Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40108
(840 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 103 7e-21
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 101 2e-20
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 99 1e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 99 1e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 96 1e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 95 2e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 95 3e-18
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 94 3e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 94 3e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 93 8e-18
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 92 1e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 89 1e-16
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 87 4e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 86 1e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 83 6e-15
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 83 1e-14
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 82 1e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 80 8e-14
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 79 1e-13
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 77 4e-13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 77 6e-13
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 77 6e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 7e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 1e-12
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 75 2e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 75 2e-12
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 75 2e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 75 3e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 74 4e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 72 2e-11
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 72 2e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 71 4e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 69 1e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 68 3e-10
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 67 4e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 67 6e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 66 1e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 65 2e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 64 6e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 63 7e-09
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 62 1e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 62 1e-08
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 62 2e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 61 3e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 61 4e-08
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 60 5e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 60 5e-08
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 60 9e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 2e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 58 2e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 2e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 56 8e-07
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 56 8e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 56 1e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 1e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 1e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 56 1e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 56 1e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 54 4e-06
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 54 4e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 54 6e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 52 1e-05
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 52 2e-05
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 52 2e-05
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 52 2e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 52 2e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 52 2e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 52 2e-05
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 52 2e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 52 2e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 51 4e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 51 4e-05
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 51 4e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 50 6e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 50 1e-04
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 50 1e-04
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 49 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 49 1e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 49 1e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 49 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 48 3e-04
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 46 9e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 45 0.002
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 45 0.002
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 43 0.008
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 42 0.019
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 42 0.019
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 42 0.025
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 41 0.034
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 41 0.034
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 40 0.078
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 40 0.10
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 38 0.24
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 2.2
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 34 3.9
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 103 bits (246), Expect = 7e-21
Identities = 55/92 (59%), Positives = 62/92 (67%)
Frame = -1
Query: 276 KGGG*ESNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 97
K GG NL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 96 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYN 1
PI PG PNSARIKSL DVP +P PK+KYN
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYN 216
Score = 70.9 bits (166), Expect = 4e-11
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = -2
Query: 419 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQ 255
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +Q
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQ 132
