+A
Sbjct: 51 VGFPGLATDNQTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVA 110
Query: 448 GLD-SDGKGCVYSYDPIG 498
G+D + K V D IG
Sbjct: 111 GIDHTTSKPYVACMDLIG 128
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 268 LGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 447
+G G D T+ + L+ R+ +YE + + + + M++ +LY KRF PYY V+A
Sbjct: 51 IGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIA 110
Query: 448 GLD-SDGKGCVYSYDPIGHCAPITSALVV 531
GLD K + S D IG C +T VV
Sbjct: 111 GLDPKTFKPFICSLDLIG-CPMVTDDFVV 138
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/88 (27%), Positives = 49/88 (55%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
KK I + + + G D TL ++L+ + YE E + +T ++A++LS +++ +R
Sbjct: 40 KKVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRR 99
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
F P++ ++ G+D +G + DP+G
Sbjct: 100 FMPFFAEVLVGGIDEEGPHLIV-MDPLG 126
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
++ +I + +G +G D TL + L R ++Y+ + M A ++S +LY KR
Sbjct: 40 QRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKR 99
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
F PY+ V+AGL D + + + D IG
Sbjct: 100 FGPYFCQPVIAGLGEDNEPFICTMDCIG 127
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 53.2 bits (122), Expect = 8e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 292 DTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKG 471
DT L R ++ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK
Sbjct: 60 DTQVLLRKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKP 119
Query: 472 CVYSYDPIGHCA 507
+ D IG A
Sbjct: 120 YISGMDCIGSIA 131
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +1
Query: 217 HIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLST 396
++ + K V I ++ G + D TLTR++ ++ YE K ++ A A++LS
Sbjct: 30 YVLSKQAKKVYKINKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSV 89
Query: 397 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+LY + P+ + G+D G +Y DPIG
Sbjct: 90 ILYQYKVMPFISEILFGGVDEKGPQ-LYVLDPIG 122
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
KK ++ + +G G D T+ + R +YE N+++ +++M+S + Y R
Sbjct: 40 KKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHR 99
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
F Y+ ++AGLD K + D IG
Sbjct: 100 FGSYFTEPLVAGLDDTNKPYICCMDTIG 127
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 140 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
GG++VA+AGD+ I +D R+ + DQKK+ K+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKV 45
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K ++ + +G +G D TL LL+ R+ +YE M A MLS++LY RF
Sbjct: 43 KIFKMNDYVYVGLSGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRF 102
Query: 418 FPYYVSNVLAG------LDSDGKGCVYSYDP 492
PY+V+ ++ G LD +GK V S++P
Sbjct: 103 SPYFVNPIVVGFRVQHTLDDEGKK-VCSFEP 132
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/97 (25%), Positives = 49/97 (50%)
Frame = +1
Query: 229 RPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYY 408
+ +K ++ E ++G G D +L+ + + + K M + ++ST+LY
Sbjct: 35 KTQKIFKLHEDIIIGIVGLLGDIYGFKEILEYEISIVTKKEQKKMEPIEILSLISTLLYK 94
Query: 409 KRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPITS 519
KRF PY + ++AG +GK + + D IG + I++
Sbjct: 95 KRFNPYLLEILVAGFTENGKPFLGTVDCIGAISYISN 131
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +1
Query: 214 FHIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 393
F +++ KK QI T + G D L R ++A +++Y + +M AVA +LS
Sbjct: 33 FIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLS 92
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
ML ++ PY V ++ G+D+ V+S D G
Sbjct: 93 NMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAG 125
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +1
Query: 226 QRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 405
+R KK V + + +G D L+ +L+ +++YE + + VA +LS +L+
Sbjct: 54 RRVKKIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVASLLSNILF 113
Query: 406 YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+FFPY V ++ G D+ + +Y+ D G
Sbjct: 114 SSKFFPYIVQLIVGGYDTQPR--LYTLDLFG 142
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/88 (27%), Positives = 45/88 (51%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
+K + I + + G D + R+L+A + Y+ + MTT A+A +LS +L +
Sbjct: 38 RKIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANLLSNILNENK 97
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+FPY V ++ G + + + DP+G
Sbjct: 98 WFPYLVQIIIGGYVDE--PTIANLDPLG 123
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY--Y 408
KK +I + + G D + L++A ++YE HN+ ++ A+A M+S +L+
Sbjct: 42 KKIFRIHDYIGVTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSL 101
Query: 409 KRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
K F PY V ++ G + D +Y+ DP G
Sbjct: 102 KAFRPYLVQLIVGGFNDDDP-ALYNLDPSG 130
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 46.8 bits (106), Expect = 7e-04
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 232 PKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYK 411
PK V I + V+G TG D T + + R +MY+ + + A A ++S+MLY
Sbjct: 40 PKLHV-INDGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEA 98
Query: 412 RFFPYYVSNVLAGLD-SDGKGCVYSYDPIG-HCAP 510
RF P++V V+ +D G+ + + D IG C P
