Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30755
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g38530.1 68418.m04659 tryptophan synthase-related low similar... 31 1.1
At4g35310.1 68417.m05019 calcium-dependent protein kinase, putat... 31 1.1
At2g25520.1 68415.m03055 phosphate translocator-related low simi... 31 1.1
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g... 30 1.4
At2g17290.1 68415.m01997 calcium-dependent protein kinase isofor... 30 1.4
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 29 3.2
At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family pr... 29 4.3
At4g32390.1 68417.m04612 phosphate translocator-related low simi... 29 4.3
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 29 4.3
At2g36200.1 68415.m04444 kinesin motor protein-related 29 4.3
At2g19650.1 68415.m02296 DC1 domain-containing protein contains ... 29 4.3
At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family... 28 5.7
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 7.5
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 28 7.5
At1g29430.1 68414.m03601 auxin-responsive family protein similar... 28 7.5
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 27 9.9
>At5g38530.1 68418.m04659 tryptophan synthase-related low similarity
to tryptophan synthases, beta subunit, from Lactococcus
lactis [SP|Q01998], Pyrococcus kodakaraensis
[SP|Q9YGB0], Thermus thermophilus [SP|P16609]; contains
Pfam pyridoxal-phosphate dependent enzyme domain PF00291
Length = 506
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 529 EWLNEVYVDESAVEDPPPKKPKLEYPQDENSIAHFLMN-LVQREENEDR 672
+W N V + +V+ PPP PK P +AH N L+++E ++R
Sbjct: 70 QWYN--LVADLSVKPPPPLHPKTFEPIKPEDLAHLFPNELIKQEATQER 116
>At4g35310.1 68417.m05019 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 6 [Arabidopsis thaliana]
gi|1399275|gb|AAB03246; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 556
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 320 NKSVLLMSKKWTNIRDAYVKSLRMGRNRV-KPYIHAEALEFLDAVFVNKTKSSQKVDSRL 496
N++ ++ K NIRD Y S ++G+ + Y+ E +D + K+ S +K+ S+
Sbjct: 80 NQAYYVLGHKTPNIRDIYTLSRKLGQGQFGTTYLCTEIASGVD--YACKSISKRKLISKE 137
Query: 497 SDEDTQLKIQ 526
ED + +IQ
Sbjct: 138 DVEDVRREIQ 147
>At2g25520.1 68415.m03055 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 347
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 619 CSRLVDILVWVSWVVDPLQRSRQHRLRSTILLN-LQLRVLV*ESTVYFLGRLSFVNEHSI 443
CS L IL+ V VV+P+ SR+ LRS + + L L ++ Y +SF+ +
Sbjct: 61 CSSLAVILIKVFKVVEPVSMSRETYLRSVVPIGALYSLSLWLSNSAYIYLSVSFI--QML 118
Query: 442 KKLQSLGVY 416
K L + VY
Sbjct: 119 KALMPVAVY 127
>At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-glucan
synthase, putative similar to callose synthase 1
catalytic subunit GI:13649388 from [Arabidopsis thaliana]
Length = 1768
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 296 HRVNNKHKNKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPY 415
H+ H+ + +L + K +R AYV + +GR V+ Y
Sbjct: 1076 HKARGDHRAEEILFLMKNHDALRIAYVDEVDLGRGEVEYY 1115
>At2g17290.1 68415.m01997 calcium-dependent protein kinase isoform 6
(CPK6) identical to calmodulin-domain protein kinase
CDPK isoform 6 [Arabidopsis thaliana]
gi|1399275|gb|AAB03246; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 544
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 320 NKSVLLMSKKWTNIRDAYVKSLRMGRNRV-KPYIHAEALEFLDAVFVNKTKSSQKVDSRL 496
N+S ++ K NIRD Y S ++G+ + Y+ + +D + K+ S +K+ S+
Sbjct: 68 NQSYYVLGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVD--YACKSISKRKLISKE 125
Query: 497 SDEDTQLKIQ 526
ED + +IQ
Sbjct: 126 DVEDVRREIQ 135
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q27974