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -3
Query: 652 NKC*YKIGSPPPAGSKNDVFKFRSVNXIVIAPAKTGSDNNNKNAVIPT 509
NKC + IGSPPPAGSK +VFKFRSV IVIAPA TGS++N+K AV T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNT 47
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 101 bits (243), Expect = 2e-20
Identities = 53/94 (56%), Positives = 63/94 (67%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
++L SV ITA AGAIT+ LTDRN+NTSFFDP+GGGDPILYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 669 PEVYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
PEVYIL + ++F ++ KKE FG LG
Sbjct: 225 PEVYILILPGFGIISHMIFNES--GKKETFGMLG 256
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 248 IRF 256
+ F
Sbjct: 84 MSF 86
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +1
Query: 310 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L +VGITAF AGAIT+ LTDRNLNTSFFDPAGGGDPILYQHLF FFGHP+
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPK 239
Query: 675 VYILNFTRIWV*FLILFPQ 731
+ + +F++ V F +LFP+
Sbjct: 240 L-MFSFSQDLVSFHMLFPK 257
Score = 86.2 bits (204), Expect = 9e-16
Identities = 45/68 (66%), Positives = 46/68 (67%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 481 FDQLPLFV 504
FDQ+PLFV
Sbjct: 175 FDQMPLFV 182
Score = 85.4 bits (202), Expect = 2e-15
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+N
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 245 NIRFDSYPPPL 277
N+ F PP L
Sbjct: 96 NMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/64 (73%), Positives = 49/64 (76%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L +VGITA AGAIT+ LTDRNLNTSFFDPAGGGDPILYQHLF FFGHPE
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPE 215
Query: 675 VYIL 686
VYIL
Sbjct: 216 VYIL 219
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 481 FDQLPLFV 504
FDQ+PLF+
Sbjct: 151 FDQMPLFI 158
Score = 83.4 bits (197), Expect = 6e-15
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 248 IRFDSYPPPL 277
+ F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 95.9 bits (228), Expect = 1e-18
Identities = 45/66 (68%), Positives = 49/66 (74%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L SV +TAF AGAIT+ LTDRN NT+FFDPAGGGDPILYQHLF FFGH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGH 243
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 244 PEVYIL 249
Score = 62.9 bits (146), Expect = 1e-08
Identities = 33/68 (48%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS +
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 181 MHRLPLFV 188
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 101 NNISFWLLPPSL 112
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 95.1 bits (226), Expect = 2e-18
Identities = 52/92 (56%), Positives = 58/92 (63%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L SV ITA A IT+ LTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 243
Query: 675 VYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
VYIL + ++ A KKEPFG +G
Sbjct: 244 VYILILPGFGMISHVVTYYA--GKKEPFGYMG 273
Score = 79.4 bits (187), Expect = 1e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 245 NIRFDSYPP 271
N+ F PP
Sbjct: 100 NMSFWLXPP 108
Score = 71.3 bits (167), Expect = 3e-11
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 481 FDQLPLFV 504
Q PLFV
Sbjct: 179 QYQTPLFV 186
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 94.7 bits (225), Expect = 3e-18
Identities = 51/92 (55%), Positives = 58/92 (63%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L SV +TA A IT+ LTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 675 VYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
VYIL + ++ A KKEPFG +G
Sbjct: 243 VYILILPGFGMISHVVTYYA--GKKEPFGYMG 272
Score = 77.0 bits (181), Expect = 6e-13
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 245 NIRFDSYPP 271
N+ F PP
Sbjct: 99 NMSFWLLPP 107
Score = 68.1 bits (159), Expect = 3e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 481 FDQLPLFV 504
Q PLFV
Sbjct: 178 QYQTPLFV 185
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 94.3 bits (224), Expect = 3e-18
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L SV ITA A IT+ LTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 675 VYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
VYIL + I+ KKEPFG +G
Sbjct: 243 VYILILPGFGMISHIV--TYYSGKKEPFGYMG 272
Score = 76.6 bits (180), Expect = 7e-13
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 245 NIRFDSYPPPL 277
N+ F PP L
Sbjct: 99 NMSFWLLPPSL 109
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMT 177
Query: 481 FDQLPLFV 504
Q PLFV
Sbjct: 178 QYQTPLFV 185
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 94.3 bits (224), Expect = 3e-18
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L +V +TA A IT+ LTDRNLNT+FFDPAGGGDPILYQHLF FFGHPE
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 675 VYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
VYIL + ++ A KKEPFG +G
Sbjct: 243 VYILILPGFGIISHVVAYYA--GKKEPFGYMG 272
Score = 77.0 bits (181), Expect = 6e-13
Identities = 37/69 (53%), Positives = 44/69 (63%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 245 NIRFDSYPP 271
N+ F PP
Sbjct: 99 NMSFWLLPP 107
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 481 FDQLPLFV 504
Q PLFV
Sbjct: 178 QYQTPLFV 185
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 93.1 bits (221), Expect = 8e-18
Identities = 44/66 (66%), Positives = 48/66 (72%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
I L S+ +TAF AGAIT+ LTDRN NTSFFD +GGGDPILYQHLF FFGH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGH 248
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 249 PEVYIL 254
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 106 NNISFWLLPPSL 117
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 481 FDQLPLFV 504
++PLFV
Sbjct: 186 MYRIPLFV 193
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L ++ +TA AGAIT+ LTDRN NTSF+DPAGGGDPILYQHLF FFGH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGH 240
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 241 PEVYIL 246
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L SV +TA+ AGAIT+ LTDRN T+FFDPAGGGDPIL+QH+F FFGH
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGH 346
Query: 669 PEVYIL 686
PEVYI+
Sbjct: 347 PEVYIV 352
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 65 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 238
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 239 INNIRFDSY 265
+NN+ + Y
Sbjct: 203 LNNLSYWMY 211
