Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30757
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 372 e-103
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 372 e-103
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 371 e-103
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 368 e-102
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 248 4e-95
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 5e-82
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 7e-52
SB_54| Best HMM Match : Actin (HMM E-Value=0) 198 4e-51
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 171 5e-43
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 134 9e-32
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 97 2e-20
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 81 1e-15
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 66 4e-11
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 62 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 36 0.033
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.077
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 34 0.10
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.10
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.41
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.41
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.54
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.72
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 31 1.3
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.7
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.7
SB_11329| Best HMM Match : DUF1151 (HMM E-Value=0.0015) 30 1.7
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.2
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 30 2.2
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.2
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 2.9
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.8
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 29 3.8
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 3.8
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 29 3.8
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.1
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.1
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.1
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.1
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 29 5.1
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.7
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.7
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 6.7
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 6.7
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 8.9
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 8.9
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.9
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.9
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 8.9
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 8.9
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.9
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 8.9
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 372 bits (915), Expect = e-103
Identities = 188/242 (77%), Positives = 196/242 (80%), Gaps = 1/242 (0%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNWV*HGE 180
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW +
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 84
Query: 181 DLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 360
P P LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 85 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 144
Query: 361 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPP 537
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR+LTDYLMKILT + +
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 538 PSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQP 717
EIVRDIKEKLCYVALDFEQEM LEKSYELPDGQVITIGNERFRCPEA+FQP
Sbjct: 205 EREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQP 264
Query: 718 SF 723
SF
Sbjct: 265 SF 266
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 372 bits (915), Expect = e-103
Identities = 188/242 (77%), Positives = 196/242 (80%), Gaps = 1/242 (0%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNWV*HGE 180
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW +
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 181 DLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 360
P P LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 361 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPP 537
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR+LTDYLMKILT + +
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 538 PSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQP 717
EIVRDIKEKLCYVALDFEQEM LEKSYELPDGQVITIGNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQP 265
Query: 718 SF 723
SF
Sbjct: 266 SF 267
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 371 bits (913), Expect = e-103
Identities = 187/242 (77%), Positives = 196/242 (80%), Gaps = 1/242 (0%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNWV*HGE 180
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW +
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 181 DLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 360
P P LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 361 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPP 537
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGR+LTDYLMKILT + +
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 538 PSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQP 717
EIVRDIKEKLCYVALDFEQEM LEKSYELPDGQVITIGNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQP 265