Sbjct: 99 RFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEP 133
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +1
Query: 253 IESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 432
I +T+ G+ G D L ++++A + +Y+ +N ++ A A + + +L R P YV
Sbjct: 49 IVTTIAGSVG---DAQNLMKIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYV 102
Query: 433 SNVLAGLDSDGKGCVYSYDPIG 498
+L G+D D K +YS DP G
Sbjct: 103 QTLLGGMDGD-KPSLYSLDPAG 123
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 417
K +I E + G D L L RLL+A ++Y + K M+ A+A +L+ ML R
Sbjct: 43 KIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARM 102
Query: 418 FPYYVSNVLAGLDSDGKGCVYSYDPIG 498
PY ++ G D K +YS D +G
Sbjct: 103 LPYLAWFLVGGFDE--KPRLYSVDMMG 127
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +1
Query: 253 IESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 432
I T+ G+ G D + RLL A ++Y+ +++ A A +LS +L+ R FP+
Sbjct: 47 IAMTIAGSVG---DAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLT 103
Query: 433 SNVLAGLDSDGKGCVYSYDPIG 498
++ G D ++S DP+G
Sbjct: 104 QIIIGGYDLLEGAKLFSLDPLG 125
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/105 (24%), Positives = 49/105 (46%)
Frame = +1
Query: 214 FHIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 393
F + + +K QI G D L+ + A ++ + + + + +VA+M+S
Sbjct: 28 FLVSKNTRKTFQITPYVGAACAGLVADMQILSLQISALAKIRKMDLKRDIPPNSVAKMMS 87
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPITSALV 528
M+Y +RFFP ++ G+ G+ +Y+ D +G P A V
Sbjct: 88 NMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAV 130
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/96 (25%), Positives = 49/96 (51%)
Frame = +1
Query: 226 QRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 405
+R +K + I + +L +G D + ++L+ +++ E ++M A +LS +LY
Sbjct: 30 KRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAANLLSHLLY 89
Query: 406 YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPI 513
RF+ + ++AG + + +YS D IG + I
Sbjct: 90 QNRFYLNPLGLLIAGPINSKEFGIYSLDGIGAISEI 125
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 42.3 bits (95), Expect = 0.014
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 238 KAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKR 414
K ++I +S V+ G D +++++A + ++++++K ++T A A + L Y R
Sbjct: 36 KIMKIGDSKVMMLAGPLGDRSQFSKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLR 95
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPITSAL 525
PY V ++AG+D DG ++ D + C +A+
Sbjct: 96 QSPYQVDMLIAGIDQDGPK-LFWIDYLASCTQADTAV 131
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 42.3 bits (95), Expect = 0.014
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 268 LGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 447
+G G D + + L+ ++ +YE + + + M++ LY K F PYY V+A
Sbjct: 51 IGLAGLATDVQRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIA 110
Query: 448 GLD 456
GLD
Sbjct: 111 GLD 113
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 42.3 bits (95), Expect = 0.014
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = +1
Query: 214 FHIYQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 393
F + + KK I G D L+ + A ++ + E + + VA+M+S
Sbjct: 32 FLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKMMS 91
Query: 394 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAPITSALV 528
M+Y +R+FP ++ G+ K +Y+ DP+G P A V
Sbjct: 92 NMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAV 134
>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome beta subunit -
Pyrobaculum aerophilum
Length = 202
Score = 41.1 bits (92), Expect = 0.033
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +1
Query: 223 YQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 402
++R +K +I + +G D ++ L R Y+ E+ + + A+ +S +L
Sbjct: 29 HKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRAHEYKIEYKRPIPISALVNYMSLIL 88
Query: 403 YYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
+Y R + Y V +++ G+D + +Y D +G
Sbjct: 89 FYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLG 120
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 39.1 bits (87), Expect = 0.13
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 414
+K I + +G G D + R L+ + YE + + + +A++LS +LY +
Sbjct: 49 RKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSYK 108
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
P V+ G D G +Y DP+G
Sbjct: 109 LAPLMTEVVVGGFDEKGPQ-IYVLDPVG 135
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +1
Query: 226 QRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 405
Q KK +QI + + G D R+L ++YE + + ++ ++M++ + +
Sbjct: 108 QEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFF 167
Query: 406 YKRFFPYYVSNVLAGLDSDGKGCVY 480
+ R + ++AG D DG Y
Sbjct: 168 HYRAYDLSAGIMIAGFDKDGPHLYY 192
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 223 YQRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEH-EHNKSMTTPAVAQMLSTM 399
YQ ++ ++ ++ +LG +G + D ++ R + +M + + N M ++A ++ +
Sbjct: 85 YQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRV 144
Query: 400 LYYKR--FFPYYVSNVLAGLDSDG 465
LY +R P Y+ V+ G+D++G
Sbjct: 145 LYNRRSRMNPLYIDVVVGGVDNEG 168
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 35.1 bits (77), Expect = 2.2
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +1
Query: 229 RPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYY 408