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/66 (63%), Positives = 46/66 (69%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L +V ITA AG IT+ LTDRN NTSFF+ AGGGDPILYQHLF FFGH
Sbjct: 182 LILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGH 241
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 242 PEVYIL 247
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 68 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 245 NIRF 256
NI +
Sbjct: 100 NISY 103
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L SV +T+F A AIT+ L DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 245 PEVYIL 250
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +1
Query: 304 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 242 NNIRF 256
NN F
Sbjct: 102 NNFSF 106
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 83.4 bits (197), Expect = 6e-15
Identities = 46/94 (48%), Positives = 56/94 (59%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L +V ITA A AIT+ LTDRNLNTSF++ AGGGD ILYQHLF FFGH
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGH 267
Query: 669 PEVYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
PEVYIL + ++ + + K FG LG
Sbjct: 268 PEVYILIIPGFGIISTVI---SANSNKNVFGYLG 298
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 68 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 245 NIRFDSYPPPLY 280
N+ + P L+
Sbjct: 126 NVSYWLLIPSLF 137
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L SV +TAF A AIT+ LTDRN T+F+D AGGGDP LYQHLF FFGHPE
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPE 285
Query: 675 VYIL 686
VYI+
Sbjct: 286 VYIM 289
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +1
Query: 307 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 486
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 487 QLPLFV 504
++PLFV
Sbjct: 223 KMPLFV 228
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 107 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/66 (57%), Positives = 45/66 (68%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L S+ ITAF + IT+ L DRN NTSFF+ +GGGDPILY+HLF FFGH
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGH 241
Query: 669 PEVYIL 686
PEVYIL
Sbjct: 242 PEVYIL 247
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 242 NNIRF 256
NNI F
Sbjct: 99 NNIAF 103
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.8 bits (188), Expect = 8e-14
Identities = 38/58 (65%), Positives = 41/58 (70%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
L +V ITA AGAIT+ LTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 481 FDQLPLFV 504
++PLFV
Sbjct: 97 PXRMPLFV 104
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 674
L ++ ITAF + IT+ L DRN NTSFF+ AGGGDPI YQH F FFGHPE
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPE 243
Query: 675 VYIL 686
VYIL
Sbjct: 244 VYIL 247
Score = 66.9 bits (156), Expect = 6e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 481 FDQLPLFV 504
++PLFV
Sbjct: 179 MHKMPLFV 186
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 242 NNIRF 256
N+I F
Sbjct: 99 NSIGF 103
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +3
Query: 564 ITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
IT+ LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYIL
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYIL 272
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 68 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+N
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 245 NIRFDSYPPPL 277
NI F PP L
Sbjct: 128 NISFWLLPPSL 138
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = +1
Query: 301 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 248 IRFDSYPPPL 277
+ F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/55 (65%), Positives = 39/55 (70%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF 653
++L SV ITA AGAIT+ LTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/94 (46%), Positives = 54/94 (57%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L SV ITA A +T+ L DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 669 PEVYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
PEVYIL V I+ A KK FG++G
Sbjct: 259 PEVYILIVPVFGVVSQIVQVYA---KKPIFGKIG 289
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 481 FDQLPLFV 504
+ +LPLFV
Sbjct: 196 YSKLPLFV 203
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 77 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 257 DSYPPPLYY 283
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/94 (46%), Positives = 54/94 (57%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L SV ITA A +T+ L DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 669 PEVYILNFTRIWV*FLILFPQARGTKKEPFGRLG 770
PEVYIL V I+ A KK FG++G
Sbjct: 259 PEVYILIVPVFGVVSQIVQVYA---KKPIFGKIG 289
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 481 FDQLPLFV 504
+ +LPLFV
Sbjct: 196 YSKLPLFV 203
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 77 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 257 DSYPPPLYY 283
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 76.6 bits (180), Expect = 7e-13
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+N
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMN 87
Query: 245 NIRFDSYPP 271
N+ F PP
Sbjct: 88 NMSFWLLPP 96
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 481 FDQLPLFV 504
Q PLFV
Sbjct: 167 QYQTPLFV 174
Score = 38.7 bits (86), Expect = 0.18
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3
Query: 495 LICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDP 614
L +V ITA A IT+ LTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 248 IRFDSYPPPLY 280
I F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/59 (64%), Positives = 40/59 (67%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
I L SV ITA AGAIT+ LTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 481 FDQLPLFV 504
++PLFV
Sbjct: 179 MSRIPLFV 186
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.4 bits (177), Expect = 2e-12
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A IT+ L DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+L
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVL 336
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 310 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/72 (48%), Positives = 44/72 (61%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 248 IRFDSYPPPLYY 283
+ F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 367 GRSVDLAIFSLHLAGISS 420
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +3
Query: 486 SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
S +L + ITA AG +T+ L DRN NTSF+D GGGD IL+QH+F FFG
