Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30753
         (450 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    29   2.1  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    29   2.1  
U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical ...    27   6.3  

>U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical
           protein F53A9.2 protein.
          Length = 83

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 268 GHHIGHEEHRYGHWHH 315
           GHH  H  H +GH HH
Sbjct: 62  GHHHHHHGHHFGHHHH 77



 Score = 27.1 bits (57), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 268 GHHIGHEEHRYGHWHH 315
           GHH GH  H + H HH
Sbjct: 69  GHHFGHHHHHH-HGHH 83


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 256 TDPQGHHIGHEEHRYGHWHH 315
           T P+ HH GH  H   H HH
Sbjct: 308 TTPRRHHHGHHHHGTHHHHH 327


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 256 TDPQGHHIGHEEHRYGHWHH 315
           T P+ HH GH  H   H HH
Sbjct: 308 TTPRRHHHGHHHHGTHHHHH 327


>U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical
           protein F22H10.2 protein.
          Length = 102

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 268 GHHIGHEEHRYGH 306
           GHH GH  H +GH
Sbjct: 89  GHHFGHHHHHHGH 101


>AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical
           protein R119.7 protein.
          Length = 583

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 83  GGYGQRQYVHGRNHDNHDSYPH 148
           GGYG+R+   G N  N + YP+
Sbjct: 149 GGYGRRRSAGGYNQYNQNKYPN 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,846,840
Number of Sequences: 27780
Number of extensions: 116039
Number of successful extensions: 301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)