Query: 718 SF 723
SF
Sbjct: 266 SF 267
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 368 bits (906), Expect = e-102
Identities = 187/242 (77%), Positives = 195/242 (80%), Gaps = 1/242 (0%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNWV*HGE 180
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW +
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 84
Query: 181 DLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 360
P P LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 85 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 144
Query: 361 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPP 537
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGR+LTDYLMKILT + +
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 538 PSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQP 717
EIVRDIKEKL YVALDFEQEM LEKSYELPDGQVITIGNERFRCPEA+FQP
Sbjct: 205 EREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQP 264
Query: 718 SF 723
SF
Sbjct: 265 SF 266
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 248 bits (607), Expect(2) = 4e-95
Identities = 121/152 (79%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Frame = +1
Query: 271 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 450
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 451 ILRLDLAGRELTDYLMKILTSAA-TRSLPPPSEIVRDIKEKLCYVALDFEQEMXXXXXXX 627
I+RLDLAGR+LTDYLMKILT + + EIVRDIKEKLCYVALDFEQEM
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 628 XLEKSYELPDGQVITIGNERFRCPEALFQPSF 723
LEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSF 229
Score = 118 bits (285), Expect(2) = 4e-95
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNW 165
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 301 bits (738), Expect = 5e-82
Identities = 167/243 (68%), Positives = 173/243 (71%), Gaps = 2/243 (0%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNWV*HGE 180
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH IVTNW +
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 181 DLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 360
P P LNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 361 SGRTTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAGRELTDYLMKILTSAATRSLP 534
SGRTTGIV+DSGDGVSHTVPIYE GY+ T+ A R
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS----------------------FTTTAER--- 180
Query: 535 PPSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALFQ 714
EIVRDIKEKLCYVALDFEQEM +EKSYELPDGQVITIGNERFRCPEAL Q
Sbjct: 181 ---EIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQ 237
Query: 715 PSF 723
PSF
Sbjct: 238 PSF 240
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 510 ERGYSFTTTAER 545
ERGYSFTTTAER
Sbjct: 169 ERGYSFTTTAER 180
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 200 bits (489), Expect = 7e-52
Identities = 110/242 (45%), Positives = 145/242 (59%), Gaps = 5/242 (2%)
Frame = +1
Query: 7 PRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNW--V*H 174
P +FPS+VGRP R + + KD VGDEA R +L + YP+++ IV NW + H
Sbjct: 28 PAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKH 87
Query: 175 GEDLASYLLQ*AACRPRGTPSPAH*GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 354
D ++ PR T LNP NREKM ++MFE + +Y+AIQAVL+L
Sbjct: 88 VWDY-TFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTL 146
Query: 355 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKI-LTSAATRSL 531
YA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGR++T YL+K+ L +
Sbjct: 147 YAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNH 206
Query: 532 PPPSEIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERFRCPEALF 711
E VR +KEKLCYV + EQE L + Y LPDG+V+ + ERF PEALF
Sbjct: 207 TADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALF 266
Query: 712 QP 717
QP
Sbjct: 267 QP 268
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 198 bits (483), Expect = 4e-51
Identities = 92/156 (58%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
Frame = +1
Query: 256 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 435
LNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY
Sbjct: 2155 LNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214
Query: 436 ALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPPPSEIVRDIKEKLCYVALDFEQEMXX 612
LPHA R+DLAGR+LT YL +++T + +I+RD+KE LCY A+D+E+E+
Sbjct: 2215 WLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKE 2274
Query: 613 XXXXXXLEKSYELPDGQVITIGNERFRCPEALFQPS 720
E Y LPDGQ I IG+ERFR E LFQPS
Sbjct: 2275 AETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPS 2310
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 158 LTGYDMEKIWHHTFYNELRVAPEEHPVLLTEA 253
+ G K+W H F ++LRV E+ PVLLTEA
Sbjct: 2123 IVGRPRHKMWEHAF-DQLRVRGEDFPVLLTEA 2153
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQ 51
++PR VFP+IVGRPRH+
Sbjct: 2114 ESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 171 bits (416), Expect = 5e-43
Identities = 83/106 (78%), Positives = 92/106 (86%), Gaps = 1/106 (0%)
Frame = +1
Query: 292 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 471
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 472 GRELTDYLMKILTSAA-TRSLPPPSEIVRDIKEKLCYVALDFEQEM 606
GR+LTDYLMK++T + + EIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 134 bits (323), Expect = 9e-32
Identities = 61/106 (57%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 435
LNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+
Sbjct: 136 LNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGF 195
Query: 436 ALPHAILRLDLAGRELTDYLMKILTSAA-TRSLPPPSEIVRDIKEK 570
A+PH+I+R D+AGR+++ YL +L EIVR IKE+
Sbjct: 196 AMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +1
Query: 337 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRELTDYLMKILTSA 516