Sbjct: 183 SWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFG 242
Query: 666 HPEVYIL 686
HPEVYI+
Sbjct: 243 HPEVYII 249
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 83 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFDS 262
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 263 Y 265
Y
Sbjct: 108 Y 108
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 304 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
E G G G T+YP L H + D +F++HL GISS
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 486 SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
S++L C S+ + + A IT+ LTD++L T F+D GGDP+LYQHLF FFG
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Query: 666 HPEVYIL 686
HPEVY++
Sbjct: 224 HPEVYVV 230
Score = 36.7 bits (81), Expect = 0.72
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 313 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.5 bits (73), Expect = 6.8
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 248 IRF 256
+ F
Sbjct: 95 LSF 97
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 245 NIRFDSYPP 271
N+ F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 72.1 bits (169), Expect = 2e-11
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILNFTRIWV*FLILFPQA 734
A +T+ L DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYIL V IL +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 735 RGTKKEPFGRLG 770
K FG++G
Sbjct: 266 --AKLHVFGKIG 275
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 310 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 37.1 bits (82), Expect = 0.55
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 248 I 250
+
Sbjct: 102 L 102
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
I++ + +T+F AG++ L DRN NTSF+D GG+P+LYQHLF FFGH
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGH 250
Query: 669 PEVYIL 686
PEVY++
Sbjct: 251 PEVYVI 256
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 242 NNIRF 256
N + F
Sbjct: 109 NALSF 113
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 70.9 bits (166), Expect = 4e-11
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF 653
+ L ++ +TA AGAIT+ LTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +3
Query: 474 YII*SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF 653
++I I+ S+ +T+F + DR+ NT FF+ + GDP+LYQHLF
Sbjct: 182 FVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLF 241
Query: 654 *FFGHPEVYILNFTRIWV*FLILFPQARGTKKEPFGR----LGNNFMANTRQFGV 806
FFGHPEVYI+ + L+L + T KE FG L F + R FG+
Sbjct: 242 WFFGHPEVYIMILPGFGIISLLL---STYTTKEMFGNQTMILAMGFNSFVRLFGL 293
Score = 40.7 bits (91), Expect = 0.045
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 68.1 bits (159), Expect = 3e-10
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
G + + L+D + NT FFDP GDPILYQHLF FFGHPEVYIL
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYIL 252
Score = 36.7 bits (81), Expect = 0.72
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 304 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 420
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 107 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 250
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +3
Query: 588 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILNFTRIWV*FLILFPQARGTKKEPFGRL 767
N T+FFDPAGGGD IL+QHLF FFGHPEVYIL + ++ + K+EPFG L
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYS--GKREPFGYL 248
Query: 768 G 770
G
Sbjct: 249 G 249
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
+ L S+ ITAF + IT+ L DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQ 241
Query: 669 PEVYIL 686
I+
Sbjct: 242 TVATII 247
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 242 NNIRF 256
NNI F
Sbjct: 99 NNIAF 103
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +3
Query: 486 SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
++ L +V TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWN 245
Query: 666 HPEVYIL 686
HPEV I+
Sbjct: 246 HPEVKII 252
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 481 FDQLPLF 501
++ +PLF
Sbjct: 184 YENVPLF 190
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 242 NNIRFDSYPPPL 277
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 63.7 bits (148), Expect = 6e-09
Identities = 34/72 (47%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 481 FDQLPLFV 504
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
+ L ++ ITA + +T+ L DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 242 NNIRF 256
NNI F
Sbjct: 99 NNIGF 103
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
I L S+ +T+F A T + DR + T FF+PA GGD +L+QHLF FFGH
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGH 256
Query: 669 PEVYIL 686
PEVYI+
Sbjct: 257 PEVYII 262
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILNFTRIWV*FLILFPQARG 740
A+ + L DRN T+FF AGG DPI +QHLF FFGHPEVY+L + + LIL P+ G
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLIL-PKFSG 317
Query: 741 TK 746
K
Sbjct: 318 RK 319
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 248 IRFDSYPP 271
I F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 486 SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
S+ L C ++ T+ A A+ + D TSFF+P GGGDP++YQHLF F+
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYS 250
Query: 666 HPEVYIL 686
HP VYI+
Sbjct: 251 HPAVYIM 257
Score = 38.7 bits (86), Expect = 0.18
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 248 IRFDSYPP 271
+ F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 102 NNISFWLLPPSL 113
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 60.9 bits (141), Expect = 4e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 683
AGA+T+ D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYV 201
Score = 41.1 bits (92), Expect = 0.034
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 80 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +3
Query: 486 SITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
+I + S+ +T+ AIT L DRN+N++ +D G DP+LYQHLF FFG
Sbjct: 192 NINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFG 249
Query: 666 HPEVYIL 686
HPEVY++
Sbjct: 250 HPEVYVI 256
Score = 33.5 bits (73), Expect = 6.8
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 319 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 420
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 107 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 665
+ L SV ITA A +T+ L DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 481 FDQLPLFV 504
+ +LPLFV
Sbjct: 196 YSKLPLFV 203
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 77 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 257 DSYPPPLYY 283
