Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30748
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 3/21 (14%)
 Frame = +1

Query: 664 DDEDSFKR---QFSKYIKLGV 717
           +D+D +K+   QFSK IKLG+
Sbjct: 418 EDKDGYKKFYEQFSKNIKLGI 438


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +3

Query: 75  QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 218
           + +FK       + +A+K +VV+DK K  + +  + + +   D  C +
Sbjct: 198 KTRFKTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCHDQLCDM 245


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 335 ADQLNMLQHNLSDQPSHHNVATHVNKQAH 249
           A Q N      ++Q  HH+   H++ Q H
Sbjct: 307 AQQQNNNNAATNNQNHHHHAGHHIHAQHH 335


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 356 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 258
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,856
Number of Sequences: 336
Number of extensions: 3983
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)