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 517 ATRSLPPPS--EIVRDIKEKLCYVALDFEQEMXXXXXXXXLEKSYELPDGQVITIGNERF 690
+ S +IV DIKEK+CY++ D +E+ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 691 RCPEALFQP 717
E LF+P
Sbjct: 887 SSMEPLFRP 895
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 7 PRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 129
PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 722 PRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/93 (37%), Positives = 58/93 (62%)
Frame = +1
Query: 259 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 438
N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY
Sbjct: 44 NTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYV 103
Query: 439 LPHAILRLDLAGRELTDYLMKILTSAATRSLPP 537
L AI+R LAG +T ++ +PP
Sbjct: 104 LQQAIVRSPLAGDFITAQCRQMFEETNVEVIPP 136
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +1
Query: 631 LEKSYELPDGQVITIGNERFRCPEALFQPSF 723
LEK+YELPDGQVI+IGNERFRCPEA+FQP+F
Sbjct: 10 LEKTYELPDGQVISIGNERFRCPEAMFQPAF 40
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +1
Query: 304 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRE 480
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGR+
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 481 LTDYLMKILTSAATRSLPPPS--EIVRDIKEKLCYVALDFEQE 603
+T ++ ++L +PP E + IKE+ Y+ D +E
Sbjct: 98 ITFFVQQLLRE-REMGIPPEQSMETAKTIKERWGYICPDIAKE 139
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 1 DAPRAVFPSIVGRPRHQ 51
DAP+ VFP IVGRPRHQ
Sbjct: 1376 DAPKGVFPPIVGRPRHQ 1392
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 35.5 bits (78), Expect = 0.044
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Frame = +3
Query: 99 GTEQKRYPDPQ--IPHRTRNRH*LGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLP--QPQ 266
G ++ PD + RT H LG++ R P +S + P + S R P
Sbjct: 134 GVSKRTAPDHPLGVSKRTAPDHTLGVSKRTAPDHPLGLSKRTAPDHPLGVSKRTAPDHPH 193
Query: 267 GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPP 446
G + PDH + ++H P L + R+ + G+ +R PH T P
Sbjct: 194 GVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHTAP 249
Query: 447 RHPASGLSRSRA 482
HP GLS+ A
Sbjct: 250 DHP-HGLSKHTA 260
Score = 31.1 bits (67), Expect = 0.95
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Frame = +3
Query: 141 RTRNRH*LGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPQPQ--GQQREDDPDHVRNIQ- 311
RT H LG++ R P +S + P +T S R G + PDH +
Sbjct: 270 RTGPDHTLGVSKRTAPDHPLGVSKRTAPDHTLGLSKRTAPDHTLGLFKRTGPDHTHGVSK 329
Query: 312 -----HARHV--RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLS 470
H + R P L V R+ + GL +R PH T P HP G+S
Sbjct: 330 RTAPDHPLGLSKRTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGLSKSTAPDHP-HGVS 388
Query: 471 RSRAHRLPH 497
+ A PH
Sbjct: 389 KRTAPDHPH 397
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 296 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 457
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSC 385
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.077
Identities = 31/76 (40%), Positives = 35/76 (46%)
Frame = +3
Query: 327 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRAHRLPHEDP 506
RR S A R RS R R+ RRR RR R+P H S SRSR+ R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRS-RSPRR-R 268
Query: 507 HERGYSFTTTAERNRS 554
H R S T R+RS
Sbjct: 269 HSRSRSPTHRRHRSRS 284
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 277 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 438
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 439 LPHAILR 459
+ A+ R
Sbjct: 379 IKKAVRR 385
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 34.3 bits (75), Expect = 0.10
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 10/132 (7%)
Frame = +3
Query: 309 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPP----------RHPA 458
Q RRHP R R+ + G+R R P +RR RT HP
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRTRQVSQRGERERRHHPG 415
Query: 459 SGLSRSRAHRLPHEDPHERGYSFTTTAERNRS*HQGEAVLRRS*LRAGNGQRCIQQLPRE 638
+ R R ++ ER + R R+ GE+ RR+ +G + R+
Sbjct: 416 VAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGEST-RRTRKMTSSGVAICRYRTRQ 474
Query: 639 VLRTSRRSGHHY 674
V + R H+
Sbjct: 475 VSQRGERERRHH 486
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 317 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 454
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 305 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 418
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 320 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 418
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Frame = +2
Query: 371 PPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXXXXXXXXXXXLLVHYHRRAKS 550
P C+TP T+S PC T H + + + L+H H
Sbjct: 414 PDKPCYTPLTLSTKPCFRT--PHPLSQALLHIPRPFNQALLHVPHTFNQALLHSHPSPSQ 471
Query: 551 FVTSRRSCATSLLTSSRKWPALHPAAPSRSLTNFP-TVRSSLSETKDSVAQRLSSNP 718
A +LL +S PA HP +P T + + S + S A LS P
Sbjct: 472 PSPVSHPPAQALLHTSHPSPATHP-SPKPCFTFLTLSTKPCFSPSNPSPASHLSPKP 527
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 305 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 454
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 296 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 454
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 302 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 454
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 326 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 451
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 454
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +2
Query: 299 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 644 STPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +2