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 59.7 bits (138), Expect = 9e-08
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +3
Query: 498 ICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 677
+ +S+ +T A+ + DR+ T+FF+ A GGDPIL QHLF FFGHPEV
Sbjct: 345 VTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEV 404
Query: 678 YIL 686
Y+L
Sbjct: 405 YVL 407
Score = 37.9 bits (84), Expect = 0.31
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 242 NNIRF 256
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILNFTRIWV*FLILFP 728
G + L D + TSFF P GGGDP+L+QH F F+ HP VY+L + F LFP
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI-FSELFP 285
Score = 37.1 bits (82), Expect = 0.55
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 248 IRF 256
F
Sbjct: 123 AAF 125
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 480
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 481 FDQLPLFV 504
+ +LPLFV
Sbjct: 196 YSKLPLFV 203
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF 653
+ L SV ITA A +T+ L DRN NTSFF +GGGDP+LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 77 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 257 DSYPPPLYY 283
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 56.4 bits (130), Expect = 8e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+ + L DR L ++FFDP GG +L+QH F FGHPEVYIL
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYIL 265
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 248 IRF 256
F
Sbjct: 119 FGF 121
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 56.4 bits (130), Expect = 8e-07
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
AI + L DRN TSFF AG G IL+QHLF FFGHPEVYI+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYII 331
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 248 IRFDSYPP 271
I F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +3
Query: 576 LTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
L DR+ T FF P GGD +L+QHLF FFGHPEVYIL
Sbjct: 228 LFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYIL 264
Score = 34.7 bits (76), Expect = 2.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+R + FFDP GGDP+L+QHLF FGHPEVYI+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYII 288
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1
Query: 301 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 396
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 38.3 bits (85), Expect = 0.24
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 203 LILGAPDIAFPRINNIRFDSYPPPL 277
L+LGAPD+AFPR+NN+ F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
Score = 38.3 bits (85), Expect = 0.24
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +2
Query: 575 INRSKLKYIIF*SCWRRRPNFISTFILIFWT 667
IN K KY IF W P +STFILIFWT
Sbjct: 122 INWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYIL 686
AGAI + L +R+L FF DPA GDP L+QH+F FFGHPEVYIL
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYIL 256
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A A+ + LTDR + FF+PA GGDPI Y HLF F HPEVY+L
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVL 248
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPA-----GGGDPILYQHLF 653
+ L + +TA A + L DR+ T FF GGGDPIL+QHLF
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
Query: 654 *FFGHPEVYIL 686
FGHPEVYI+
Sbjct: 274 WIFGHPEVYIM 284
Score = 34.3 bits (75), Expect = 3.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 110 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 570 IXLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILNF 692
+ L DRNL T FF +PAGG +L+ HLF FFGHPEVYIL F
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLF 256
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 558 GAITIXLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
G + + +T NL FDPA GGDP+L+QHLF F+ HP VYI+
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIM 272
Score = 41.9 bits (94), Expect = 0.019
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +3
Query: 555 AGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYII 272
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYII 288
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 52.0 bits (119), Expect = 2e-05
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 564 ITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+ + + DR T+FF+P GG+ ++++HLF FGHPEVYIL
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYIL 255
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+T+ D+ + T FFD A GGD + YQ+LF F+ HP VY++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVI 246
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 68 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 340 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 504
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFI 126
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 242 NNIRFDSYPPPL 277
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 10/47 (21%)
Frame = +3
Query: 576 LTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYIL 686
L DR L TSFF P GGG P+L+QHLF FFGHPEVYI+
Sbjct: 240 LLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIV 286
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 576 LTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
L DR L +DPA GG +L+QHLF FFGHPEVY+L
Sbjct: 236 LYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVL 271
Score = 36.7 bits (81), Expect = 0.72
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 245 NIRF 256
F
Sbjct: 124 AFGF 127
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
G+I + L +R + FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 221 GSILLEL-ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYII 262
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A + DRN T FFD A GG P+L+QHLF F HP VY++
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVV 282
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 668
I L S+ IT AG IT+ L+DRN N FF GG PIL+Q++ FGH
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGH 73
Query: 669 PEVYIL 686
+V L
Sbjct: 74 TDVLFL 79
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 50.4 bits (115), Expect = 6e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A + L +R + S+F+PA GGDP+L+Q F F+ HP VY++
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVM 256
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+R + FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 297 ERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYII 331
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