Auxilin {Bos taurus}; contains Pfam profile PF00226:
DnaJ domain
Length = 1448
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +1
Query: 475 PKSRQSTLRRGHATEDSIEWLN----EVYVDESAVEDPPPKKPKLEYPQDENSIA 627
P S Q TL H + + LN E Y E A D P P + DENS+A
Sbjct: 262 PSSFQCTLNGEHGASERLSGLNSGPSERYETEDA--DSPSSPPYFDAETDENSVA 314
>At5g46760.1 68418.m05760 basic helix-loop-helix (bHLH) family
protein
Length = 592
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 490 STLRRGHATEDSIEWLNEVYVDESAVEDPPPKKPKLEYPQDENSIAHFLMNLV---QREE 660
ST+ R A + L V E+ V +PP KKP+ + N L ++ QR E
Sbjct: 366 STVVRSAANDSDHSDLEASVVKEAIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRRE 425
Query: 661 NEDRAFFTSITSAVSSLSERSK 726
++ F+ S+ + V ++S+ K
Sbjct: 426 KLNQRFY-SLRAVVPNVSKMDK 446
>At4g32390.1 68417.m04612 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
SP|P52178 Triose phosphate/phosphate translocator,
non-green plastid, chloroplast precursor (CTPT)
{Brassica oleracea}
Length = 350
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 619 CSRLVDILVWVSWVVDPLQRSRQHRLRSTILLN-LQLRVLV*ESTVYFLGRLSFVNEHSI 443
CS L IL+ V +V+P+ SR +RS + + L L ++ Y +SF+ +
Sbjct: 61 CSSLAVILIKVFKIVEPVSMSRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFI--QML 118
Query: 442 KKLQSLGVY 416
K L + VY
Sbjct: 119 KALMPVAVY 127
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 356 NIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVNKTKSSQKVDSRLSDEDTQ 514
++ + KSL V+ Y + LE D + +NK + SQ+ + + EDT+
Sbjct: 589 DMSEQVTKSLPEEEQCVQEYGAYDKLEAQDVLTINKLEESQQTEQSVEKEDTK 641
>At2g36200.1 68415.m04444 kinesin motor protein-related
Length = 1056
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 320 NKSVLLMSKKWTNIRDAYVKSLRMGRNRVKPYIHAEALEFLDAVFVNKTKSSQKVDSRLS 499
NK++L M KK RD Y L +N V+ + A A L+ V T S+ +D L+
Sbjct: 582 NKAILEMKKKVKASRDLYSSHLEAVQNVVRLH-KANANACLEEVSALTTSSACSIDEFLA 640
Query: 500 DED 508
D
Sbjct: 641 SGD 643
>At2g19650.1 68415.m02296 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 249 CRTCSYTLYISCPTSIFFHELSRSILWLHSSLVQH 145
C C TL+ISC + + + ++ W+ + + H
Sbjct: 601 CNECGITLHISCVIDTYAYSMPGALTWIGTFVSNH 635
>At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 302
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 284 LAPHRSPPKPQPVVLVPILCTSPVPQAFSFTN 189
+ P + PP PQP+ L P P FS+TN
Sbjct: 97 IPPPQPPPPPQPLNLFSPPPPPPPPDPFSWTN 128
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 281 APHRSPPKP-QPVVLVPILCTSPVPQAFSFTN*ADQFYGFILRWYNT 144
AP PP P P VL T+P P + N +Q G + W NT
Sbjct: 189 APAPIPPSPPSPPVLTDPQDTAPAPSPNTGGNALNQLKGRAVMWLNT 235
>At1g58050.1 68414.m06579 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1417
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 263 EEICEVLDPNFHRVNNKHKNKSVLLMSKKWTNIRDAYVKSLRMGR-NRVKP 412
E++ V+D H+ N + +K + M + W + +A RMGR RVKP
Sbjct: 956 EDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANA---RQRMGRAGRVKP 1003
>At1g29430.1 68414.m03601 auxin-responsive family protein similar to
auxin-induced protein 10a 6B {SP:P33083) [Glycine max]
Length = 141
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 580 PKKPKLEYPQDENSIAHFLMNLVQREENED--RAFFTSITSAVSS 708
P + + P D ++ +L+NL+QR +ED +A SI+SA SS
Sbjct: 82 PTEGPITLPFD-SAFLEYLINLIQRRMDEDTEKALLLSISSARSS 125
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 628 HFLMNLVQREENEDRAFFTSITSAV 702
HFL+N++ ++EN A +IT+AV
Sbjct: 328 HFLVNVLMKQENAVTALAVNITAAV 352
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,028,996
Number of Sequences: 28952
Number of extensions: 307270
Number of successful extensions: 1055
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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