Query: 320 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 445
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 296 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 418
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 320 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 418
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 311 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 454
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 308 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 448
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +2
Query: 311 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 448
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 311 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 454
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 308 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 454
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 412
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 64 GMGQKDSYVGDEAQSKRGILTLKYPIEHEIVTNW 165
G+ D ++GDEA K T K+PI H IV +W
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDW 310
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 373 TGIVLDSGDGVSHTVPI 423
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 326 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 314 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 442
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 250 GSLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 384
G++ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 172 GNITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 268 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 384
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 473 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 294
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 293 IWVIFSLLALGLR 255
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 473 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 336
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 473 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 336
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 569 SCATSLLTSSRKWPALHPAAPSRSLTNFPTVRSSLSETKDSV 694
SCA S+ + AL PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 305 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 451
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 430
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 305 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 308 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 305 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 308 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 472
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 308 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 308 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 332 PSKPCSRCTRPVVPP 376
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11329| Best HMM Match : DUF1151 (HMM E-Value=0.0015)
Length = 746
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +3
Query: 180 RFGIIPSTMSCVSPPRNTQSCSLRLPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVR 359
RFG + + C R ++ S R+ + + + H + + + + R S ++ R
Sbjct: 63 RFGTVTVCLECKKSHRISRKKSHRISRKKSHRISRKKSHRISRKKSHRISREKSHRIS-R 121
Query: 360 VRSYHRYRAGLRR--RCLPHRAHLRRIRTPPRHPASGLSRSRAHRLPHEDPH 509
+S+ R R R HR ++ R + +SR ++HR+ + H
Sbjct: 122 KKSHRISRKKSHRISRKKSHRISRKKSHRISRKKSHRISRKKSHRISRKKSH 173
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 451
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 274 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 384
+E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 543 KEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 320 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 418
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 320 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 424
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 291 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 437
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.5 bits (63), Expect = 2.9
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +3
Query: 258 QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 437
+P+ + R R+ R R+ S++L RS R R+ R P+R+ R R
Sbjct: 156 RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLDRSRRS--RSRSYSRPSPSPYRSRRSRSR 213
Query: 438 TPPRHPASGLSRSRAH-RLPHEDPHERGYSFTTTAERNRS*HQGEAVLRRS*LRAGNGQR 614
T S SRSR+ R P +R S + R+R + R R G+ R
Sbjct: 214 TRRSRSRSRRSRSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSREKSRE---RGGSRGR 270
Query: 615 CIQQLPREVLRTS--RRSGHHYRKRK 686
++ P + S RRS RK K
Sbjct: 271 SAEKSPEKQRDKSDDRRSRSPERKIK 296
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +3
Query: 252 LPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRR 431
+PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 646 IPQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRV 705
Query: 432 IRTPPRHPASGLSRSR 479
+T + P+ +R++
Sbjct: 706 SQTHSQ-PSQATARTQ 720
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 627 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 713
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 627 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 713
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 253 SLSEQDWVFLGGDTQLIVEGMMPNLLHVI 167
SL++Q+W + D Q+IVEG M N ++I
Sbjct: 1332 SLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 353 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 302 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 451
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/85 (25%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Frame = +2
