Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30755
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.3  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   7.5  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 263 EEICEVLDPNFHRVNNKHKNKSVLLMSKKW 352
           +E+ +  +P  HR +  + NK+VLL S KW
Sbjct: 56  KELYQQTEPKSHRPS--YANKAVLLSSAKW 83


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 633 KMSYAVLVLWIF*FGFLGWWILYSALVNIDFVQP 532
           +M + VL+     F     WI+YSA+ + D ++P
Sbjct: 561 QMMFLVLLFAYMCFMMFFKWIMYSAVTDEDHLKP 594


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 546 LC*RERCRGSTTQETQTRISTRREQHSSFSHELG 647
           LC R   R  +  + +TR   +   HSS +H  G
Sbjct: 238 LCKRSSFRSLSMHKRRTRKQNKNPTHSSTAHMAG 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,776
Number of Sequences: 2352
Number of extensions: 13686
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)