Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30754
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.8  

>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 356 YQLCDCLVRSIIRSCRGTTPLGSNYQSNC 442
           YQ CD L  S    C GT       Q +C
Sbjct: 197 YQFCDNLQYSFDNQCSGTIDWALPKQEDC 225


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 356 YQLCDCLVRSIIRSCRGT 409
           YQ CD L  S    C GT
Sbjct: 206 YQFCDNLQYSFDNQCSGT 223


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 427 LPVKLLMDMREHLTNVW 477
           LPV  L+ + E + N+W
Sbjct: 254 LPVDKLLQISEEVANIW 270


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 427 LPVKLLMDMREHLTNVW 477
           LPV  L+ + E + N+W
Sbjct: 252 LPVDKLLQISEEVANIW 268


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 140 ASSNPENIRAPSFSI*GTPG 81
           ASS PEN   PS  + G  G
Sbjct: 93  ASSTPENKTFPSIQVMGYQG 112


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 427 LPVKLLMDMREHLTNVW 477
           LPV  L+ + E + N+W
Sbjct: 252 LPVDKLLQISEKVANIW 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,704
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)