Query: 188 HHTFYNELRVAPEEHPVLLTEAXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSR----- 352
HH + RV H + H TRP TSP+ +R
Sbjct: 31 HHPRHTRRRVCHSRHRSTIRPMVPGGLLSMWLLERRAPTHKTRPNYTSPTTNAARIVNEG 90
Query: 353 CTRPVVP-PVSCWTPATVSPTPCPS 424
CT+P V+C P + P PS
Sbjct: 91 CTKPASEHDVTCSCPQRETTPPRPS 115
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 314 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 451
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 326 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 463
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 255 PQPQGQQREDDPDHVRNIQHARHVRRHPSR 344
P P+ R D+P V A HV HPSR
Sbjct: 266 PTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 356 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 460
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +3
Query: 327 RRHPSRA-LAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRAH-RLPHE 500
RRH R L R HR R L R R H RR R R P R R H R P
Sbjct: 156 RRHTRRPRLHTRRPRLHRRRTRLHTR--RPRLHTRRPRLHRRRPRLHTRRPRRHRRRPRL 213
Query: 501 DPHERGYS 524
H+ Y+
Sbjct: 214 HRHDLDYT 221
>SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 462 GLSRSRAHRLPHEDPHERGYSFT 530
G S + H HEDP+ERG F+
Sbjct: 8 GHSHNHGHSCQHEDPNERGNQFS 30
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 332 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 475
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 302 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 454
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 329 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 451
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 663 LTVGKFVRLLEGAAGCSAGHF 601
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 353 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 472
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 285 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 452
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 321 HVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR-TPPRHPASGLSRSRAHRLPH 497
H RR + ++ RS + R+ RR R H RR T RH + +R+H
Sbjct: 720 HTRRSSNTTRSLTRRSSNTTRSHTRRSSNTTRRHTRRSSNTTRRHTRRSSNTTRSHTRRS 779
Query: 498 EDP---HERGYSFTTTAERNRS 554
+ H R S TT + RS
Sbjct: 780 SNTTRGHTRRSSNTTRSHTRRS 801
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Frame = +3
Query: 321 HVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPR---HPASGLSRSRAHRL 491
H RR + ++ RS + R RR R+H RR R +S +RS R
Sbjct: 687 HTRRSSNTTRSLTRRSSNTTRGHTRRSSNTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRS 746
Query: 492 PHED-PHERGYSFTTTAERNRS*HQGEAVLRRS 587
+ H R S TT RS + + RRS
Sbjct: 747 SNTTRRHTRRSSNTTRRHTRRSSNTTRSHTRRS 779
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 296 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 448
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/121 (23%), Positives = 42/121 (34%)
Frame = +2
Query: 320 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXXXXX 499
P TS + S P +TP T S TP PS T S TP+ +T
Sbjct: 58 PTTSYTPTTSYTPTTSYTPTPSYTPTT-SYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSY 116
Query: 500 XXXXXXLLVHYHRRAKSFVTSRRSCATSLLTSSRKWPALHPAAPSRSLTNFPTVRSSLSE 679
+ S+ + T TS+ + + + S T+ P+ S+ S
Sbjct: 117 TPTPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSY 176
Query: 680 T 682
T
Sbjct: 177 T 177
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/124 (23%), Positives = 45/124 (36%)
Frame = +2
Query: 311 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXX 490
T P +P+ S P P + +T T S TP PS T S TP+ +T
Sbjct: 15 TSTPSYTPTT--SYTPTPSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYTPTTSYTPT 71
Query: 491 XXXXXXXXXLLVHYHRRAKSFVTSRRSCATSLLTSSRKWPALHPAAPSRSLTNFPTVRSS 670
+ S+ ++ T+ TS+ + P+ S T P+ S+
Sbjct: 72 TSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTST 131
Query: 671 LSET 682
S T
Sbjct: 132 TSYT 135
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 454
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 299 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 430
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 8.9
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +3
Query: 396 RRCLPHRAHLRRIRTPPRHPASGLSRSRAHRLPHEDPHERGYS-FTTTAERNRS*HQGEA 572
R L R+ R +R A+ RSR+H L HED ER S E +R E
Sbjct: 200 RTPLKRRSRSRSLRHEDHDDATP-RRSRSHSLRHEDEEERSPSGGRHEREDSREPSSAEE 258
Query: 573 VLRRS*LRAGNGQ-RCIQQLPREVLRTSRRSGHHYRKRK 686
R S + + R + R +SRR H RK K
Sbjct: 259 SSRTSSPHSRKKKSRKHRHRSRSSSLSSRRRSKHKRKSK 297
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 302 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 457
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 415
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 317 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 448
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 306 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTP 443
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 338 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 457
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 572 CATSLLTSSRKWPALHPAAPSRSLTNFPTVRSSLSETKDSV 694
CA ++ + ++ ALH S S ++ PT+ + S T+DSV
Sbjct: 779 CAENISSDQQESMALHTKPKSLSSSDLPTMVVTHSATRDSV 819
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 320 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 466
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,645,094
Number of Sequences: 59808
Number of extensions: 663291
Number of successful extensions: 3035
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 2213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2942
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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