Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30746
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 48 6e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease... 47 1e-05
At2g14540.1 68415.m01628 serpin family protein / serine protease... 43 2e-04
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 43 2e-04
At1g64030.1 68414.m07252 serpin family protein / serine protease... 42 3e-04
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 42 4e-04
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 40 0.002
At2g35580.1 68415.m04357 serpin family protein / serine protease... 39 0.003
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 39 0.003
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 33 0.17
At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR ... 29 3.7
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 27 8.6
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
++N+W +T GLI ++ + +++T++I NALYFKG+W
Sbjct: 137 EVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTW 177
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 46.8 bits (106), Expect = 1e-05
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
++NAW + T GLI ++ + + +LT+ + +ALYFKG+W
Sbjct: 202 EVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTW 242
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 550 INAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
+N W + T LI I+ + + +LT I NALYFKG+W
Sbjct: 167 VNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 544 QQINAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
Q++N W + T GLI ++ + + + T + NALYFKG+W
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAW 55
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 544 QQINAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
+++N+WV T LI ++ + +LT I NAL FKG+W
Sbjct: 137 KEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAW 178
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINALTE--MIVTNALYFKGSW 669
++NAW T GLI I+ I + E +I+ NA+YFKG+W
Sbjct: 137 EVNAWAEVHTNGLIKEILSDDSIKTIRESMLILANAVYFKGAW 179
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINALTEMIVTNALYFKGSW 669
++N+W T GLI +++ + T I NALYFKG+W
Sbjct: 38 EVNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAW 78
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 544 QQINAWVNGKTKGLIPSIVDQAQINA-LTEMIVTNALYFKGSW 669
+++N+WV +T GLI +++ +A LT+ I NAL+F G W
Sbjct: 136 REVNSWVEKQTNGLITNLLPSNPKSAPLTDHIFANALFFNGRW 178
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINAL--TEMIVTNALYFKGSW 669
++N W T GLI I+ + I+ + + +++ NA+YFKG+W
Sbjct: 72 EVNTWAEVHTNGLIKQILSRDSIDTIRSSTLVLANAVYFKGAW 114
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 547 QINAWVNGKTKGLIPSIVDQAQINALTE-----MIVTNALYFKGSW 669
++N W + T GLI I+ + + + E +I+ NA+YFK +W
Sbjct: 134 EVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAW 179
>At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 885
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 624 QSVDLRLIYNRRDESFGFSVNPGVYLLCYDSVITKVHWE 508
Q + +R + R +ES G V P ++ LCY S+ WE
Sbjct: 687 QHIYIRDHWERPEESVGVLVLPAIHNLCYISIWNCWMWE 725
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 246 PSHCHFYSQPSTSANQYRRSSIGSTVLVYQDNPTSEGWRKLRQNI 112
PS HF + P TS++ RSS + + T+ KL++NI
Sbjct: 32 PSSSHFSASPVTSSSPLLRSSPSPSTSSAAASSTAVASTKLKENI 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,909,465
Number of Sequences: 28952
Number of extensions: 266537
Number of successful extensions: 735
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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