DR FF A GDPIL+QHLF FFGHPEVYI+
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYII 268
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+ + + DR +FF+ GG + YQHLF FGHPEVYIL
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYIL 266
Score = 34.3 bits (75), Expect = 3.9
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 248 IRFDSY 265
+ Y
Sbjct: 116 FSYWIY 121
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
G+I + L +R FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 221 GSILLEL-ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYII 262
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 241
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 242 NNIRFDSYPPPL 277
NNI F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 48.8 bits (111), Expect = 2e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 606 FDPAGGGDPILYQHLF*FFGHPEVYIL 686
FDPA GGDP+L+QH F F+ HP VYI+
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIM 265
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 68 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 247
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 248 IRFDSY 265
+ F Y
Sbjct: 123 LSFYVY 128
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 310 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 420
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.5 bits (83), Expect = 0.41
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = +2
Query: 71 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 250
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 251 RFDSYPPPL 277
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/62 (43%), Positives = 32/62 (51%)
Frame = +2
Query: 587 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYS*FYQDLGIIPHIISTSKRDKKGTFWAF 766
K KYIIF S W F+STFILIFWT SLY F + + + KKG W F
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPS--KSKKGNLWVF 64
Query: 767 RE 772
+
Sbjct: 65 SD 66
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 46.4 bits (105), Expect = 9e-04
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 516 ITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 665
ITA A + + DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 666 HPEVYIL 686
HPEVYI+
Sbjct: 302 HPEVYIV 308
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 612 PAGGGDPILYQHLF*FFGHPEVYI 683
P GGG +L+QHLF FFGHPEVYI
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYI 293
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFFDP-----------AGGGDPI 635
+ L ++ ITA A + L DR + T FF P AGGG P+
Sbjct: 219 LPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPL 278
Query: 636 LYQHLF*FFGHPEVYIL 686
L+QHLF F+ HP VYI+
Sbjct: 279 LWQHLFWFYSHPAVYIM 295
Score = 36.3 bits (80), Expect = 0.96
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 104 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFDSYPPPLYY 283
+ Y +VT HA N L+PL++GA D+AFP +N + + P ++
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
GA+ + DR L+ FF GG+ ++Y +LF +GHPEVYIL
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYIL 291
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 41.9 bits (94), Expect = 0.019
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNTSFF-----------DPAGGGDPI 635
I + +S+ +T + A+ I +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 636 LYQHLF*FFGHPEVYILNFTRIWV 707
L+ HLF FFGHPEVYI+ F + V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGV 275
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 41.9 bits (94), Expect = 0.019
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+ + DR L+ F GG+P++Y +LF +GHPEVYIL
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYIL 290
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 41.5 bits (93), Expect = 0.025
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 591 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
L S F+P GG P+LYQ F F+ HP VY++
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVM 264
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.1 bits (92), Expect = 0.034
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 618 GGGDPILYQHLF*FFGHPEVYIL 686
GGG P+L+QHLF F+ HP VYI+
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIM 298
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 104 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 256
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 41.1 bits (92), Expect = 0.034
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+ + DR L T FF GG+ +LY +LF +GHPEVY +
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFV 309
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 39.9 bits (89), Expect = 0.078
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 561 AITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
A+ + DR FF GG P+L+ +LF +GHPEVYI+
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIV 286
Score = 37.5 bits (83), Expect = 0.41
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +2
Query: 65 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 244
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 245 NIRF 256
N+ F
Sbjct: 139 NLSF 142
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 39.5 bits (88), Expect = 0.10
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 582 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
DR L+T F+ GG +LY +L +GHPEVYIL
Sbjct: 251 DRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYIL 285
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 38.3 bits (85), Expect = 0.24
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 564 ITIXLT-DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
+T+ L DR L+ FF GG+ + + ++F FGHPEVYIL
Sbjct: 269 VTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYIL 310
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 489 ITLICMSVGITAFXXXXXXXXXAGAITIXLTDRNLNT 599
I+L+ S+ ITA AGAIT+ LTDRN+NT
Sbjct: 165 ISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 34.3 bits (75), Expect = 3.9
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 558 GAITIXLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 686
G + L ++ S++ GG +++++LF +FGHPEVY+L
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLL 275
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,696,876
Number of Sequences: 1657284
Number of extensions: 12653517
Number of successful extensions: 23420
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 22523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23371
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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