R K ++I + +GC D RLL ++Y + + ++ A +++LS M+
Sbjct: 102 RVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQ 161
Query: 409 KRFFPYYVSNVLAGLDSDGKGCVY 480
R + +++ G D G G Y
Sbjct: 162 YRGMGLSMGSMICGWDKKGPGLYY 185
>UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 107 KQHRFEPYADNGGSIVAIAGDDYAVIGAD 193
+Q + Y +NGGS VAIAG DY VI A+
Sbjct: 38 QQANWSSYNNNGGSCVAIAGADYCVITAE 66
>UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit,
threonine peptidase; n=1; Trichomonas vaginalis G3|Rep:
Family T1, proteasome beta subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 214
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +1
Query: 244 VQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKR-- 414
V++ + ++GA+G + D TL ++++ + + +HN + +T V + +Y R
Sbjct: 42 VEVAPNIIIGASGEFADFQTLIEVIKSVILQQQCKHNGEYLTASEVHNYIKRYMYQCRSN 101
Query: 415 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 498
P ++AG++ DG + DP G
Sbjct: 102 MKPLSCKVIVAGINPDGSKFLACTDPYG 129
>UniRef50_UPI0000D56786 Cluster: PREDICTED: similar to CG8202-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG8202-PA
- Tribolium castaneum
Length = 972
Score = 34.3 bits (75), Expect = 3.8
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +1
Query: 289 CDTLTLTRLLQARMQMYEHEHNKSMTT--PAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD 462
C L LTR L +Q Y E N S+ + +V MLS M + ++PY++ V +
Sbjct: 811 CSVLNLTRALLNVLQGYSWESNISLISIYLSVIDMLSVMA--QEWYPYHIDKVESNDSLY 868
Query: 463 GKGCVYSYDPIGHCAPITSALVVPL--LHSCNRSSTIKL 573
G + + C+ +T+ L+ L L C + ST +
Sbjct: 869 GSDKKFIAEINKICSVVTNELMSKLQSLGPCTKQSTFAI 907
>UniRef50_A6QS10 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 551
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 484 YDPIGHCAPITSALVVPLLHSCNRSSTIKLA 576
Y +GHC+ IT V+ L+ SCNR I LA
Sbjct: 376 YIHLGHCSNITDTAVIQLIKSCNRIRYIDLA 406
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 34.3 bits (75), Expect = 3.8
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +1
Query: 226 QRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 405
Q KK ++I + G D RLL + ++YE + + ++ A +++L+ M+Y
Sbjct: 33 QTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVY 92
Query: 406 YKRFFPYYVSNVLAGLDSDGKGCVY 480
+ + ++ G D G G Y
Sbjct: 93 QYKGMGLSMGTMICGWDKRGPGLYY 117
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 33.9 bits (74), Expect = 5.0
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +1
Query: 226 QRPKKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 405
Q KK ++I + G D RLL + ++YE + + ++ A +++L+ M+Y
Sbjct: 97 QTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVY 156
Query: 406 YKRFFPYYVSNVLAGLDSDGKGCVY 480
+ + ++ G D G G Y
Sbjct: 157 QYKGMGLSMGTMVCGWDKRGPGLYY 181
>UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG24113;
n=2; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24113 - Caenorhabditis
briggsae
Length = 388
Score = 33.9 bits (74), Expect = 5.0
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = -3
Query: 223 IYGKSSAETSVCSDNGIIIAGDGYNTTSVVRVGLETMLFRTRHSIFRKVLVNAQH 59
+YG+S+ + S GI++ D Y+T+ VVR E ++ +++ ++ +K+L++ Q+
Sbjct: 283 LYGESAIDDSTIE--GILLVADMYDTSIVVRKCEEFLMEKSKKNLKKKLLLSTQY 335
>UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 204
Score = 33.9 bits (74), Expect = 5.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 328 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 474
++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC
Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89
>UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like,
putative; n=5; Oligohymenophorea|Rep: Proteasome subunit
alpha type 7-like, putative - Tetrahymena thermophila
SB210
Length = 242
Score = 33.5 bits (73), Expect = 6.6
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +1
Query: 235 KKAVQIIESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML--YY 408
+K ++ ++T + +G D LT + + Q Y ++ + +A+ ++++ Y
Sbjct: 60 RKVQRLDDATCICYSGLTPDARILTNIAKVECQSYSLNYDDRVPINYIARYIASVQQKYT 119
Query: 409 KRFF--PYYVSNVLAGLDSDGKGCVYSYDPIGHC 504
++ P+ +S ++ G DS G+ ++ DP G C
Sbjct: 120 QKSGARPFGISTLVGGFDSKGQPRLFQTDPSGAC 153
>UniRef50_A5UNB7 Cluster: Putative uncharacterized protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Putative
uncharacterized protein - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 161
Score = 33.5 bits (73), Expect = 6.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 710 SDDQNVDGVSGINVTFCSTDEHILQKSKGLFPRQRSFCYILHIL 579
S D NVD V+ N T ST E +++++ LF F YI+ L
Sbjct: 103 SGDMNVDEVNNSNTTDNSTAEEVVEETNPLFSTSNIFIYIVVFL 146
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 33.1 bits (72), Expect = 8.7
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 140 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 253
G +IV +A +D V+GADTR + G + +D +K+ +L
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRL 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,968,239
Number of Sequences: 1657284
Number of extensions: 16942753
Number of successful extensions: 44210
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 42340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44191
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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